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Clc01G10880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G10880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNADH-u_ox-rdase domain-containing protein
Genome locationClcChr01:15759299..15762643
RNA-Seq ExpressionClc01G10880
SyntenyClc01G10880
Gene Ontology termsGO:0005747 - mitochondrial respiratory chain complex I (cellular component)
InterPro domainsIPR019721 - NADH-ubiquinone oxidoreductase, 21kDa subunit, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583741.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]1.5e-4275.81Show/hide
Query:  RAHERNARSSVSSATTNTRIVLATATTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQN
        R  +R    +  S +T   ++    T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQN
Subjt:  RAHERNARSSVSSATTNTRIVLATATTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQN

Query:  SAGRLMGFFPNEGEDLYSLPLHYA
        SAGR+MGFFPNEGE L    L +A
Subjt:  SAGRLMGFFPNEGEDLYSLPLHYA
XP_008463609.1 PREDICTED: NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis melo]1.6e-4197.75Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
XP_011654950.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Cucumis sativus]2.2e-4196.63Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPV+DRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
XP_022142552.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit [Momordica charantia]7.4e-4298.88Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
XP_022927362.1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like [Cucurbita moschata]1.3e-4197.75Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNEGE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
TrEMBL top hitse value%identityAlignment
A0A1S3CJL9 NADH-ubiquinone oxidoreductase 20.9 kDa subunit8.0e-4297.75Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
A0A6J1CN33 NADH-ubiquinone oxidoreductase 20.9 kDa subunit3.6e-4298.88Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
A0A6J1EGY7 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like6.1e-4297.75Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGR+MGFFPNEGE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
A0A6J1EHK1 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like3.6e-4298.88Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
A0A6J1HSH8 NADH-ubiquinone oxidoreductase 20.9 kDa subunit-like3.6e-4298.88Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T STKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G16450.1 unknown protein5.7e-4086.52Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T   K +YPV+DRNP FTKVVGNF TLDYLRF TITG+SVTVGYLSGIKPGI+GPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
AT4G16450.2 unknown protein5.7e-4086.52Show/hide
Query:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE
        T   K +YPV+DRNP FTKVVGNF TLDYLRF TITG+SVTVGYLSGIKPGI+GPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPN+GE
Subjt:  TTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAYQNSAGRLMGFFPNEGE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCCGTGCCGAGGCTGATCCAATTGCTTTGGGCCGGGCTCATGAAAGAAATGCCCGTTCATCAGTCAGCTCAGCAACCACTAACACTCGTATCGTCTTAGCAACCGC
AACGACGTCGACCAAGCCAGAGTACCCAGTAATAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCG
GCGTTTCCGTCACCGTCGGTTATCTTTCCGGGATTAAGCCCGGGATTAGGGGCCCGTCAATGGTCACCGGTGGTCTAATTGGTCTGATGGGAGGCTTCATGTACGCTTAT
CAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGATCTATATTCGCTTCCCTTACATTATGCCATTAGGCATCGGAATCCTAAGAAAAGTGCCAT
GACCATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGCCGTGCCGAGGCTGATCCAATTGCTTTGGGCCGGGCTCATGAAAGAAATGCCCGTTCATCAGTCAGCTCAGCAACCACTAACACTCGTATCGTCTTAGCAACCGC
AACGACGTCGACCAAGCCAGAGTACCCAGTAATAGATCGGAACCCTCCATTCACTAAAGTCGTCGGCAATTTCGACACTCTCGATTACCTCCGTTTCGTCACCATCACCG
GCGTTTCCGTCACCGTCGGTTATCTTTCCGGGATTAAGCCCGGGATTAGGGGCCCGTCAATGGTCACCGGTGGTCTAATTGGTCTGATGGGAGGCTTCATGTACGCTTAT
CAGAACTCGGCGGGTCGGCTTATGGGATTCTTCCCCAATGAAGGCGAGGATCTATATTCGCTTCCCTTACATTATGCCATTAGGCATCGGAATCCTAAGAAAAGTGCCAT
GACCATTTAGGGGGCGTTTGGCGCACACGTTCGGAATCAAAAGCCTGGGAATATAATGTCAGAGGTTTATTTTAGAGTATTTTGAAGCCTGTGAATCACAAATGTCTGTG
TTTGGTGTGTAGTGTTTGAAAGCTTGGTTTTTTAAGCGTGTGGTTGGGGCACAGTTTATATATGCTTGGGTTTGGATAATTTGTATTTTTTTCTTGTGAAATGTATATCA
CCTGGTGTACCATGGATCAATCTTTAAGATAATCTTAAATATAACATTTAAT
Protein sequenceShow/hide protein sequence
MGRAEADPIALGRAHERNARSSVSSATTNTRIVLATATTSTKPEYPVIDRNPPFTKVVGNFDTLDYLRFVTITGVSVTVGYLSGIKPGIRGPSMVTGGLIGLMGGFMYAY
QNSAGRLMGFFPNEGEDLYSLPLHYAIRHRNPKKSAMTI