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Clc01G09620 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09620
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProline-rich protein HaeIII subfamily 1-like
Genome locationClcChr01:10955160..10955828
RNA-Seq ExpressionClc01G09620
SyntenyClc01G09620
Gene Ontology termsGO:0010227 - floral organ abscission (biological process)
InterPro domainsIPR039639 - Protein IDA-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040932.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]2.3e-4758.67Show/hide
Query:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP
        MVS+ + N+FF ACALI LGLH   Y  +AK  FV D     + NVL      HPK+   FS  KPK++PD  PP S+GILSK  RT PSG S  TS+N 
Subjt:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI
         PP PHV+  ILHK+S +NFG+LPKG RIPPSGPS+RTSD PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SDY PPPP   HAP +I
Subjt:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI

KAA0043502.1 proline-rich protein HaeIII subfamily 1-like [Cucumis melo var. makuwa]4.5e-4354.92Show/hide
Query:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP
        M+SISS N+ F  CA++LLGLH   YQ + +N F       +  N L   S  HPK++I FS  K K  P+FD     GI SK+ R  PSGPS R+SD+P
Subjt:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
        P P     S IL K+S INFG+LPKG RIPPSGPSQR SDSP P    PS  LHK S + FG+LPKG  IPPSGPS R+SD PPPPPH+P +I
Subjt:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

KAG6603169.1 hypothetical protein SDJN03_03778, partial [Cucurbita argyrosperma subsp. sororia]1.3e-4562.57Show/hide
Query:  TGKPKRVPDFDPP----SSV----------GILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHA
        +G  +R  D+ PP    SSV          G+L K     PSGPS RTS+ PPPPP H SS IL+ QS INFGMLPKG  IPPSGPSQRTSD PPPPPHA
Subjt:  TGKPKRVPDFDPP----SSV----------GILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHA

Query:  PSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNPIPPSAPSGR
         S IL+ +S INFG+LPKGV IPPSGPS R+SDYPPPPPHA  VIL  +SK+ FGM P+  PIPPS PS R
Subjt:  PSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNPIPPSAPSGR

XP_031744042.1 proline-rich receptor-like protein kinase PERK9 [Cucumis sativus]3.8e-4252.15Show/hide
Query:  FGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSST
        F  C L+LLGL    YQ +  N F  +    ++ N        HPK+HIRFS  K KR+PDFD  S  GILSK  R  PSGPS R+SD+ PPP     S 
Subjt:  FGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSST

Query:  ILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNP
        +LHK+S +NFG+LPKG     SGPSQR SDSPP PP  PS++LHKES I FGILPKGV    SGPS R SD PPPPP  P ++L KES++ FG+  +   
Subjt:  ILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNP

Query:  IPPSAPSGR
           S PS R
Subjt:  IPPSAPSGR

XP_038882352.1 uncharacterized protein LOC120073615 [Benincasa hispida]1.4e-6570.98Show/hide
Query:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP
        MVSIS  NVFFGACA I LGLH   YQ DAKN FV + G   I N LSD + KHPKRHI FS GK KR+PD  PP ++GILSKEER  PSG S  TSDN 
Subjt:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
        PPPPPHV S ILHK+S INF +L KG RIPPSGPSQRTS+SPPPPPHA SVILHK+ GINFGILPK + IPPSGPS R S+YP PP HAP VI
Subjt:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

TrEMBL top hitse value%identityAlignment
A0A5A7T8R0 Uncharacterized protein3.1e-3444.64Show/hide
Query:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPS----------
        M+S SS NV FG CALILLGLH  TY  DA++F V   G  +I N L+D   +HPKRHIRFS  KPKRVPD  PP S+GIL+K+  T PS          
Subjt:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPS----------

Query:  -----------GPSPRTSDNPPPP------------PPHVS----STILHKQSNINF-----------------GMLPKGERIPPSGPSQRTSDSPPPPP
                    P P+   +  PP            PP  +    S   H +++I F                 G+L K  R PP G SQRT D+P PPP
Subjt:  -----------GPSPRTSDNPPPP------------PPHVS----STILHKQSNINF-----------------GMLPKGERIPPSGPSQRTSDSPPPPP

Query:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS
        HA  +ILHK+S I FGILPKGVR+PPSGPS R+
Subjt:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS

A0A5D3BP86 Proline-rich protein HaeIII subfamily 1-like2.2e-4354.92Show/hide
Query:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP
        M+SISS N+ F  CA++LLGLH   YQ + +N F       +  N L   S  HPK++I FS  K K  P+FD     GI SK+ R  PSGPS R+SD+P
Subjt:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI
        P P     S IL K+S INFG+LPKG RIPPSGPSQR SDSP P    PS  LHK S + FG+LPKG  IPPSGPS R+SD PPPPPH+P +I
Subjt:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVI

A0A5D3BVE5 Uncharacterized protein2.2e-3243.78Show/hide
Query:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPS----------
        M+S SS NV FGACALILLG H  TY  DA+ F V   G  +I N L+D   +HPKRHIRFS  KPKRVPD  PP S+GIL+K+  T PS          
Subjt:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPS----------

Query:  -----------GPSPRTSDNPPPP------------PPHVS----STILHKQSNINF-----------------GMLPKGERIPPSGPSQRTSDSPPPPP
                    P P+   +  PP            PP  +    S   H +S+I F                 G+L K  R PPSG SQRT D+P  PP
Subjt:  -----------GPSPRTSDNPPPP------------PPHVS----STILHKQSNINF-----------------GMLPKGERIPPSGPSQRTSDSPPPPP

Query:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS
        H   +ILHK+S I FGILPKGV +P SGPS R+
Subjt:  HAPSVILHKESGINFGILPKGVRIPPSGPSTRS

A0A5D3CGG1 Proline-rich protein HaeIII subfamily 1-like1.1e-4758.67Show/hide
Query:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP
        MVS+ + N+FF ACALI LGLH   Y  +AK  FV D     + NVL      HPK+   FS  KPK++PD  PP S+GILSK  RT PSG S  TS+N 
Subjt:  MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNP

Query:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI
         PP PHV+  ILHK+S +NFG+LPKG RIPPSGPS+RTSD PPP  +  S+   KES I +GILPKGVRIPPSGPS R+SDY PPPP   HAP +I
Subjt:  PPPPPHVSSTILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPP---HAPFVI

A0A6J1HRH7 actin cytoskeleton-regulatory complex protein PAN1-like2.4e-4255.84Show/hide
Query:  YQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSNINFGM
        Y+ DAKN    D    I    L+D   ++PK     S+   +R      PS     G+L K     PS PS RTSD  PPPPP  SS IL+K S IN GM
Subjt:  YQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSS---VGILSKEERTTPSGPSPRTSDNPPPPPPHVSSTILHKQSNINFGM

Query:  LPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNPIPPSAPSGR
        LP+G  IPPSGPSQRTSD PPPPPHA SVIL+K+S INFG+LPKGV IPPSGPS R+S YPPPPP A  VIL K+SK+  GM PR  PIPP   S R
Subjt:  LPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNPIPPSAPSGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGGAGCTTGCGCTCTCATACTCCTTGGGCTGCACATTGCAACCTACCAAGCAGATGCTAAAAATTTTTTTGTAGACGA
CGGAGGCTTCCCTATTATCAACAACGTATTGAGTGACCCGAGTACAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTCGATC
CACCTTCCAGCGTGGGGATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCAAGAACTTCGGACAATCCACCACCTCCTCCACCGCACGTCTCGTCCACC
ATTTTGCATAAGCAATCTAACATCAACTTCGGAATGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAGCCCACCTCCCCCACCGCA
TGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTCGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCGC
CGCCTCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGGTTAAATTTGGGATGTATCCTAGAAATAACCCTATTCCACCATCTGCTCCAAGCGGACGAGTA
CCATCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCAATTAGTTCTTGTAATGTGTTTTTCGGAGCTTGCGCTCTCATACTCCTTGGGCTGCACATTGCAACCTACCAAGCAGATGCTAAAAATTTTTTTGTAGACGA
CGGAGGCTTCCCTATTATCAACAACGTATTGAGTGACCCGAGTACAAAACATCCAAAAAGGCATATCCGTTTCTCAACAGGGAAACCCAAGAGGGTACCTGACTTCGATC
CACCTTCCAGCGTGGGGATACTATCGAAAGAAGAGCGCACTACCCCGTCCGGACCGAGCCCAAGAACTTCGGACAATCCACCACCTCCTCCACCGCACGTCTCGTCCACC
ATTTTGCATAAGCAATCTAACATCAACTTCGGAATGTTACCGAAAGGTGAGCGTATTCCTCCGTCTGGGCCGAGTCAAAGAACTTCAGACAGCCCACCTCCCCCACCGCA
TGCCCCATCCGTCATTTTACACAAGGAATCTGGGATCAACTTCGGAATATTACCGAAAGGCGTGCGTATTCCACCGTCAGGGCCGAGTACAAGATCTTCGGACTATCCGC
CGCCTCCACCTCATGCTCCTTTCGTTATTTTAAAGAAAGAATCTAAGGTTAAATTTGGGATGTATCCTAGAAATAACCCTATTCCACCATCTGCTCCAAGCGGACGAGTA
CCATCATGA
Protein sequenceShow/hide protein sequence
MVSISSCNVFFGACALILLGLHIATYQADAKNFFVDDGGFPIINNVLSDPSTKHPKRHIRFSTGKPKRVPDFDPPSSVGILSKEERTTPSGPSPRTSDNPPPPPPHVSST
ILHKQSNINFGMLPKGERIPPSGPSQRTSDSPPPPPHAPSVILHKESGINFGILPKGVRIPPSGPSTRSSDYPPPPPHAPFVILKKESKVKFGMYPRNNPIPPSAPSGRV
PS