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Clc01G09910 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G09910
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein PHLOEM PROTEIN 2-LIKE A9-like
Genome locationClcChr01:11809841..11811557
RNA-Seq ExpressionClc01G09910
SyntenyClc01G09910
Gene Ontology termsNA
InterPro domainsIPR025886 - Phloem protein 2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459052.1 PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like [Cucumis melo]1.5e-6060.45Show/hide
Query:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI
        ++ PH++ DP+A+E  K  +T+ YP+ FNITWGND R+WR PRQS NLK+  +A +LLQVSWLEVTC TDNVE GK+YKVGFN+S+   AFGW   +V+I
Subjt:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI

Query:  MAKVGKKGNYIFKKTNLGNKPT-NSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        MAK+GK G +++KK  L +K + +  KF++PE+ L + V  P SSPGD RLYFG+YEVWSGKWKGGL+IH+AFVEKV
Subjt:  MAKVGKKGNYIFKKTNLGNKPT-NSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

XP_011660312.1 protein PHLOEM PROTEIN 2-LIKE A9 [Cucumis sativus]7.2e-7676.67Show/hide
Query:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE
        MA  +KPH DADPRA+E  KG + +FYPRA  ITWGNDNR+WRF   S NLKDPKSAVQLLQVSWLEVTCSTD VEAG+TYKVGFN+SLQPDAFGW+++E
Subjt:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE

Query:  VFIMAKVGKKGNYIFKKTNLGNK-PTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        VFIMAKVGKKG Y FKKT+ G +  T+S KFSVP+EGLE+++VAP SSPGD  LYFGLYEVWSGKWKGGLQIH+AFVEKV
Subjt:  VFIMAKVGKKGNYIFKKTNLGNK-PTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

XP_022142616.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Momordica charantia]4.1e-6360.67Show/hide
Query:  ANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEV
        A ++ PHY+ DP+A+E IK  +T+ YPR   ITWGNDNR+WR PR +   KD  SA +LLQVSWLE+TCSTDNVEAGK+YKVGFN+S+ PDAFGW   EV
Subjt:  ANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEV

Query:  FIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        ++MAK+GK G +++KK +L +K  +  KF + E+ L ++V AP SSPGD RLYFG+YEVWSGKWKGGL+IH+A V+K+
Subjt:  FIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

XP_022955086.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Cucurbita moschata]6.6e-6159.66Show/hide
Query:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI
        ++ PH+  D +A+E IK  +T+ YP+  +ITWG D+R+WR P Q  N+KDP +A +LLQVSWLEVTCSTDNVEAGK+Y+VGFN+S+ P AFGW   +V+I
Subjt:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI

Query:  MAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        MAK+GK G +++KK +L NK +   KFS+PEEGL + V  PPSS GD  LYFG+YEVWSG+WKGGL+IH+AFVE++
Subjt:  MAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

XP_038895144.1 protein PHLOEM PROTEIN 2-LIKE A9-like [Benincasa hispida]7.9e-9188.27Show/hide
Query:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE
        MA F+ PHYDADP+A+ETIKG RTVFYPRAFNITWGNDNR+WRFP Q+INLKDPKS VQLLQVSWLEVTCSTDNVE GKTYKVGFNLSLQPDAFGWNE+E
Subjt:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE

Query:  VFIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        VFIMAKVGKKGNYIFKKT LGNKPTN+TKF  PEEGLE++VVAPPSSPGD RLYFGLYEVWSGKWKGGLQIHNAFV K+
Subjt:  VFIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

TrEMBL top hitse value%identityAlignment
A0A0A0M0V4 Uncharacterized protein3.5e-7676.67Show/hide
Query:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE
        MA  +KPH DADPRA+E  KG + +FYPRA  ITWGNDNR+WRF   S NLKDPKSAVQLLQVSWLEVTCSTD VEAG+TYKVGFN+SLQPDAFGW+++E
Subjt:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE

Query:  VFIMAKVGKKGNYIFKKTNLGNK-PTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        VFIMAKVGKKG Y FKKT+ G +  T+S KFSVP+EGLE+++VAP SSPGD  LYFGLYEVWSGKWKGGLQIH+AFVEKV
Subjt:  VFIMAKVGKKGNYIFKKTNLGNK-PTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

A0A1S3CAI0 protein PHLOEM PROTEIN 2-LIKE A9-like7.1e-6160.45Show/hide
Query:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI
        ++ PH++ DP+A+E  K  +T+ YP+ FNITWGND R+WR PRQS NLK+  +A +LLQVSWLEVTC TDNVE GK+YKVGFN+S+   AFGW   +V+I
Subjt:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI

Query:  MAKVGKKGNYIFKKTNLGNKPT-NSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        MAK+GK G +++KK  L +K + +  KF++PE+ L + V  P SSPGD RLYFG+YEVWSGKWKGGL+IH+AFVEKV
Subjt:  MAKVGKKGNYIFKKTNLGNKPT-NSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

A0A5A7TIT6 Protein PHLOEM PROTEIN 2-LIKE A9-like7.1e-6160.45Show/hide
Query:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI
        ++ PH++ DP+A+E  K  +T+ YP+ FNITWGND R+WR PRQS NLK+  +A +LLQVSWLEVTC TDNVE GK+YKVGFN+S+   AFGW   +V+I
Subjt:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI

Query:  MAKVGKKGNYIFKKTNLGNKPT-NSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        MAK+GK G +++KK  L +K + +  KF++PE+ L + V  P SSPGD RLYFG+YEVWSGKWKGGL+IH+AFVEKV
Subjt:  MAKVGKKGNYIFKKTNLGNKPT-NSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

A0A6J1CMQ3 protein PHLOEM PROTEIN 2-LIKE A9-like2.0e-6360.67Show/hide
Query:  ANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEV
        A ++ PHY+ DP+A+E IK  +T+ YPR   ITWGNDNR+WR PR +   KD  SA +LLQVSWLE+TCSTDNVEAGK+YKVGFN+S+ PDAFGW   EV
Subjt:  ANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEV

Query:  FIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        ++MAK+GK G +++KK +L +K  +  KF + E+ L ++V AP SSPGD RLYFG+YEVWSGKWKGGL+IH+A V+K+
Subjt:  FIMAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

A0A6J1GSR3 protein PHLOEM PROTEIN 2-LIKE A9-like3.2e-6159.66Show/hide
Query:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI
        ++ PH+  D +A+E IK  +T+ YP+  +ITWG D+R+WR P Q  N+KDP +A +LLQVSWLEVTCSTDNVEAGK+Y+VGFN+S+ P AFGW   +V+I
Subjt:  FAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFI

Query:  MAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        MAK+GK G +++KK +L NK +   KFS+PEEGL + V  PPSS GD  LYFG+YEVWSG+WKGGL+IH+AFVE++
Subjt:  MAKVGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

SwissProt top hitse value%identityAlignment
Q9SA16 Protein PHLOEM PROTEIN 2-LIKE A99.9e-3640.32Show/hide
Query:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE
        M++    H+ AD +  +       +  P   N  WG D+R+W  P      K+P+   +L  VSWLEVT S D +E GKTY++GF +S +PDA GW++  
Subjt:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE

Query:  VFIMAKVGKKGNYIFKK-----TNLGNKPTNSTKFSVPEE--GLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        VF+ AK+GKKG  ++K+      N G     S   ++P+E  GL   +V+P +   D +L FGLYEVW+G+WK GL IH AFV++V
Subjt:  VFIMAKVGKKGNYIFKK-----TNLGNKPTNSTKFSVPEE--GLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

Arabidopsis top hitse value%identityAlignment
AT1G10155.1 phloem protein 2-A107.3e-3440.56Show/hide
Query:  HYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFIMAKV
        HY+A+    + I     VF P   N  WG D+R+W  P +       ++  +L +VSWLEVT S D +E GKTY++GF +S   DA GW++  VF+ AK+
Subjt:  HYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFIMAKV

Query:  GKKGNYIFKKTNLGNKPTNSTK-----FSVPEE---GLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        GKKG  I+K+    N   +  K      ++P+E     E+ V    +   D +L FGLYEVW+GKWK GL I+ AFVE+V
Subjt:  GKKGNYIFKKTNLGNKPTNSTK-----FSVPEE---GLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV

AT1G31200.1 phloem protein 2-A97.0e-3740.32Show/hide
Query:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE
        M++    H+ AD +  +       +  P   N  WG D+R+W  P      K+P+   +L  VSWLEVT S D +E GKTY++GF +S +PDA GW++  
Subjt:  MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELE

Query:  VFIMAKVGKKGNYIFKK-----TNLGNKPTNSTKFSVPEE--GLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV
        VF+ AK+GKKG  ++K+      N G     S   ++P+E  GL   +V+P +   D +L FGLYEVW+G+WK GL IH AFV++V
Subjt:  VFIMAKVGKKGNYIFKK-----TNLGNKPTNSTKFSVPEE--GLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAACTTTGCAAAACCCCATTATGATGCTGATCCAAGGGCCGTAGAAACTATCAAGGGCTGCAGAACTGTATTTTATCCGAGAGCATTCAACATCACATGGGGCAA
TGACAATCGCCATTGGCGTTTTCCTCGTCAAAGCATTAATTTGAAGGATCCAAAATCAGCTGTGCAACTATTGCAAGTGAGTTGGCTAGAAGTGACTTGTTCAACAGACA
ATGTGGAGGCTGGCAAGACCTATAAAGTGGGCTTCAATTTATCACTTCAACCAGATGCATTTGGGTGGAATGAGCTTGAAGTTTTCATAATGGCCAAGGTTGGAAAAAAG
GGAAACTACATTTTCAAGAAGACTAATCTTGGGAACAAACCTACAAACTCTACAAAGTTTAGTGTTCCCGAGGAGGGTTTGGAAATGGAAGTTGTTGCACCACCAAGCTC
CCCAGGAGATTGGAGGCTCTATTTTGGACTTTATGAAGTTTGGAGTGGCAAATGGAAGGGAGGCCTGCAGATTCATAATGCTTTTGTTGAGAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
CTAAAACTACCTACCTAGCTATATATCATCCCTAGACATAGAGAGAGAAAGAGTTAATTAGTTTGAGCATACTAATTTTTCTTCTTAATTAGTTGAGAATGGCTAACTTT
GCAAAACCCCATTATGATGCTGATCCAAGGGCCGTAGAAACTATCAAGGGCTGCAGAACTGTATTTTATCCGAGAGCATTCAACATCACATGGGGCAATGACAATCGCCA
TTGGCGTTTTCCTCGTCAAAGCATTAATTTGAAGGATCCAAAATCAGCTGTGCAACTATTGCAAGTGAGTTGGCTAGAAGTGACTTGTTCAACAGACAATGTGGAGGCTG
GCAAGACCTATAAAGTGGGCTTCAATTTATCACTTCAACCAGATGCATTTGGGTGGAATGAGCTTGAAGTTTTCATAATGGCCAAGGTTGGAAAAAAGGGAAACTACATT
TTCAAGAAGACTAATCTTGGGAACAAACCTACAAACTCTACAAAGTTTAGTGTTCCCGAGGAGGGTTTGGAAATGGAAGTTGTTGCACCACCAAGCTCCCCAGGAGATTG
GAGGCTCTATTTTGGACTTTATGAAGTTTGGAGTGGCAAATGGAAGGGAGGCCTGCAGATTCATAATGCTTTTGTTGAGAAAGTTTGAAGTTGAATTTGGCTTTTGTTAG
AGTTATTATTAAAAATGAAAAAAATTTAATTACTTTTAGTCTTCAAATTACTTTTTAAATAGGCGCGTTTCGTTTTAGTTTTCAATTTTTGTCCATTTAATCTCTCAGTT
TTTAATTTTTGCCAATTTAATCTCTCAATTTTCAAAAATCATTTAAAC
Protein sequenceShow/hide protein sequence
MANFAKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRHWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNLSLQPDAFGWNELEVFIMAKVGKK
GNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDWRLYFGLYEVWSGKWKGGLQIHNAFVEKV