; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G11060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G11060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGolgi apparatus membrane protein TVP23
Genome locationClcChr01:16192395..16197440
RNA-Seq ExpressionClc01G11060
SyntenyClc01G11060
Gene Ontology termsGO:0009306 - protein secretion (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR008564 - Golgi apparatus membrane protein TVP23-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151115.1 Golgi apparatus membrane protein-like protein ECHIDNA [Cucumis sativus]2.9e-6898.52Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

XP_022159687.1 Golgi apparatus membrane protein-like protein ECHIDNA [Momordica charantia]8.4e-6897.78Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTA AWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

XP_022961589.1 Golgi apparatus membrane protein-like protein ECHIDNA isoform X2 [Cucurbita moschata]1.2e-6695.56Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHV FKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKN+SGRILVGLRWWNEI+D+GESVWKFESLDQESL+RMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

XP_022968800.1 Golgi apparatus membrane protein-like protein ECHIDNA [Cucurbita maxima]1.2e-6695.56Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHV FKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKN+SGRILVGLRWWNEI+D+GESVWKFESLDQESL+RMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

XP_038880990.1 Golgi apparatus membrane protein-like protein ECHIDNA [Benincasa hispida]1.2e-6696.3Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQ PVENYANP+TCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWT+LGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

TrEMBL top hitse value%identityAlignment
A0A0A0L2G2 Golgi apparatus membrane protein TVP231.4e-6898.52Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

A0A1S3B4J1 Golgi apparatus membrane protein TVP231.4e-6898.52Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

A0A5D3C299 Golgi apparatus membrane protein TVP231.4e-6898.52Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

A0A6J1E0H7 Golgi apparatus membrane protein TVP234.1e-6897.78Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFF+SFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTA AWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

A0A6J1HY81 Golgi apparatus membrane protein TVP235.9e-6795.56Show/hide
Query:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK
        MDPNQPPVENYANPKTCFFHV FKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKN+SGRILVGLRWWNEI+D+GESVWKFESLDQESL+RMNKK
Subjt:  MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKK

Query:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLV+
Subjt:  DSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

SwissProt top hitse value%identityAlignment
Q29S14 Golgi apparatus membrane protein TVP23 homolog B8.9e-2038.06Show/hide
Query:  NQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFES--LDQESLSRMNKKD
        N+P      +P   FFH+ F+  A+  Y+L  LF SSF+   V  + L + DFW VKNV+GR++VGLRWWN I++ G+S W FES     +    +++ +
Subjt:  NQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFES--LDQESLSRMNKKD

Query:  SWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        S +FW  L    V W V    +L  F+  +L V+
Subjt:  SWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

Q6C7V5 Golgi apparatus membrane protein TVP235.6e-2246.15Show/hide
Query:  ANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL
        ++P    F + F+ GAL  Y+   LF   FV++FV+ V L A DFW VKN++GR++VGLRWWNE ++ GESVW FE+ D +    +N  DS +FW  LY 
Subjt:  ANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL

Query:  TAVAWTVLGIFSLIKFQ
          V W  L + +L+KFQ
Subjt:  TAVAWTVLGIFSLIKFQ

Q8IQC1 Uncharacterized Golgi apparatus membrane protein-like protein CG50219.5e-2242.19Show/hide
Query:  ENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESL-SRMNKKDSWLFWW
        + Y +P   FFH+ F+  A+  Y+    F  SF+  FV  V   + DFW VKN+SGR+LVGLRWWN ++D G S W FES + ES  SR+NK +  +FW 
Subjt:  ENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESL-SRMNKKDSWLFWW

Query:  TLYLTAVAWTVLGIFSLIKFQADYLLVM
         L L  V W +  +F+L   +  +LL++
Subjt:  TLYLTAVAWTVLGIFSLIKFQADYLLVM

Q8LEK2 Golgi apparatus membrane protein-like protein ECHIDNA1.4e-6286.23Show/hide
Query:  MDPN---QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRM
        MDPN   Q PVENYANP+TC FHVLFK  ALAFYILS+LFF+SFVIIFVVTV LAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESL+RM
Subjt:  MDPN---QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRM

Query:  NKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        NKKDSWLFWWTLYL A AW +LG+FSLI+FQADYLLV+
Subjt:  NKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM

Q9Y7K7 Golgi apparatus membrane protein tvp239.5e-2245.97Show/hide
Query:  ANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL
        ++P   FF +LF+ GA+  YIL   F SSF+++F+V   L A+D W VKNVSGR+LVGLRW NE    GES+W FES D       N  D   FW+ LYL
Subjt:  ANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLYL

Query:  TAVAWTVLGIFSLIKFQADYLLVM
            W +LGI ++I+F+  +L ++
Subjt:  TAVAWTVLGIFSLIKFQADYLLVM

Arabidopsis top hitse value%identityAlignment
AT1G09330.1 unknown protein1.0e-6386.23Show/hide
Query:  MDPN---QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRM
        MDPN   Q PVENYANP+TC FHVLFK  ALAFYILS+LFF+SFVIIFVVTV LAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESL+RM
Subjt:  MDPN---QPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRM

Query:  NKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM
        NKKDSWLFWWTLYL A AW +LG+FSLI+FQADYLLV+
Subjt:  NKKDSWLFWWTLYLTAVAWTVLGIFSLIKFQADYLLVM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCCGAACCAGCCACCTGTGGAAAATTATGCTAATCCGAAGACTTGTTTCTTTCATGTTCTTTTCAAGGCTGGAGCATTGGCTTTTTACATTCTTTCCTCTCTCTT
TTTCAGTAGTTTTGTTATCATTTTTGTGGTGACCGTTTTTCTTGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGA
ATGAAATAAATGATCTGGGTGAGAGTGTGTGGAAATTTGAAAGCCTTGATCAAGAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTAC
CTCACGGCAGTTGCATGGACTGTGCTGGGCATATTCTCGTTGATAAAGTTTCAAGCTGATTATCTCCTTGTTATGCCAAGAAGCAGTTTCAGCAATTTGCCACTCAGACC
ATTGCTTCTCAGTTCTCCTCTTCATTACAATCAGCCTTCAGTGTTGTTTGAGGCATCCATAGAATGTGAAAGAAAGCAGATGGAAGAAATGCAGTGGCACAAGAGATGTG
TTGAGCAGCAGCTCTCAGGGCATGTAAATGTGCATTATTTTAGGTATTACTGGGTTGGATTGGATTGGGGTTGCTTCTGA
mRNA sequenceShow/hide mRNA sequence
TGGAAAACTGAGTCGAAACCAAATCAAATTAAATGGTGTGAAATATTTTCTTGGCTCTGGTGGTGGTATAATTTCCCTCGGCGAGCGCATAGCGACGGAGGGGGTAGCGT
TTTCGCTTCATTTCTGCAACAAGGAAGGCAAATTCTATACTTACCCGCAAAATACTTTGTGCAATTTTTCCCCAATCTCCTGATCATGGATCCGAACCAGCCACCTGTGG
AAAATTATGCTAATCCGAAGACTTGTTTCTTTCATGTTCTTTTCAAGGCTGGAGCATTGGCTTTTTACATTCTTTCCTCTCTCTTTTTCAGTAGTTTTGTTATCATTTTT
GTGGTGACCGTTTTTCTTGCTGCTCTCGACTTTTGGGTCGTGAAGAATGTGAGCGGGCGTATATTGGTTGGTTTAAGGTGGTGGAATGAAATAAATGATCTGGGTGAGAG
TGTGTGGAAATTTGAAAGCCTTGATCAAGAGTCATTGTCTCGGATGAACAAAAAAGATTCCTGGCTGTTCTGGTGGACCTTGTACCTCACGGCAGTTGCATGGACTGTGC
TGGGCATATTCTCGTTGATAAAGTTTCAAGCTGATTATCTCCTTGTTATGCCAAGAAGCAGTTTCAGCAATTTGCCACTCAGACCATTGCTTCTCAGTTCTCCTCTTCAT
TACAATCAGCCTTCAGTGTTGTTTGAGGCATCCATAGAATGTGAAAGAAAGCAGATGGAAGAAATGCAGTGGCACAAGAGATGTGTTGAGCAGCAGCTCTCAGGGCATGT
AAATGTGCATTATTTTAGGTATTACTGGGTTGGATTGGATTGGGGTTGCTTCTGAACCACTTTTTTCTTTTTTCTTTTTTTTT
Protein sequenceShow/hide protein sequence
MDPNQPPVENYANPKTCFFHVLFKAGALAFYILSSLFFSSFVIIFVVTVFLAALDFWVVKNVSGRILVGLRWWNEINDLGESVWKFESLDQESLSRMNKKDSWLFWWTLY
LTAVAWTVLGIFSLIKFQADYLLVMPRSSFSNLPLRPLLLSSPLHYNQPSVLFEASIECERKQMEEMQWHKRCVEQQLSGHVNVHYFRYYWVGLDWGCF