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Clc01G09850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
Genome locationClcChr01:11395050..11397753
RNA-Seq ExpressionClc01G09850
SyntenyClc01G09850
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151321.1 protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]4.7e-5760.51Show/hide
Query:  PYDPHFRADVPVN-VNDNKFTIYPRALNITWGNDKRYWNLPRR----DPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSV
        P DPHFRA   VN + ++ F IYPRALNITWG+D+RYW +PRR    D + E+ FAELKQVCWLEVTGST +++VP K YKV F VSL PDAFGWDDCSV
Subjt:  PYDPHFRADVPVN-VNDNKFTIYPRALNITWGNDKRYWNLPRR----DPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSV

Query:  YIMAKIGKKGSFSFKKISLA--GKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQS
        YIMAKIGKKG+F F+K++L      TD     IP  +  LT+ V  P+    + NDDL LYFGLY+VWTNRWKGGLRIH+A VE V  ++  TQ+
Subjt:  YIMAKIGKKGSFSFKKISLA--GKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQS

XP_008459053.1 PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]2.6e-6063.54Show/hide
Query:  MPYDPHFRADVPVNV-NDNKFTIYPRALNITWGNDKRYWNLPRRDP----KKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS
        +P DPHFRA+  V   +DNKF +YPRALNITWGND+RYW +P RDP    K E  FAELKQVCWLEVTGS +K++VPGK YK  F VSL PDAFGWDDCS
Subjt:  MPYDPHFRADVPVNV-NDNKFTIYPRALNITWGNDKRYWNLPRRDP----KKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS

Query:  VYIMAKIGKKGSFSFKKISLAGKP---TDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTD
        VYIMAKIGKKG F  KK++L   P   TD+    IP   D L ++V     P    +DDLNLYFGLYEVWTNRWKGGLRIH+A VE V   D
Subjt:  VYIMAKIGKKGSFSFKKISLAGKP---TDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTD

XP_022142573.1 protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Momordica charantia]4.0e-4857.92Show/hide
Query:  YDPHFRADVPVNVND--NKFTIYPRALNITWGNDKRYWNLP-----RRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS
        + PH++ +    + D  NKF +YPR LNITWG D RYW LP     R D   E+  AELKQV WLEVTGST K+VV GKEYKVGF VSLRPDAFGW+   
Subjt:  YDPHFRADVPVNVND--NKFTIYPRALNITWGNDKRYWNLP-----RRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS

Query:  VYIMAKIGKKGSFSFKKISLAGKPTDL-TKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFV
        VYIMAKIGK+G+ SFKK++  GK   +   F IP  +DKL I V   +   PS  DD  LYFG+YEVW+  WKGGL+IHHAFV
Subjt:  VYIMAKIGKKGSFSFKKISLAGKPTDL-TKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFV

XP_022994899.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita maxima]2.6e-4758.43Show/hide
Query:  DPHFRADVPVNV---NDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMA
        +PH RA+   N+     NKF IYPR L+ITWGND RYW L   D + E+ FAELKQV WLEVTGST K +  G  +KV F V+LRP+AFGWD+C+VYIMA
Subjt:  DPHFRADVPVNV---NDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMA

Query:  KIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE
        KIGKKG +SFKK++L  K  +  +F IP+++  L IKV  PK       +DL LYFG+YEVW+NRWKGGLRI+HA VE
Subjt:  KIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE

XP_038896030.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]1.0e-6771.51Show/hide
Query:  MPYDPHFRADVPV-NVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIM
        M  DPHF+AD P+ N+ +NKF IYPRALNITWG DKR+WNLP RD + E+ FAELKQVCWLEVTGSTEK+V+  ++YKVGFV+SLRPDAFGWDDCSVYIM
Subjt:  MPYDPHFRADVPV-NVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIM

Query:  AKIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE
        AKIG++G++SFKK+SLA  PT   + TIP DDD+L I+V   K     +NDDL LYFGLYEVWTNRWKGGLRIHHAFVE
Subjt:  AKIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE

TrEMBL top hitse value%identityAlignment
A0A0A0M0X5 Uncharacterized protein2.3e-5760.51Show/hide
Query:  PYDPHFRADVPVN-VNDNKFTIYPRALNITWGNDKRYWNLPRR----DPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSV
        P DPHFRA   VN + ++ F IYPRALNITWG+D+RYW +PRR    D + E+ FAELKQVCWLEVTGST +++VP K YKV F VSL PDAFGWDDCSV
Subjt:  PYDPHFRADVPVN-VNDNKFTIYPRALNITWGNDKRYWNLPRR----DPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSV

Query:  YIMAKIGKKGSFSFKKISLA--GKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQS
        YIMAKIGKKG+F F+K++L      TD     IP  +  LT+ V  P+    + NDDL LYFGLY+VWTNRWKGGLRIH+A VE V  ++  TQ+
Subjt:  YIMAKIGKKGSFSFKKISLA--GKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQS

A0A1S3C8T6 protein PHLOEM PROTEIN 2-LIKE A9-like1.3e-6063.54Show/hide
Query:  MPYDPHFRADVPVNV-NDNKFTIYPRALNITWGNDKRYWNLPRRDP----KKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS
        +P DPHFRA+  V   +DNKF +YPRALNITWGND+RYW +P RDP    K E  FAELKQVCWLEVTGS +K++VPGK YK  F VSL PDAFGWDDCS
Subjt:  MPYDPHFRADVPVNV-NDNKFTIYPRALNITWGNDKRYWNLPRRDP----KKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS

Query:  VYIMAKIGKKGSFSFKKISLAGKP---TDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTD
        VYIMAKIGKKG F  KK++L   P   TD+    IP   D L ++V     P    +DDLNLYFGLYEVWTNRWKGGLRIH+A VE V   D
Subjt:  VYIMAKIGKKGSFSFKKISLAGKP---TDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTD

A0A6J1CNK5 protein PHLOEM PROTEIN 2-LIKE A9-like isoform X11.9e-4857.92Show/hide
Query:  YDPHFRADVPVNVND--NKFTIYPRALNITWGNDKRYWNLP-----RRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS
        + PH++ +    + D  NKF +YPR LNITWG D RYW LP     R D   E+  AELKQV WLEVTGST K+VV GKEYKVGF VSLRPDAFGW+   
Subjt:  YDPHFRADVPVNVND--NKFTIYPRALNITWGNDKRYWNLP-----RRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCS

Query:  VYIMAKIGKKGSFSFKKISLAGKPTDL-TKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFV
        VYIMAKIGK+G+ SFKK++  GK   +   F IP  +DKL I V   +   PS  DD  LYFG+YEVW+  WKGGL+IHHAFV
Subjt:  VYIMAKIGKKGSFSFKKISLAGKPTDL-TKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFV

A0A6J1GSJ8 protein PHLOEM PROTEIN 2-LIKE A9-like isoform X23.1e-4655.93Show/hide
Query:  DPHFRADVPVNVND--NKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAK
        +PH+RAD      D   K  IYPR LNITWGND RYW     D + E+ FAELKQV WLEVTGST ++V  GK +KV F V+LRP+AFGWD+ ++YIMAK
Subjt:  DPHFRADVPVNVND--NKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAK

Query:  IGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE
        IGKKG FSFKK++L  K  D  +F IP ++ K+ +             +D  LYFG+YEVW+NRWKGGLRIHHA VE
Subjt:  IGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE

A0A6J1K456 protein PHLOEM PROTEIN 2-LIKE A9-like1.2e-4758.43Show/hide
Query:  DPHFRADVPVNV---NDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMA
        +PH RA+   N+     NKF IYPR L+ITWGND RYW L   D + E+ FAELKQV WLEVTGST K +  G  +KV F V+LRP+AFGWD+C+VYIMA
Subjt:  DPHFRADVPVNV---NDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMA

Query:  KIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE
        KIGKKG +SFKK++L  K  +  +F IP+++  L IKV  PK       +DL LYFG+YEVW+NRWKGGLRI+HA VE
Subjt:  KIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVE

SwissProt top hitse value%identityAlignment
C0HJV2 Lectin1.5e-1039.64Show/hide
Query:  NVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEG----FAELKQVCWLEVTGSTEKEVV-PGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSF
        N   N F +Y R L ITW  DKRYW   R +P +E G     AEL  VCWL + G+ E  V+ PG  Y+  F V L   A GW    V +  K+   GS 
Subjt:  NVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEG----FAELKQVCWLEVTGSTEKEVV-PGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSF

Query:  SFKKISLAGKP
           +++L  KP
Subjt:  SFKKISLAGKP

Q9FJ80 F-box protein PP2-A146.2e-0436.51Show/hide
Query:  IYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSL
        I P+A+ IT  +D+RYW     D  +      L+Q+ WLE  G    E  PGK Y + F + L
Subjt:  IYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSL

Q9SA16 Protein PHLOEM PROTEIN 2-LIKE A92.2e-3343.41Show/hide
Query:  HFRADVPVNVNDNK--FTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIG
        H +AD  +  ++N+  +   P  LN  WG D RYW +P ++P+     AELK V WLEVTGS +K + PGK Y++GF +S +PDA GWD   V++ AKIG
Subjt:  HFRADVPVNVNDNK--FTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIG

Query:  KKGSFSFKKISLAGKPTDLTK-----FTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGV
        KKG   +K+I    +   + K       IP++ D L   + +P     + N D  L FGLYEVWT RWK GL IH AFV+ V
Subjt:  KKGSFSFKKISLAGKPTDLTK-----FTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGV

Arabidopsis top hitse value%identityAlignment
AT1G09155.1 phloem protein 2-B152.9e-0427.91Show/hide
Query:  FTIYPRALNITWGNDKRYWN-LPRRDPKKEEGFAELKQVCWLEVTGSTEKEVV-PGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIG
        + +  R L+ITW + + YW+  PR D +  EG  +L    WLE+ G  +   + P   Y    ++ +   A+G D        K+G
Subjt:  FTIYPRALNITWGNDKRYWN-LPRRDPKKEEGFAELKQVCWLEVTGSTEKEVV-PGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIG

AT1G10155.1 phloem protein 2-A102.5e-3246.63Show/hide
Query:  PRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSFKKISLAGKPTDLT
        P  LN  WG D RYW +P  D       AELK+V WLEVTGS +K + PGK Y++GF +S   DA GWD   V++ AKIGKKG   +K+I       D  
Subjt:  PRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSFKKISLAGKPTDLT

Query:  K-----FTIPND-DDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGV
        K       IP++ D +  I V     PK + N D  L FGLYEVWT +WK GL I+ AFVE V
Subjt:  K-----FTIPND-DDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGV

AT1G31200.1 phloem protein 2-A91.6e-3443.41Show/hide
Query:  HFRADVPVNVNDNK--FTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIG
        H +AD  +  ++N+  +   P  LN  WG D RYW +P ++P+     AELK V WLEVTGS +K + PGK Y++GF +S +PDA GWD   V++ AKIG
Subjt:  HFRADVPVNVNDNK--FTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIG

Query:  KKGSFSFKKISLAGKPTDLTK-----FTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGV
        KKG   +K+I    +   + K       IP++ D L   + +P     + N D  L FGLYEVWT RWK GL IH AFV+ V
Subjt:  KKGSFSFKKISLAGKPTDLTK-----FTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGV

AT2G02360.1 phloem protein 2-B102.9e-0430.86Show/hide
Query:  LNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVV-PGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKG
        L+I WG++ +YW        + E  A+L+ VCW E+ G T   V+ P   Y    V       +G+   +V I A +G  G
Subjt:  LNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVV-PGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKG

AT5G52120.1 phloem protein 2-A144.4e-0536.51Show/hide
Query:  IYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSL
        I P+A+ IT  +D+RYW     D  +      L+Q+ WLE  G    E  PGK Y + F + L
Subjt:  IYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATA
TTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAA
AAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTC
AAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAACCCAAACCGTC
TGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCG
ATAAAAGCACTCAATCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATA
TTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAA
AAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTC
AAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAACCCAAACCGTC
TGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCG
ATAAAAGCACTCAATCAAAGTAA
Protein sequenceShow/hide protein sequence
MPYDPHFRADVPVNVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSF
KKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQSK