; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G09360 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09360
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description(1->3)-beta-glucan endohydrolase
Genome locationClcChr01:10359840..10361243
RNA-Seq ExpressionClc01G09360
SyntenyClc01G09360
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0046658 - anchored component of plasma membrane (cellular component)
GO:0042973 - glucan endo-1,3-beta-D-glucosidase activity (molecular function)
InterPro domainsIPR000490 - Glycoside hydrolase family 17
IPR017853 - Glycoside hydrolase superfamily
IPR044965 - Glycoside hydrolase family 17, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043333.1 glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis melo var. makuwa]6.0e-4273.44Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD
        PPS GSF+ +YLPIL  TI FL +NN  LLVNLYPYFSYV   +M  DYAIFTGTSLV DG+ NYQNLF A+LD VYS LE  GGGSLEIVVS TGWPTD
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD

Query:  GGEAATIDNARTYNNNLSQHVKQGTANK
        GGEAAT+DNARTY NNL Q VKQGT  +
Subjt:  GGEAATIDNARTYNNNLSQHVKQGTANK

XP_008459107.1 PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis melo]6.0e-4273.44Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD
        PPS GSF+ +YLPIL  TI FL +NN  LLVNLYPYFSYV   +M  DYAIFTGTSLV DG+ NYQNLF A+LD VYS LE  GGGSLEIVVS TGWPTD
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD

Query:  GGEAATIDNARTYNNNLSQHVKQGTANK
        GGEAAT+DNARTY NNL Q VKQGT  +
Subjt:  GGEAATIDNARTYNNNLSQHVKQGTANK

XP_011659353.1 glucan endo-1,3-beta-glucosidase, basic isoform-like [Cucumis sativus]5.8e-4575Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD
        PPS GSF+ NYLPIL  TI FL +NN  LL+NLYPYFSYV   NM  DYAIFTGTSLV DG+ NYQNLFDA+LD VYS LE  GGGSLE+VVS TGWPT+
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD

Query:  GGEAATIDNARTYNNNLSQHVKQGTANK
        GGEAAT+DNARTYNNNL QHVKQGT  +
Subjt:  GGEAATIDNARTYNNNLSQHVKQGTANK

XP_022139185.1 glucan endo-1,3-beta-glucosidase-like [Momordica charantia]2.6e-3765.89Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVT-ARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPT
        PPS+GSF ++YLPIL  TI FL +NN  LL+NLY YFS+++  +++  DYA+FTG S+V DGQL YQNLFDA+LD VYS LE   GG LEIVVS +GWPT
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVT-ARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPT

Query:  DGGEAATIDNARTYNNNLSQHVKQGTANK
        DGGEAA +DNARTYNNNL QHVK GT  +
Subjt:  DGGEAATIDNARTYNNNLSQHVKQGTANK

XP_038895085.1 glucan endo-1,3-beta-glucosidase, basic isoform-like [Benincasa hispida]4.0e-4676.56Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD
        PPSQGSF+TNYLPIL  T  FL +N+  LLVNLYPYFSYVT   MG DYAIFTGTSL+GDG+LNYQNLFDA+LD VYS LE  GGGSLEIVVS TGWPTD
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD

Query:  GGEAATIDNARTYNNNLSQHVKQGTANK
         G+AAT+DNARTYNNNL QHV QGT  +
Subjt:  GGEAATIDNARTYNNNLSQHVKQGTANK

TrEMBL top hitse value%identityAlignment
A0A0A0LYQ8 (1->3)-beta-glucan endohydrolase2.8e-4575Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD
        PPS GSF+ NYLPIL  TI FL +NN  LL+NLYPYFSYV   NM  DYAIFTGTSLV DG+ NYQNLFDA+LD VYS LE  GGGSLE+VVS TGWPT+
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD

Query:  GGEAATIDNARTYNNNLSQHVKQGTANK
        GGEAAT+DNARTYNNNL QHVKQGT  +
Subjt:  GGEAATIDNARTYNNNLSQHVKQGTANK

A0A1S3C9Z3 (1->3)-beta-glucan endohydrolase2.9e-4273.44Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD
        PPS GSF+ +YLPIL  TI FL +NN  LLVNLYPYFSYV   +M  DYAIFTGTSLV DG+ NYQNLF A+LD VYS LE  GGGSLEIVVS TGWPTD
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD

Query:  GGEAATIDNARTYNNNLSQHVKQGTANK
        GGEAAT+DNARTY NNL Q VKQGT  +
Subjt:  GGEAATIDNARTYNNNLSQHVKQGTANK

A0A5D3BSK7 (1->3)-beta-glucan endohydrolase2.9e-4273.44Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD
        PPS GSF+ +YLPIL  TI FL +NN  LLVNLYPYFSYV   +M  DYAIFTGTSLV DG+ NYQNLF A+LD VYS LE  GGGSLEIVVS TGWPTD
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPTD

Query:  GGEAATIDNARTYNNNLSQHVKQGTANK
        GGEAAT+DNARTY NNL Q VKQGT  +
Subjt:  GGEAATIDNARTYNNNLSQHVKQGTANK

A0A6J1CBL7 (1->3)-beta-glucan endohydrolase1.3e-3765.89Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVT-ARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPT
        PPS+GSF ++YLPIL  TI FL +NN  LL+NLY YFS+++  +++  DYA+FTG S+V DGQL YQNLFDA+LD VYS LE   GG LEIVVS +GWPT
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVT-ARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWPT

Query:  DGGEAATIDNARTYNNNLSQHVKQGTANK
        DGGEAA +DNARTYNNNL QHVK GT  +
Subjt:  DGGEAATIDNARTYNNNLSQHVKQGTANK

A0A6J1HCY3 (1->3)-beta-glucan endohydrolase4.1e-3664.66Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP
        PPS+GSF T+YLPIL  TI FL +NN  LLVN+YPYFSYV    ++  DYA+F G S  V DGQ  Y NLFDA+LD VYS LE  GG  LEIVVS TGWP
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP

Query:  TDGGEAATIDNARTYNNNLSQHVKQGTANKTRK
        T+GGEAAT++NA TYNNNL QHVK+GT  ++ K
Subjt:  TDGGEAATIDNARTYNNNLSQHVKQGTANKTRK

SwissProt top hitse value%identityAlignment
A7PQW3 Glucan endo-1,3-beta-glucosidase2.7e-2952.67Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP
        PPS+GSF+ +    +   I FL  N   LL N+YPYFSY    +N+  DYA+FT +  +V DG   YQNLFDA+LD +Y+ LE  GG +L+IVVS +GWP
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP

Query:  TDGGEAATIDNARTYNNNLSQHVKQGTANKT
        ++GG AAT+DNARTY  NL  HVK GT  K+
Subjt:  TDGGEAATIDNARTYNNNLSQHVKQGTANKT

P33157 Glucan endo-1,3-beta-glucosidase, acidic isoform2.7e-2955.22Show/hide
Query:  SPPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTSLV-GDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGW
        SPPSQG F   Y   L   I FL +    LLVNLYPYFSY+    N+  DYA+FT  S V  D   +YQNLFDA LD VY+ LE  GGGSLEIVVS TGW
Subjt:  SPPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTSLV-GDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGW

Query:  PTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK
        PT+G    +++NA+TY NNL QHVK G+  +  K
Subjt:  PTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK

P52408 Glucan endo-1,3-beta-glucosidase, basic isoform2.1e-2954.62Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP
        PPS GSF + Y  +L   I FL ++   LLVNLYPYF+Y    +++  DYA+FT  S +V DG   Y+NLFDAMLD VY+ LE  GGGSL++V+S TGWP
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP

Query:  TDGGEAATIDNARTYNNNLSQHVKQGTANK
        +  G A TIDNART+ +NL QHVK+GT  +
Subjt:  TDGGEAATIDNARTYNNNLSQHVKQGTANK

Q03773 Glucan endo-1,3-beta-glucosidase1.8e-2853.44Show/hide
Query:  PPSQGSFNTNYL-PILVLTICFLFNNNLLLLVNLYPYFSY-VTARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGW
        PPS+GSF ++Y    L   I FL NNN  L+VN+Y YF+Y    +++  DYA+F   S +V DG L Y+NLFDA +D VY+ LE  GGGSL IVVS +GW
Subjt:  PPSQGSFNTNYL-PILVLTICFLFNNNLLLLVNLYPYFSY-VTARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGW

Query:  PTDGGEAATIDNARTYNNNLSQHVKQGTANK
        P+ GG A ++DNARTYN NL ++VKQGT  +
Subjt:  PTDGGEAATIDNARTYNNNLSQHVKQGTANK

Q9M2M0 Probable glucan endo-1,3-beta-glucosidase BG11.0e-2854.81Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMG---FDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTG
        PPS+GSF  + + ++   I FL + N  LL+NLY YFSY  A N+G    DYA+FT  S +V D   +YQNLFDAMLD +YS LE  GG SLEIVV+ TG
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMG---FDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTG

Query:  WPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK
        WPT GG    I+NAR YNNNL +HVK GT  +  K
Subjt:  WPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK

Arabidopsis top hitse value%identityAlignment
AT2G01630.1 O-Glycosyl hydrolases family 17 protein1.9e-1737.59Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARN-MGFDYAIF-----TGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSG
        PPSQ  FN  + P++V  + FL +    LL+N+YPYF YV +   +  DYA+F        ++  +  L+Y N+FDA++D  Y  +      ++ IVV+ 
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARN-MGFDYAIF-----TGTSLVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSG

Query:  TGWPTDGGEA---ATIDNARTYNNNLSQHVKQGTANKTRKG
        +GWP+ GG +   AT++NA TYN+NL QHV   T      G
Subjt:  TGWPTDGGEA---ATIDNARTYNNNLSQHVKQGTANKTRKG

AT3G57240.1 beta-1,3-glucanase 31.1e-2853.08Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP
        PPS G+F   +   +   I FL +    LLVN YPYFSY    R++  DY +FT  S +V DGQ  Y+NLF A+LD VY++LE  GGGSLEIVVS +GWP
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGWP

Query:  TDGGEAATIDNARTYNNNLSQHVKQGTANK
        T GG A  +DNARTY NNL Q VK G+  +
Subjt:  TDGGEAATIDNARTYNNNLSQHVKQGTANK

AT3G57260.1 beta-1,3-glucanase 21.9e-3055.22Show/hide
Query:  SPPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTSLV-GDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGW
        SPPSQG F   Y   L   I FL +    LLVNLYPYFSY+    N+  DYA+FT  S V  D   +YQNLFDA LD VY+ LE  GGGSLEIVVS TGW
Subjt:  SPPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTSLV-GDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTGW

Query:  PTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK
        PT+G    +++NA+TY NNL QHVK G+  +  K
Subjt:  PTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK

AT3G57270.1 beta-1,3-glucanase 17.4e-3054.81Show/hide
Query:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMG---FDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTG
        PPS+GSF  + + ++   I FL + N  LL+NLY YFSY  A N+G    DYA+FT  S +V D   +YQNLFDAMLD +YS LE  GG SLEIVV+ TG
Subjt:  PPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMG---FDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGTG

Query:  WPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK
        WPT GG    I+NAR YNNNL +HVK GT  +  K
Subjt:  WPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRK

AT4G16260.1 Glycosyl hydrolase superfamily protein2.0e-2748.91Show/hide
Query:  NPSPPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGT
        N  PPS G F  +    +   I FL + N  LL N+YPYFSYV   R++   YA+FT  S +V DG   YQNLFDA+LDVVYS +E  GGGSL +VVS +
Subjt:  NPSPPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYV-TARNMGFDYAIFTGTS-LVGDGQLNYQNLFDAMLDVVYSTLENRGGGSLEIVVSGT

Query:  GWPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRKG
        GWP++GG AA+ DNAR +  NL+  V++      R G
Subjt:  GWPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCCCAGCTCCTCACTCGGTCTTGTCCCCAAGATGCTGTGGGTTTGGAAGGCCAAATCAAAGTCAGAATCCTTCCCCTCCTTCACAAGGCTCCTTCAACACCAACTA
TCTTCCAATTCTCGTACTGACCATTTGCTTTCTCTTCAACAACAACTTGTTATTGCTTGTCAACTTGTACCCTTACTTTAGTTATGTCACCGCTCGAAACATGGGATTTG
ATTATGCAATTTTTACTGGGACATCATTGGTTGGAGATGGGCAACTTAATTACCAAAACTTGTTTGATGCCATGTTGGACGTTGTTTACTCTACTTTGGAGAATCGTGGT
GGAGGATCATTGGAGATTGTTGTATCCGGGACTGGTTGGCCAACGGATGGTGGAGAGGCGGCAACGATAGACAATGCAAGGACTTACAACAACAATCTAAGTCAACATGT
GAAACAAGGGACTGCAAACAAGACAAGGAAGGGTTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCCCCAGCTCCTCACTCGGTCTTGTCCCCAAGATGCTGTGGGTTTGGAAGGCCAAATCAAAGTCAGAATCCTTCCCCTCCTTCACAAGGCTCCTTCAACACCAACTA
TCTTCCAATTCTCGTACTGACCATTTGCTTTCTCTTCAACAACAACTTGTTATTGCTTGTCAACTTGTACCCTTACTTTAGTTATGTCACCGCTCGAAACATGGGATTTG
ATTATGCAATTTTTACTGGGACATCATTGGTTGGAGATGGGCAACTTAATTACCAAAACTTGTTTGATGCCATGTTGGACGTTGTTTACTCTACTTTGGAGAATCGTGGT
GGAGGATCATTGGAGATTGTTGTATCCGGGACTGGTTGGCCAACGGATGGTGGAGAGGCGGCAACGATAGACAATGCAAGGACTTACAACAACAATCTAAGTCAACATGT
GAAACAAGGGACTGCAAACAAGACAAGGAAGGGTTATTGA
Protein sequenceShow/hide protein sequence
MSPAPHSVLSPRCCGFGRPNQSQNPSPPSQGSFNTNYLPILVLTICFLFNNNLLLLVNLYPYFSYVTARNMGFDYAIFTGTSLVGDGQLNYQNLFDAMLDVVYSTLENRG
GGSLEIVVSGTGWPTDGGEAATIDNARTYNNNLSQHVKQGTANKTRKGY