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Clc01G10650 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G10650
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionMitochondrial import inner membrane translocase subunit tim16
Genome locationClcChr01:14889790..14895674
RNA-Seq ExpressionClc01G10650
SyntenyClc01G10650
Gene Ontology termsGO:0030150 - protein import into mitochondrial matrix (biological process)
GO:0005744 - TIM23 mitochondrial import inner membrane translocase complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR005341 - Mitochondrial import inner membrane translocase subunit Tim16
IPR036869 - Chaperone J-domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035623.1 mitochondrial import inner membrane translocase subunit tim16 [Cucumis melo var. makuwa]8.5e-5590.3Show/hide
Query:  LTSSSRFNDSRPVIKASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTL
        + SSS FNDS  V++AS LIMAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVTEE PWEEVVKKYD L
Subjt:  LTSSSRFNDSRPVIKASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTL

Query:  FERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA
        FERNAQTGSFYLQSKVHRAKERLETLYQ+KGQDA
Subjt:  FERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA

KAG6592401.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. sororia]2.5e-5488.32Show/hide
Query:  LTSSSRFNDSRPVIKASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTL
        +TSSS  ND  PVI+ASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVT E PWEE+VKKYD L
Subjt:  LTSSSRFNDSRPVIKASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTL

Query:  FERNAQTGSFYLQSKVHRAKERLETLYQSKGQDASRA
        FE+NAQTGSFYLQSKVHRAKERLETLYQSKG     A
Subjt:  FERNAQTGSFYLQSKVHRAKERLETLYQSKGQDASRA

KAG7011201.1 Mitochondrial import inner membrane translocase subunit PAM16 like 2, partial [Cucurbita argyrosperma subsp. argyrosperma]4.1e-4996.49Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVT E PWEE+VKKYD LFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDA
        ERLETLYQSKGQDA
Subjt:  ERLETLYQSKGQDA

XP_022925423.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like [Cucurbita moschata]9.1e-4995.61Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVT E PWEE+VKKYD LFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDA
        ERLETLYQSKGQDA
Subjt:  ERLETLYQSKGQDA

XP_022967548.1 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X3 [Cucurbita maxima]1.2e-4895.61Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILGVT E PWEE+VKKYD LFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDA
        ERLETLYQSKGQDA
Subjt:  ERLETLYQSKGQDA

TrEMBL top hitse value%identityAlignment
A0A5D3E4Y7 Mitochondrial import inner membrane translocase subunit tim164.1e-5590.3Show/hide
Query:  LTSSSRFNDSRPVIKASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTL
        + SSS FNDS  V++AS LIMAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQET+QNTVRRASKVMTEQEARQILGVTEE PWEEVVKKYD L
Subjt:  LTSSSRFNDSRPVIKASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTL

Query:  FERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA
        FERNAQTGSFYLQSKVHRAKERLETLYQ+KGQDA
Subjt:  FERNAQTGSFYLQSKVHRAKERLETLYQSKGQDA

A0A6J1DR54 mitochondrial import inner membrane translocase subunit PAM16 like 2-like9.8e-4995.61Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQAL NASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEE PWEE+VKKYDTLFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDA
        ERLETLYQSK QDA
Subjt:  ERLETLYQSKGQDA

A0A6J1EF52 mitochondrial import inner membrane translocase subunit PAM16 like 2-like4.4e-4995.61Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVT E PWEE+VKKYD LFE+NAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDA
        ERLETLYQSKGQDA
Subjt:  ERLETLYQSKGQDA

A0A6J1HHA5 mitochondrial import inner membrane translocase subunit PAM16 like 2-like7.5e-4994.74Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILG+T E PWEE+VKKYD LFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDA
        ERLETLYQSKGQDA
Subjt:  ERLETLYQSKGQDA

A0A6J1HVD2 mitochondrial import inner membrane translocase subunit PAM16 like 2-like isoform X35.8e-4995.61Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQN+VRRASKVMTEQEARQILGVT E PWEE+VKKYD LFERNAQTGSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKGQDA
        ERLETLYQSKGQDA
Subjt:  ERLETLYQSKGQDA

SwissProt top hitse value%identityAlignment
Q6PBL0 Mitochondrial import inner membrane translocase subunit tim162.3e-1046.23Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERN--AQTGSFYLQSKVHR
        AK LA +IVMG+ ++ RAF +A RQ  A + A+     Q   Q+    +   MT QEA+QIL ++   P EE+ K Y+ LF+ N  A  GSFY+QSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQ--ALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERN--AQTGSFYLQSKVHR

Query:  AKERLE
        AKERL+
Subjt:  AKERLE

Q93VV9 Mitochondrial import inner membrane translocase subunit PAM16 like 26.4e-3772.97Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILGVTE+  WEE+++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKG
        E LE +Y+S+G
Subjt:  ERLETLYQSKG

Q93W66 Mitochondrial import inner membrane translocase subunit PAM16 like 14.7e-3271.3Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVTE+  W+E++KKYDTLFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

Q9CQV1 Mitochondrial import inner membrane translocase subunit TIM161.1e-0942.61Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQT--GSFYLQSKVHR
        AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+QIL V++  P EEV K Y+ LF+ N ++  GSFYLQSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQT--GSFYLQSKVHR

Query:  AKERLETLYQSKGQD
        AKERL+   + + Q+
Subjt:  AKERLETLYQSKGQD

Q9Y3D7 Mitochondrial import inner membrane translocase subunit TIM161.5e-0942.61Show/hide
Query:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQT--GSFYLQSKVHR
        AK LA +IVMG  ++ RAF +A RQ    +  +  A+    +    AS +  ++ QEA+QIL V++  P EEV K Y+ LF+ N ++  GSFYLQSKV R
Subjt:  AKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKV--MTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQT--GSFYLQSKVHR

Query:  AKERLETLYQSKGQD
        AKERL+   + + Q+
Subjt:  AKERLETLYQSKGQD

Arabidopsis top hitse value%identityAlignment
AT3G59280.1 Protein Transporter, Pam164.5e-3872.97Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MA ++LANLIVMGSGI+ RA  QAYRQAL NASKSGVAQE +QN VR+A K +TEQEARQILGVTE+  WEE+++KYD LFE NA+ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQSKG
        E LE +Y+S+G
Subjt:  ERLETLYQSKG

AT5G61880.1 Protein Transporter, Pam163.4e-3371.3Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVTE+  W+E++KKYDTLFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ

AT5G61880.2 Protein Transporter, Pam163.4e-3371.3Show/hide
Query:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK
        MAA++LA++IVMGSGI+ARA  QAYRQAL NASK+GVA E  Q T++R   +  E EARQILGVTE+  W+E++KKYDTLFERNAQ GSFYLQSKVHRAK
Subjt:  MAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQETIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAK

Query:  ERLETLYQ
        E LET YQ
Subjt:  ERLETLYQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCAACAATTTCGGTCAATTTTATTTTGAAATGTTGCCAAATTCGACCTATTTTTATACAATCAAGCCTGGTAATGTCCTCCAACATTGGGCAATTGTTAAGTAT
CCACAATTGTTGGCTTAATTTAAAGATTGGACTTCCAATCCTGACAAGCTCTAGCCGCTTTAACGATTCCAGACCTGTTATCAAGGCCAGCCAGTTAATCATGGCTGCAA
AAATTCTTGCCAATTTAATTGTTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACAAATGCTTCAAAGTCGGGTGTTGCCCAAGAA
ACAATACAAAACACTGTTCGTAGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTCGGCGTTACCGAGGAAATGCCTTGGGAAGAAGTTGTGAAGAAATA
TGACACTTTGTTTGAAAGGAATGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAAGGTCAAGATG
CCTCTAGAGCCTGTCGAAGTCGAACCTTGCCGTCTAGCTTAGCAACGATGCTGTGGTCACCAACCTTCAGAGTTACTGCCACGAATCCAATTAACTTTGAGTAA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTCTTCTTCTTCAAACCCTAGGCCCAAGATTTTGGCTCTTTCCCACCATTGTTATTTTTCTCTGTTTCTCTGTATCATCTATACCAGAGCTGCTCGACAAGTAT
TGGTTCTTCTCACCGGCTCCTGGCGGCAGACATAGCCAAGCTCCGTCACCAACCCCACAACCATATTTCATTTCTTTCTCTCCATCTCCATCGCTGCAAACCTCCATCTC
AAGGTCTGTCCATGTTTTCTTTTCCCTTTTTTCTCTTCACTTTCTTACAGTTTTTATACAATTTATTAATCTTTTACTCTTCACAATCCTGTTTCCCCATCTCTTCTCTA
TCACCCATCTTTCTTCCTTACTTCCCACACATTAATCCTACCACTTTCCCTCTTCGCTATGTTCTTTCTCTTTTCTCTGTTTTCCCTGTATGATTTCAACAATTTCGGTC
AATTTTATTTTGAAATGTTGCCAAATTCGACCTATTTTTATACAATCAAGCCTGGTAATGTCCTCCAACATTGGGCAATTGTTAAGTATCCACAATTGTTGGCTTAATTT
AAAGATTGGACTTCCAATCCTGACAAGCTCTAGCCGCTTTAACGATTCCAGACCTGTTATCAAGGCCAGCCAGTTAATCATGGCTGCAAAAATTCTTGCCAATTTAATTG
TTATGGGCTCTGGGATACTTGCGAGGGCCTTTGTTCAAGCCTATCGTCAAGCCCTTACAAATGCTTCAAAGTCGGGTGTTGCCCAAGAAACAATACAAAACACTGTTCGT
AGAGCAAGCAAAGTGATGACAGAGCAAGAAGCGAGGCAGATTCTCGGCGTTACCGAGGAAATGCCTTGGGAAGAAGTTGTGAAGAAATATGACACTTTGTTTGAAAGGAA
TGCTCAAACTGGAAGCTTTTATCTTCAGTCAAAAGTTCACAGAGCCAAGGAACGATTAGAAACTCTCTATCAGAGCAAAGGTCAAGATGCCTCTAGAGCCTGTCGAAGTC
GAACCTTGCCGTCTAGCTTAGCAACGATGCTGTGGTCACCAACCTTCAGAGTTACTGCCACGAATCCAATTAACTTTGAGTAA
Protein sequenceShow/hide protein sequence
MISTISVNFILKCCQIRPIFIQSSLVMSSNIGQLLSIHNCWLNLKIGLPILTSSSRFNDSRPVIKASQLIMAAKILANLIVMGSGILARAFVQAYRQALTNASKSGVAQE
TIQNTVRRASKVMTEQEARQILGVTEEMPWEEVVKKYDTLFERNAQTGSFYLQSKVHRAKERLETLYQSKGQDASRACRSRTLPSSLATMLWSPTFRVTATNPINFE