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Clc01G09735 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09735
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionWRKY domain-containing protein
Genome locationClcChr01:11040531..11044553
RNA-Seq ExpressionClc01G09735
SyntenyClc01G09735
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR003657 - WRKY domain
IPR036576 - WRKY domain superfamily
IPR044810 - WRKY transcription factor, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK13362.1 putative WRKY transcription factor 35 [Cucumis melo var. makuwa]7.9e-2874.31Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPT-PNSSKLSQDHHHKNK-------EDK
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGSSRS Q  SKNN  TTTTTT+T+T T PNSSKL    HHKNK       ED+
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPT-PNSSKLSQDHHHKNK-------EDK

Query:  EHQDQNNGT
        +H++ NNGT
Subjt:  EHQDQNNGT

XP_004134891.2 probable WRKY transcription factor 35 [Cucumis sativus]4.3e-2668.87Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKEHQ
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGSSRS Q  + N T+T TT++TT  PNSSKL    HHKNK       E+++H+
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKEHQ

Query:  DQNNGT
        + N+GT
Subjt:  DQNNGT

XP_006294231.1 probable WRKY transcription factor 35 [Capsella rubella]1.3e-2266.3Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGS+RS  S ++N++T ++T+  T T  SS++SQ++++K++ +K H
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH

XP_008439520.1 PREDICTED: probable WRKY transcription factor 35 [Cucumis melo]4.6e-2875.93Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKE
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGSSRS Q  SKNN  TTTTTTSTTT  PNSSKL    HHKNK       ED++
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKE

Query:  HQDQNNGT
        H++ NNGT
Subjt:  HQDQNNGT

XP_038881354.1 probable WRKY transcription factor 35 [Benincasa hispida]6.0e-2876.92Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQ---DHHHKNKED----KEHQ
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGSSRSQQSKNNN     T++TTT TPNSSKLS      HHKNKE+    +E Q
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQ---DHHHKNKED----KEHQ

Query:  DQNN
        DQNN
Subjt:  DQNN

TrEMBL top hitse value%identityAlignment
A0A0A0KKY7 WRKY domain-containing protein2.1e-2668.87Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKEHQ
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGSSRS Q  + N T+T TT++TT  PNSSKL    HHKNK       E+++H+
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKEHQ

Query:  DQNNGT
        + N+GT
Subjt:  DQNNGT

A0A1S3AZL1 probable WRKY transcription factor 352.2e-2875.93Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKE
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGSSRS Q  SKNN  TTTTTTSTTT  PNSSKL    HHKNK       ED++
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNK-------EDKE

Query:  HQDQNNGT
        H++ NNGT
Subjt:  HQDQNNGT

A0A5D3CPQ3 Putative WRKY transcription factor 353.8e-2874.31Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPT-PNSSKLSQDHHHKNK-------EDK
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGSSRS Q  SKNN  TTTTTT+T+T T PNSSKL    HHKNK       ED+
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQ--SKNNNITTTTTTSTTTPT-PNSSKLSQDHHHKNK-------EDK

Query:  EHQDQNNGT
        +H++ NNGT
Subjt:  EHQDQNNGT

A0A7J7C542 WRKY transcription factor 35 family protein3.5e-2162.75Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEHQDQNNGTL
        YYRCS+SKGCSARKQVE+SRT+PNMLVITYTSEHNH PWPTQRNALAGS+RSQ  K N     TTTSTT  +  SS  S  H  + KE+++    N+ + 
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEHQDQNNGTL

Query:  RL
         L
Subjt:  RL

R0HCF3 WRKY domain-containing protein6.3e-2366.3Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGS+RS  S ++N++T ++T+  T T  SS++SQ++++K++ +K H
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH

SwissProt top hitse value%identityAlignment
O04609 WRKY transcription factor 225.2e-1453.75Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSR---SQQSKNNNITTTTTTSTTTPTPNSSK
        YYRCS SKGC ARKQVE++R+DP M ++TYT+EHNH P PT RN+LAGS+R   S Q  + + TTT  T +++P  ++ +
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSR---SQQSKNNNITTTTTTSTTTPTPNSSK

O64747 Probable WRKY transcription factor 355.7e-2161.96Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGS+RS  S + N ++ ++T+  T +P SS++ Q++  K++ +  +
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH

Q9FL92 Disease resistance protein RRS1B2.5e-1657.61Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH
        YYRC++SKGC ARKQVE+SRTDPN+ VITY SEHNH P+PT RN LAGS+RS  SK +++TT+           SS +SQD   K   DK H
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH

Q9FLX8 Probable WRKY transcription factor 275.3e-1146.07Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKED
        YYRCS+SKGC ARKQVE+S  DPN+ ++TYT EH H P PT RN+LAGS+R++    N +    T+  +        LS     K  +D
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKED

Q9SA80 Probable WRKY transcription factor 147.0e-1964.63Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDH
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWP QRNALAGS+RS  S ++N      +  +T   NSS +   +
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDH

Arabidopsis top hitse value%identityAlignment
AT1G30650.1 WRKY DNA-binding protein 144.9e-2064.63Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDH
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWP QRNALAGS+RS  S ++N      +  +T   NSS +   +
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDH

AT2G34830.1 WRKY DNA-binding protein 354.0e-2261.96Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH
        YYRCS+SKGCSARKQVE+SRTDPNMLVITYTSEHNH PWPTQRNALAGS+RS  S + N ++ ++T+  T +P SS++ Q++  K++ +  +
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH

AT4G01250.1 WRKY family transcription factor3.7e-1553.75Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSR---SQQSKNNNITTTTTTSTTTPTPNSSK
        YYRCS SKGC ARKQVE++R+DP M ++TYT+EHNH P PT RN+LAGS+R   S Q  + + TTT  T +++P  ++ +
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSR---SQQSKNNNITTTTTTSTTTPTPNSSK

AT5G45050.1 Disease resistance protein (TIR-NBS-LRR class)1.8e-1757.61Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH
        YYRC++SKGC ARKQVE+SRTDPN+ VITY SEHNH P+PT RN LAGS+RS  SK +++TT+           SS +SQD   K   DK H
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH

AT5G45050.2 Disease resistance protein (TIR-NBS-LRR class)1.8e-1757.61Show/hide
Query:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH
        YYRC++SKGC ARKQVE+SRTDPN+ VITY SEHNH P+PT RN LAGS+RS  SK +++TT+           SS +SQD   K   DK H
Subjt:  YYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTTTTSTTTPTPNSSKLSQDHHHKNKEDKEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCGAGGGTTGCTTGAAGGCATTGAGGAACATGATATTCCAATGCCAAGGGACTTTTGAGAAGACATTAATGACGGTCAAAACTGGGATCAGAACTCGTTACCACAT
AGGATGCTTTGTACATCAATCAACACAGTACTATAGATGCAGCAACTCAAAGGGATGTTCAGCAAGAAAACAAGTGGAGAAAAGTAGAACAGATCCAAACATGCTGGTGA
TTACTTACACATCTGAGCATAACCATCGTCCATGGCCAACTCAAAGAAATGCTCTTGCTGGTTCTTCAAGATCCCAACAATCCAAAAATAACAACATTACTACTACTACT
ACTACTTCAACAACAACACCAACACCCAATTCTTCAAAACTCTCTCAAGATCATCATCATAAAAATAAGGAAGATAAAGAACATCAAGATCAAAACAATGGAACATTAAG
GCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCGAGGGTTGCTTGAAGGCATTGAGGAACATGATATTCCAATGCCAAGGGACTTTTGAGAAGACATTAATGACGGTCAAAACTGGGATCAGAACTCGTTACCACAT
AGGATGCTTTGTACATCAATCAACACAGTACTATAGATGCAGCAACTCAAAGGGATGTTCAGCAAGAAAACAAGTGGAGAAAAGTAGAACAGATCCAAACATGCTGGTGA
TTACTTACACATCTGAGCATAACCATCGTCCATGGCCAACTCAAAGAAATGCTCTTGCTGGTTCTTCAAGATCCCAACAATCCAAAAATAACAACATTACTACTACTACT
ACTACTTCAACAACAACACCAACACCCAATTCTTCAAAACTCTCTCAAGATCATCATCATAAAAATAAGGAAGATAAAGAACATCAAGATCAAAACAATGGAACATTAAG
GCTCTAG
Protein sequenceShow/hide protein sequence
MLEGCLKALRNMIFQCQGTFEKTLMTVKTGIRTRYHIGCFVHQSTQYYRCSNSKGCSARKQVEKSRTDPNMLVITYTSEHNHRPWPTQRNALAGSSRSQQSKNNNITTTT
TTSTTTPTPNSSKLSQDHHHKNKEDKEHQDQNNGTLRL