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Clc01G09880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
Genome locationClcChr01:11648090..11649489
RNA-Seq ExpressionClc01G09880
SyntenyClc01G09880
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583795.1 Protein PHLOEM PROTEIN 2-LIKE A9, partial [Cucurbita argyrosperma subsp. sororia]9.7e-7676.5Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV +  SSPH+NGDPNA+EK++NQKT+I+PKGF ITWGND RYWRL   SR   KD+  AAELLQVSWLEVTC TDNVEVGKSYKVGFNLSMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV
        GC VYIMAKIGKAG FV+KKV LDTK    +  F+MP + LIITVKPPSSSPGDS LY GMYEVWSGRWKGGLKIHHAF+EK+
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV

XP_008459052.1 PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]3.2e-8782.7Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV  F SSPH NGDP A+EK KN+KTII+PKGF ITWGNDKRYWRL R SR+ K+ +  AAELLQVSWLEVTCWTDNVE+GKSYKVGFN+SMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        GC+VYIMAKIGKAGKFVYKK+ LD+K SDDQNKFNMPEDDLIITVKPPSSSPGD+RLY GMYEVWSG+WKGGLKIHHAF+EKVGN
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

XP_011660313.1 protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]3.3e-8480.54Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV  F SSPH NG+P A+EK KNQK II+PKGFTITWGNDKRYWR  R SR+ K+ +  AAELLQVSWLEVTCWTDNVE+GKSYKVGFN+SMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        GCEVYIMAKIGKAGKFVYKK+ LD K SD Q KFNMPED+LIITVKPPS+SPGD+RLY GMYEVWSG+WKGGLKIHHAF+EKVGN
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

XP_038895151.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]7.7e-8985.41Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV  F SSPH  GDP A+EKVKNQKTII+PKGFTITWGNDKRYWRL R S +RKK++   AELLQVSWLEVTCWTDNVEVGKSY+VGFNLSMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        GCEVYIMAKIGKAGKFV KKV LDTK SDDQNKFNMPEDDLIITVKPPSSSPGD+RLY GMYEVWSGRWKGGLKIHH F+EKVGN
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

XP_038896036.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]1.7e-8078.38Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV    SSPHSNGDP A+EK+KN++TII+P GFTITWGND RYWRL  P     K++  AAELLQVSWLEVTCWTDNVEVGKSY+VGFNLSMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        GCEVYIMAKIGKAGK+VYKKV LDT+CS  QNKFNMPE+DLIITV P  SSPGD RLY GMYEVWSGRWKGGLKIHHAF+EK+G+
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

TrEMBL top hitse value%identityAlignment
A0A0A0LYD1 Uncharacterized protein1.6e-8480.54Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV  F SSPH NG+P A+EK KNQK II+PKGFTITWGNDKRYWR  R SR+ K+ +  AAELLQVSWLEVTCWTDNVE+GKSYKVGFN+SMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        GCEVYIMAKIGKAGKFVYKK+ LD K SD Q KFNMPED+LIITVKPPS+SPGD+RLY GMYEVWSG+WKGGLKIHHAF+EKVGN
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

A0A1S3CAI0 protein PHLOEM PROTEIN 2-LIKE A9-like1.6e-8782.7Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV  F SSPH NGDP A+EK KN+KTII+PKGF ITWGNDKRYWRL R SR+ K+ +  AAELLQVSWLEVTCWTDNVE+GKSYKVGFN+SMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        GC+VYIMAKIGKAGKFVYKK+ LD+K SDDQNKFNMPEDDLIITVKPPSSSPGD+RLY GMYEVWSG+WKGGLKIHHAF+EKVGN
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

A0A5A7TIT6 Protein PHLOEM PROTEIN 2-LIKE A9-like1.6e-8782.7Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV  F SSPH NGDP A+EK KN+KTII+PKGF ITWGNDKRYWRL R SR+ K+ +  AAELLQVSWLEVTCWTDNVE+GKSYKVGFN+SMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        GC+VYIMAKIGKAGKFVYKK+ LD+K SDDQNKFNMPEDDLIITVKPPSSSPGD+RLY GMYEVWSG+WKGGLKIHHAF+EKVGN
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

A0A6J1CMQ3 protein PHLOEM PROTEIN 2-LIKE A9-like1.7e-7372.93Show/hide
Query:  FSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEV
        F S+PH NGDP A+EK+KNQKTII+P+G TITWGND RYWRL RP+R + KD+  AAELLQVSWLE+TC TDNVE GKSYKVGFN+SM   AFGWKGCEV
Subjt:  FSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEV

Query:  YIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN
        Y+MAKIGK+GKF+YKKVSL++K S D+ KF++ EDDL+I VK PSSSPGD RLY GMYEVWSG+WKGGL+IHHA ++K+ N
Subjt:  YIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN

A0A6J1EH83 protein PHLOEM PROTEIN 2-LIKE A96.2e-7676.5Show/hide
Query:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK
        MV +  SSPH+NGDPNA+EK++NQKT+I+PKGF ITWGND RYWRL   SR   KD+  AAELLQVSWLEVTC TDNVEVGKSYKVGFNLSMT  AFGWK
Subjt:  MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV
        GC VYIMAKIGKAG FV+KKV LDTK    +  F+MP + LIITVKPPSSSPGDS LY GMYEVWSGRWKGGLKIHHAF+EK+
Subjt:  GCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV

SwissProt top hitse value%identityAlignment
Q9SA16 Protein PHLOEM PROTEIN 2-LIKE A95.4e-2938.8Show/hide
Query:  SPHSNGDPNAMEKVKNQKT-IIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYI
        S H   D + ME+  N+K  I  P G    WG D RYW + +  R       + AEL  VSWLEVT   D +E GK+Y++GF +S    A GW    V++
Subjt:  SPHSNGDPNAMEKVKNQKT-IIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYI

Query:  MAKIGKAGKFVYKKVSLDTK----CSDDQNKFNMPE--DDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV
         AKIGK GK V+K++   ++            N+P+  D L   +  P++   D++L  G+YEVW+GRWK GL IH AF+++V
Subjt:  MAKIGKAGKFVYKKVSLDTK----CSDDQNKFNMPE--DDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV

Arabidopsis top hitse value%identityAlignment
AT1G10155.1 phloem protein 2-A103.9e-3037.16Show/hide
Query:  SPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYIM
        S H   + N  + +  +  +  P G    WG D RYW +  P+ DR       AEL +VSWLEVT   D +E GK+Y++GF +S T  A GW    V++ 
Subjt:  SPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYIM

Query:  AKIGKAGKFVYKKV-SLDT---KCSDDQNKFNMPEDD---LIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV
        AKIGK G+ ++K++ S++    K        N+P++      I V P  +   D++L  G+YEVW+G+WK GL I+ AF+E+V
Subjt:  AKIGKAGKFVYKKV-SLDT---KCSDDQNKFNMPEDD---LIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV

AT1G31200.1 phloem protein 2-A93.9e-3038.8Show/hide
Query:  SPHSNGDPNAMEKVKNQKT-IIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYI
        S H   D + ME+  N+K  I  P G    WG D RYW + +  R       + AEL  VSWLEVT   D +E GK+Y++GF +S    A GW    V++
Subjt:  SPHSNGDPNAMEKVKNQKT-IIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYI

Query:  MAKIGKAGKFVYKKVSLDTK----CSDDQNKFNMPE--DDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV
         AKIGK GK V+K++   ++            N+P+  D L   +  P++   D++L  G+YEVW+GRWK GL IH AF+++V
Subjt:  MAKIGKAGKFVYKKVSLDTK----CSDDQNKFNMPE--DDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTAGAATTTTCTCTTCATCACCTCACTCCAATGGAGATCCAAACGCTATGGAAAAGGTCAAGAACCAAAAGACAATAATACATCCCAAAGGCTTCACCATCACATG
GGGCAACGATAAACGCTATTGGCGCTTGTCTCGTCCATCTCGCGACAGGAAGAAGGACGCGATTGTGGCTGCAGAGTTGCTGCAAGTGTCATGGTTGGAGGTGACATGTT
GGACAGACAATGTAGAGGTCGGAAAAAGCTACAAAGTTGGTTTCAACTTATCCATGACTGTGGGGGCTTTTGGATGGAAAGGGTGTGAAGTTTACATAATGGCCAAGATC
GGGAAGGCTGGGAAATTCGTGTACAAAAAAGTGTCTCTCGATACAAAATGTTCCGATGATCAGAACAAGTTCAATATGCCTGAGGATGATCTCATTATCACAGTGAAACC
TCCGTCGAGCTCGCCGGGCGACAGCCGTCTCTACTTGGGAATGTATGAGGTTTGGAGCGGAAGATGGAAGGGAGGACTCAAGATCCACCATGCATTTATTGAGAAAGTCG
GGAACTAG
mRNA sequenceShow/hide mRNA sequence
ATCTCCTCCCACCATTTGTTTTTGAGAGATTGAGATCTATATACTTGTTCACTCTAGCGCAAGGATGGTTAGAATTTTCTCTTCATCACCTCACTCCAATGGAGATCCAA
ACGCTATGGAAAAGGTCAAGAACCAAAAGACAATAATACATCCCAAAGGCTTCACCATCACATGGGGCAACGATAAACGCTATTGGCGCTTGTCTCGTCCATCTCGCGAC
AGGAAGAAGGACGCGATTGTGGCTGCAGAGTTGCTGCAAGTGTCATGGTTGGAGGTGACATGTTGGACAGACAATGTAGAGGTCGGAAAAAGCTACAAAGTTGGTTTCAA
CTTATCCATGACTGTGGGGGCTTTTGGATGGAAAGGGTGTGAAGTTTACATAATGGCCAAGATCGGGAAGGCTGGGAAATTCGTGTACAAAAAAGTGTCTCTCGATACAA
AATGTTCCGATGATCAGAACAAGTTCAATATGCCTGAGGATGATCTCATTATCACAGTGAAACCTCCGTCGAGCTCGCCGGGCGACAGCCGTCTCTACTTGGGAATGTAT
GAGGTTTGGAGCGGAAGATGGAAGGGAGGACTCAAGATCCACCATGCATTTATTGAGAAAGTCGGGAACTAGATCGTGTTTTTATTCATGTTTTTTATAACATAATATTG
TAATTAAGGAATGGGGTTGAAACCGTAAGTTTGAGGAAAGTTATTAGTACTTCAATATATTGTTGATCATAATGGCAATGTTGTTTTTAGTCCATGTTAAGAGTACTTTG
AAATAGCCAAAATGATCTTTTTAATATAGAATATTAATAGTGGTCAAATT
Protein sequenceShow/hide protein sequence
MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYIMAKI
GKAGKFVYKKVSLDTKCSDDQNKFNMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN