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Clc01G09900 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09900
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
Genome locationClcChr01:11762390..11763776
RNA-Seq ExpressionClc01G09900
SyntenyClc01G09900
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459052.1 PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]7.3e-9287.5Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH NGDPKAIEK KN+KTIIYP GFNITWGND RYWRLPRQSRNLKESSAAAELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        C+VYIMAKIGKAGKFVYKK+CLD++ S DQNKFNMPEDDLIITV PP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVEKVGN
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

XP_011660313.1 protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]2.2e-8884.78Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH NG+PKAIEK KNQK IIYP GF ITWGND RYWR PRQSRNLKESSAAAELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCSD-QNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        CEVYIMAKIGKAGKFVYKK+CLD + SD Q KFNMPED+LIITV PP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVEKVGN
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCSD-QNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

XP_022955086.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita moschata]6.4e-8077.9Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH  GD KAIEKIKN+KTIIYP G +ITWG D+RYWRLP Q RN+K+ SAAAELLQVSW EVTCSTDNV+ GKSYRVGFN+SM  AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV
        C+VYIMAKIGKAG+FVYKK+ L+ +CS  NKF+MPE+ LIITV PPPSS GD+ LYFGMYEVWSGRWKGGLKIHHAFVE++
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV

XP_038895151.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]1.0e-8585.95Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRN-LKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWK
        MV F YSSPH  GDPKAIEK+KNQKTIIYP GF ITWGND RYWRLPRQS N  KESS  AELLQVSW EVTC TDNV+VGKSYRVGFNLSMT AAFGWK
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRN-LKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWK

Query:  GCEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        GCEVYIMAKIGKAGKFV KKV LDT+ S DQNKFNMPEDDLIITV PP SSPGD RLYFGMYEVWSGRWKGGLKIHH FVEKVGN
Subjt:  GCEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

XP_038896036.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]2.5e-9289.07Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV FSYSSPHSNGDPKAIEKIKN++TIIYPNGF ITWGNDNRYWRLP QS N KESSAAAELLQVSW EVTC TDNV+VGKSYRVGFNLSMT AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        CEVYIMAKIGKAGK+VYKKV LDT+CS QNKFNMPE+DLIITVNP PSSPGD+RLYFGMYEVWSGRWKGGLKIHHAFVEK+G+
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

TrEMBL top hitse value%identityAlignment
A0A0A0LYD1 Uncharacterized protein1.1e-8884.78Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH NG+PKAIEK KNQK IIYP GF ITWGND RYWR PRQSRNLKESSAAAELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCSD-QNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        CEVYIMAKIGKAGKFVYKK+CLD + SD Q KFNMPED+LIITV PP +SPGDNRLYFGMYEVWSG+WKGGLKIHHAFVEKVGN
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCSD-QNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

A0A1S3CAI0 protein PHLOEM PROTEIN 2-LIKE A9-like3.6e-9287.5Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH NGDPKAIEK KN+KTIIYP GFNITWGND RYWRLPRQSRNLKESSAAAELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        C+VYIMAKIGKAGKFVYKK+CLD++ S DQNKFNMPEDDLIITV PP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVEKVGN
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

A0A5A7TIT6 Protein PHLOEM PROTEIN 2-LIKE A9-like3.6e-9287.5Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH NGDPKAIEK KN+KTIIYP GFNITWGND RYWRLPRQSRNLKESSAAAELLQVSW EVTC TDNV++GKSY+VGFN+SMT AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        C+VYIMAKIGKAGKFVYKK+CLD++ S DQNKFNMPEDDLIITV PP SSPGDNRLYFGMYEVWSG+WKGGLKIHHAFVEKVGN
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCS-DQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

A0A6J1GSR3 protein PHLOEM PROTEIN 2-LIKE A9-like3.1e-8077.9Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH  GD KAIEKIKN+KTIIYP G +ITWG D+RYWRLP Q RN+K+ SAAAELLQVSW EVTCSTDNV+ GKSYRVGFN+SM  AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV
        C+VYIMAKIGKAG+FVYKK+ L+ +CS  NKF+MPE+ LIITV PPPSS GD+ LYFGMYEVWSGRWKGGLKIHHAFVE++
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV

A0A6J1K461 protein PHLOEM PROTEIN 2-LIKE A9-like1.5e-7977.05Show/hide
Query:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG
        MV F YSSPH  GD KAIEKIKN+KTIIYP G +ITWG D+RYWRLP + RN K+ SAAAELLQVSW EVTCST+N++ GKSYRVGFN+SM  AAFGWKG
Subjt:  MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKG

Query:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN
        C VYIMAKIGKAGKFVYKK+ L+ +CS  NKF+MPE+DLIITV PPPSS GD  LYFGMYEVW+GRWKGGL IHHAFVEKV N
Subjt:  CEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN

SwissProt top hitse value%identityAlignment
Q9SA16 Protein PHLOEM PROTEIN 2-LIKE A92.0e-3140.43Show/hide
Query:  SYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVY
        S  S H   D K  +    +  I  P+G N  WG D+RYW +P      KE    AEL  VSW EVT S D ++ GK+YR+GF +S    A GW    V+
Subjt:  SYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVY

Query:  IMAKIGKAGKFVYKKVCLDTRCSDQN---------KFNMPE--DDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV
        + AKIGK GK V+K++    +   QN           N+P+  D L   +  P +   D +L FG+YEVW+GRWK GL IH AFV++V
Subjt:  IMAKIGKAGKFVYKKVCLDTRCSDQN---------KFNMPE--DDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV

Arabidopsis top hitse value%identityAlignment
AT1G10155.1 phloem protein 2-A104.1e-3238.46Show/hide
Query:  SPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMA
        S H   +    + I  +  +  P+G N  WG D+RYW +P + R        AEL +VSW EVT S D ++ GK+YR+GF +S T  A GW    V++ A
Subjt:  SPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMA

Query:  KIGKAGKFVYKKVCLDTRCSDQNK-----FNMPEDD---LIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV
        KIGK G+ ++K++       D+ K      N+P++      I V+P  +   D +L FG+YEVW+G+WK GL I+ AFVE+V
Subjt:  KIGKAGKFVYKKVCLDTRCSDQNK-----FNMPEDD---LIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV

AT1G31200.1 phloem protein 2-A91.4e-3240.43Show/hide
Query:  SYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVY
        S  S H   D K  +    +  I  P+G N  WG D+RYW +P      KE    AEL  VSW EVT S D ++ GK+YR+GF +S    A GW    V+
Subjt:  SYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVY

Query:  IMAKIGKAGKFVYKKVCLDTRCSDQN---------KFNMPE--DDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV
        + AKIGK GK V+K++    +   QN           N+P+  D L   +  P +   D +L FG+YEVW+GRWK GL IH AFV++V
Subjt:  IMAKIGKAGKFVYKKVCLDTRCSDQN---------KFNMPE--DDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKV

AT2G26820.1 phloem protein 2-A33.6e-0428.57Show/hide
Query:  IEKIKNQKTIIYPN------GFNITWGNDNRYWRLPRQSRNLKESS--AAAELLQVSWFEVTCSTDNVDVG--KSYRVGFNLSMTVAAFGW
        +E+ KN++ I   N        NI W +   +W+      N+  ++    AELL V WF+V+ S D  ++     Y V F +++  +AF W
Subjt:  IEKIKNQKTIIYPN------GFNITWGNDNRYWRLPRQSRNLKESS--AAAELLQVSWFEVTCSTDNVDVG--KSYRVGFNLSMTVAAFGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGCTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATG
GGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCAA
CAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGG
AAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAGATGATCTAATTATCACCGTGAACCCTCCGCC
GAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGATGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACT
AG
mRNA sequenceShow/hide mRNA sequence
GAGAGCTATACTTGTTCACTCTAGCACCAAGATGGTTGCTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAA
TAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTA
CAAGTGTCATGGTTCGAGGTGACATGTTCAACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGG
ATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAG
ATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGATGGAAGGGAGGACTCAAAATC
CACCATGCATTTGTCGAGAAGGTTGGAAACTAGAGCTTGACCAATCAATAAAAAAGAACATTATTCAAAATAACTGTCACCCTATCAAAGAGAGAAAAATGGAATGTTTG
AAATATTATGAAATAAAATATTGAATTTTGACTATGAAA
Protein sequenceShow/hide protein sequence
MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIG
KAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN