CuGenDBv2

Gene ID	Clc01G10890
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	FAS1 domain-containing protein
Genome location	ClcChr01:15798864..15799394
RNA-Seq Expression	Clc01G10890
Synteny	Clc01G10890
Gene Ontology terms	NA
InterPro domains	IPR036378 - FAS1 domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_008463608.1 PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Cucumis melo]

2.7e-75

88.07

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Query:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV
        MGIIIPRI+VL+SLLFLI+VS      SSQTSN T LQAAIEDMKA+SFYGFAILLQMLNITTQLTLKEITFFIPQD QLSNISIAV+HLEAFVLSHLIV
Subjt:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV

Query:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        MPLQFSDLIRFPTGSIVPSGYHNRMIRIHN+GRGHFVVNNAVVNVPNVCSSS GIKCHGVNKVI+YG  +YGNL+N
Subjt:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

XP_011648466.2 FAS1 domain-containing protein SELMODRAFT_448915, partial [Cucumis sativus]

1.5e-78

90.29

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Query:  GIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVM
        GIIIPRI VL+SLLFLI+VSSA  IVSSQTSN T LQAAIEDMKA+SFYGFAILLQMLNITTQLTLKEITFFIPQDPQ+SNISIAVD LEAFVLSH+I+M
Subjt:  GIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVM

Query:  PLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        PLQFSDLIRFPTGSIVPSGYHNRMIRIHN+GRGHFVVNNAVVNVPNVCSSS GIKCHGVNKVI+YGRA+YGNL N
Subjt:  PLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

XP_023001077.1 FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita maxima]

6.9e-63

77.84

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Query:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV
        MGII+    VL+SLLF  SV SAVP + SQT NHT+L AA+ DM+A+SFYGFAILLQMLN TTQLTL++ITFFIP DPQLSNISI  DHLE+FVLSH IV
Subjt:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV

Query:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        MPLQFSDLIRFPTGSIVPSGY NRMIRIHNHGRGHF+VNNA V +PNVCSSS GIKCHG++KVIDYG A Y N HN
Subjt:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

XP_023520235.1 FAS1 domain-containing protein SELMODRAFT_448915-like [Cucurbita pepo subsp. pepo]

7.1e-60

81.08

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Query:  SQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRI
        SQT NHT+L AA+ DM+A+SFYGFAILLQMLN TTQLTL++ITFFIP DPQLSNISI+ D LE+FVLSH IVMPLQFSDLIRFPTGSIVPSGY NRMIRI
Subjt:  SQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRI

Query:  HNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        HNHGRGHF+VNNA V VPNVCSSSEGIKCHG++KV+DYG A Y N +N
Subjt:  HNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

XP_038893487.1 FAS1 domain-containing protein SELMODRAFT_448915-like [Benincasa hispida]

1.6e-80

92.05

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Query:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV
        MG I   IFVL+SLLFLIS+SSAVPIVSSQ +NHT LQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVD LEAFVLSHLIV
Subjt:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV

Query:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        MPL+FSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSE IKCHGVNKVIDYGR SYGNL+N
Subjt:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LTE3 Uncharacterized protein

2.0e-55

92.44

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Query:  MLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKC
        MLNITTQLTLKEITFFIPQDPQ+SNISIAVD LEAFVLSH+I+MPLQFSDLIRFPTGSIVPSGYHNRMIRIHN+GRGHFVVNNAVVNVPNVCSSS GIKC
Subjt:  MLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKC

Query:  HGVNKVIDYGRASYGNLHN
        HGVNKVI+YGRA+YGNL N
Subjt:  HGVNKVIDYGRASYGNLHN

A0A1S3CJM9 FAS1 domain-containing protein SELMODRAFT_448915-like

1.3e-75

88.07

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Query:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV
        MGIIIPRI+VL+SLLFLI+VS      SSQTSN T LQAAIEDMKA+SFYGFAILLQMLNITTQLTLKEITFFIPQD QLSNISIAV+HLEAFVLSHLIV
Subjt:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV

Query:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        MPLQFSDLIRFPTGSIVPSGYHNRMIRIHN+GRGHFVVNNAVVNVPNVCSSS GIKCHGVNKVI+YG  +YGNL+N
Subjt:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

A0A5D3E4N2 FAS1 domain-containing protein

1.3e-54

92.44

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Query:  MLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKC
        MLNITTQLTLKEITFFIPQD QLSNISIAV+HLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHN+GRGHFVVNNAVVNVPNVCSSS GIKC
Subjt:  MLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKC

Query:  HGVNKVIDYGRASYGNLHN
        HGVNKVI+YG  +YGNL+N
Subjt:  HGVNKVIDYGRASYGNLHN

A0A6J1EI57 FAS1 domain-containing protein SELMODRAFT_448915-like

4.5e-60

81.08

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Query:  SQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRI
        SQT NHT+L AA+ DM+A+SFYGFAILLQMLN TTQLTL++ITFFIP DPQLSNISI  D LE+FVLSH IVMPLQFSDLIRFPTGSIVPSGY NRMIRI
Subjt:  SQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRMIRI

Query:  HNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        HNHGRGHF+VNNA V VPNVCSSSEGIKCHG++KV+DYG A Y N +N
Subjt:  HNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

A0A6J1KFG1 FAS1 domain-containing protein SELMODRAFT_448915-like

3.3e-63

77.84

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Query:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV
        MGII+    VL+SLLF  SV SAVP + SQT NHT+L AA+ DM+A+SFYGFAILLQMLN TTQLTL++ITFFIP DPQLSNISI  DHLE+FVLSH IV
Subjt:  MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIV

Query:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN
        MPLQFSDLIRFPTGSIVPSGY NRMIRIHNHGRGHF+VNNA V +PNVCSSS GIKCHG++KVIDYG A Y N HN
Subjt:  MPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

SwissProt top hits

e value

%identity

Alignment

P0DH64 FAS1 domain-containing protein SELMODRAFT_448915

5.2e-05

23.35

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Query:  IFVLISLLFLISVSSAVPIVSSQTSN------HTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNI--SIAVDHLEAFVLSHLI
        + VL+ +  +  VSS +   ++Q          + +Q  + +M  + F   A + Q L   T + ++  T  IP +  ++ +  +++ + +   +  H++
Subjt:  IFVLISLLFLISVSSAVPIVSSQTSN------HTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNI--SIAVDHLEAFVLSHLI

Query:  VMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDY
          P  F  L R   G+ +P+     MI + ++  G+F +N   +  P+VCSS+  I CHG+++V+ Y
Subjt:  VMPLQFSDLIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDY

Arabidopsis top hits

e value

%identity

Alignment

AT5G16920.1 Fasciclin-like arabinogalactan family protein

1.1e-15

33.76

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Query:  VLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQL--SNISIAVDHLEAFVLSHLIVMPLQFSD
        +   +L +I  SS     S    N+  L  AIE+M+  +++ F +L+ ML       L  +TF +P+D  L  SNI    D +  F+L H I   L F  
Subjt:  VLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQL--SNISIAVDHLEAFVLSHLIVMPLQFSD

Query:  LIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVI
        L   P GSIVPS   +  + I N GR ++ +NN  +   N+CS    IKCHG++ ++
Subjt:  LIRFPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVI

AT5G26730.1 Fasciclin-like arabinogalactan family protein

3.1e-21

37.06

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Query:  IVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRM
        I+     N T L +A+ DM+ +S+ GF ILL+ LN T      +ITF +P D  +S+  I  + LE F+L H I   L  + ++ FP  ++VP  + +RM
Subjt:  IVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIRFPTGSIVPSGYHNRM

Query:  IRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGR
          I   G     VNNA +  PNVC +S  I CHG++ VI + +
Subjt:  IRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGR

Sequences

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CDS sequence

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ATGGGCATAATTATCCCTAGAATCTTTGTCCTTATTTCTCTCTTATTCTTAATTAGTGTCTCTTCAGCAGTCCCAATAGTGTCATCTCAAACCTCAAACCACACAAGTCT
CCAAGCTGCCATTGAAGACATGAAGGCCAAATCCTTCTATGGCTTTGCCATCCTTCTCCAAATGCTCAACATCACCACCCAACTAACCCTAAAAGAAATCACCTTCTTCA
TCCCCCAAGACCCTCAGCTCTCCAATATCTCCATCGCCGTCGACCATCTTGAGGCCTTCGTCCTCAGCCATTTGATCGTCATGCCACTTCAATTCAGTGACTTGATTCGA
TTTCCAACCGGTTCCATCGTTCCTTCAGGTTACCATAATAGGATGATCAGAATCCATAACCACGGAAGAGGCCATTTTGTTGTCAATAATGCTGTAGTCAACGTTCCTAA
TGTTTGTTCTAGTTCTGAGGGTATTAAGTGTCATGGGGTTAATAAGGTTATTGATTATGGTAGGGCTTCTTATGGTAATCTTCATAATTAA

mRNA sequence

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Protein sequence

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MGIIIPRIFVLISLLFLISVSSAVPIVSSQTSNHTSLQAAIEDMKAKSFYGFAILLQMLNITTQLTLKEITFFIPQDPQLSNISIAVDHLEAFVLSHLIVMPLQFSDLIR
FPTGSIVPSGYHNRMIRIHNHGRGHFVVNNAVVNVPNVCSSSEGIKCHGVNKVIDYGRASYGNLHN

Clc01G10890 (gene) of Watermelon (cordophanus) v2 genome