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Clc01G11190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G11190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:16396305..16396694
RNA-Seq ExpressionClc01G11190
SyntenyClc01G11190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042344.1 hypothetical protein E6C27_scaffold795G00420 [Cucumis melo var. makuwa]2.6e-3571.9Show/hide
Query:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGNN-----FTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL
        MGNC+VLP VRSPQK L+GL+KAT  AT +V SA+ECGN+       S+T+TSLQVGE      CLKELENLLASSKI YSDGGGA+KVKIVVT+EQF+L
Subjt:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGNN-----FTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL

Query:  LLANAKKLQARHRLLSYTVPR
        LLANAKKLQ+R+RLLSYT PR
Subjt:  LLANAKKLQARHRLLSYTVPR

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3476.11Show/hide
Query:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL
        MGNC+VLPCVRSPQK LRG+EKATD ATT V+SATEC N     +F+S+TRTSLQVGE      CLKELE LL SSKI YSDG GARKVKIVVTKEQF+L
Subjt:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL

Query:  LLANAKKLQARHR
        LLANAKKLQ+RHR
Subjt:  LLANAKKLQARHR

KGN64995.1 hypothetical protein Csa_022837 [Cucumis sativus]8.1e-4572.86Show/hide
Query:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL
        MGNC+VLP VRSPQK LRGL+KAT+ ATT+V SATECGN     +F S+T+TSLQV E      CLKELENLLAS KI YSD  GA+KVKIVVTKEQF+L
Subjt:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL

Query:  LLANAKKLQARHRLLSYTVPRRGCQKWRPILSAIAEEEDF
        LL+NAKKLQ RHRLLSYT PR+GC+ WRP LSAI+EEEDF
Subjt:  LLANAKKLQARHRLLSYTVPRRGCQKWRPILSAIAEEEDF

XP_023542404.1 uncharacterized protein LOC111802317 [Cucurbita pepo subsp. pepo]1.9e-3060.94Show/hide
Query:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGNNFTSTTRTSLQVGECLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANAKKLQAR
        MGNC++LPCV SP KNL      +    TVV+SATE GN+        L V  CLKELENLL   K AYS GGGAR+VKIVVT+EQF+LLLANAKK+Q+ 
Subjt:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGNNFTSTTRTSLQVGECLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANAKKLQAR

Query:  HRLLSYTVPRRGCQKWRPILSAIAEEED
        +RLLSY  P RG +KWRP+LS I+EEE+
Subjt:  HRLLSYTVPRRGCQKWRPILSAIAEEED

XP_038877793.1 uncharacterized protein LOC120070018 isoform X1 [Benincasa hispida]6.6e-3972.59Show/hide
Query:  VLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANA
        VL   + PQK LR LEKATD       SATECG      +FTS TRT LQVGE      CLKELENLLASSKIAYSDG GARKVKIVVTKEQF+LLLANA
Subjt:  VLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANA

Query:  KKLQARHRLLSYTVPRRGCQKWRPILSAIAEEEDF
        KKLQ+RHRLLSYT PR+GC+KWRP LSAI+EEEDF
Subjt:  KKLQARHRLLSYTVPRRGCQKWRPILSAIAEEEDF

TrEMBL top hitse value%identityAlignment
A0A0A0LSY9 Uncharacterized protein3.9e-4572.86Show/hide
Query:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL
        MGNC+VLP VRSPQK LRGL+KAT+ ATT+V SATECGN     +F S+T+TSLQV E      CLKELENLLAS KI YSD  GA+KVKIVVTKEQF+L
Subjt:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGN-----NFTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL

Query:  LLANAKKLQARHRLLSYTVPRRGCQKWRPILSAIAEEEDF
        LL+NAKKLQ RHRLLSYT PR+GC+ WRP LSAI+EEEDF
Subjt:  LLANAKKLQARHRLLSYTVPRRGCQKWRPILSAIAEEEDF

A0A2K3MR02 Uncharacterized protein6.8e-0533.33Show/hide
Query:  MGNCVVLPCVRSPQKN-----LRGLEKATDSATTVVESATECGNNFTSTTRTSLQVGECLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANAK
        MGNCV   C   P+K      ++G E   + A+  VE      +      R  +Q GE       L  S +         R VKIVVT EQ E+LL+ +K
Subjt:  MGNCVVLPCVRSPQKN-----LRGLEKATDSATTVVESATECGNNFTSTTRTSLQVGECLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANAK

Query:  KLQARHRLLSYTVPR-RGCQKWRPILSAIAEEEDF
        K Q + R+   T      C KW P LS I E ++F
Subjt:  KLQARHRLLSYTVPR-RGCQKWRPILSAIAEEEDF

A0A2Z6NQK5 Uncharacterized protein1.4e-0534.56Show/hide
Query:  MGNCVVLPCVRSPQKNLR-----GLEKATDSATTVVESATECGNNFTSTTRTSLQVGECLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANAK
        MGNCV   C   P+K  R     G E   +SA+  VE      +      R  +Q GE       L  S           R  KIVVT +Q ELLL+ +K
Subjt:  MGNCVVLPCVRSPQKNLR-----GLEKATDSATTVVESATECGNNFTSTTRTSLQVGECLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANAK

Query:  KLQARHRLLSYTVPR--RGCQKWRPILSAIAEEEDF
        K Q + R+ S T     R C KW P L  I E ++F
Subjt:  KLQARHRLLSYTVPR--RGCQKWRPILSAIAEEEDF

A0A5D3CW41 Uncharacterized protein1.3e-3571.9Show/hide
Query:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGNN-----FTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL
        MGNC+VLP VRSPQK L+GL+KAT  AT +V SA+ECGN+       S+T+TSLQVGE      CLKELENLLASSKI YSDGGGA+KVKIVVT+EQF+L
Subjt:  MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGNN-----FTSTTRTSLQVGE------CLKELENLLASSKIAYSDGGGARKVKIVVTKEQFEL

Query:  LLANAKKLQARHRLLSYTVPR
        LLANAKKLQ+R+RLLSYT PR
Subjt:  LLANAKKLQARHRLLSYTVPR

A0A5N6Q7Y4 Uncharacterized protein6.8e-0550Show/hide
Query:  SSKIAYSDGGGARKVKIVVTKEQFELLLANAKKLQ----ARHRLLSYTVPRRGCQKWRPILSAIAEEEDF
        +S+ A  D G  RKVKIVVTKEQ ELLL + KK Q    A   L S  V   GC+KW+P L+ I E   F
Subjt:  SSKIAYSDGGGARKVKIVVTKEQFELLLANAKKLQ----ARHRLLSYTVPRRGCQKWRPILSAIAEEEDF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAACTGCGTGGTCTTGCCTTGCGTCCGGTCGCCGCAGAAGAATCTTAGAGGGCTCGAGAAAGCCACTGATTCAGCTACAACTGTTGTTGAGTCTGCTACAGAGTG
CGGTAATAATTTTACTTCTACAACCAGAACCAGCCTCCAAGTTGGCGAATGCTTGAAAGAGCTCGAAAATCTTCTGGCTTCCTCAAAGATAGCCTACTCGGATGGAGGGG
GAGCAAGGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTGAGTTGCTGTTGGCAAATGCAAAGAAGTTGCAAGCTCGACATAGATTGTTGAGCTATACAGTCCCCCGT
AGAGGGTGTCAAAAATGGCGGCCGATTTTGTCTGCAATCGCGGAGGAAGAAGATTTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAACTGCGTGGTCTTGCCTTGCGTCCGGTCGCCGCAGAAGAATCTTAGAGGGCTCGAGAAAGCCACTGATTCAGCTACAACTGTTGTTGAGTCTGCTACAGAGTG
CGGTAATAATTTTACTTCTACAACCAGAACCAGCCTCCAAGTTGGCGAATGCTTGAAAGAGCTCGAAAATCTTCTGGCTTCCTCAAAGATAGCCTACTCGGATGGAGGGG
GAGCAAGGAAGGTGAAGATTGTGGTAACTAAGGAACAGTTTGAGTTGCTGTTGGCAAATGCAAAGAAGTTGCAAGCTCGACATAGATTGTTGAGCTATACAGTCCCCCGT
AGAGGGTGTCAAAAATGGCGGCCGATTTTGTCTGCAATCGCGGAGGAAGAAGATTTTTGA
Protein sequenceShow/hide protein sequence
MGNCVVLPCVRSPQKNLRGLEKATDSATTVVESATECGNNFTSTTRTSLQVGECLKELENLLASSKIAYSDGGGARKVKIVVTKEQFELLLANAKKLQARHRLLSYTVPR
RGCQKWRPILSAIAEEEDF