; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G11220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G11220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationClcChr01:16749919..16752089
RNA-Seq ExpressionClc01G11220
SyntenyClc01G11220
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0051899.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.4e-4647.74Show/hide
Query:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL
        SVN V++RG+    PQ       G   +   G  G N  ++RG+G SR    P C+VCG + HT D+CYNRFNK+F PN  +N N  ++NNFRNNN K  
Subjt:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL

Query:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA
        TA V +H  NPF    E++VD +        N +                  VT GNG+ L+I SI N+ L NG Y L+L+N+L+VP IAK+LVSVSK A
Subjt:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA

Query:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK
        +D + F+EFH++YCLVKD G+RQTILKG+L+D LYHLEEA+VK
Subjt:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK

TYJ99887.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]8.8e-4748.15Show/hide
Query:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL
        SVN V++RG+    PQ       G   +   G  G N  ++RG+G SR    P C+VCG + HT D+CYNRFNK+F PN  +N N  ++NNFRNNN K  
Subjt:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL

Query:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA
        TA V +H  NPF    E++VD +        N +                  VT GNG+ L+I SI N+ L NG Y L+L+N+L+VP IAKNLVSVSK A
Subjt:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA

Query:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK
        +D + F+EFH++YCLVKD G+RQTILKG+L+D LYHLEEA+VK
Subjt:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK

TYK05754.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]1.8e-3941.61Show/hide
Query:  ISRKPDITWLQMQSELLSYEKRLEAQNSQRNEVTSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSR-NRPACQVCGNVSH
        I  KP+I+W+ MQSELL++EKRLE Q++Q+N        VN+  +R +   +  +   Q HG  R+   GQ GG     RG+G  R N+P CQVC    H
Subjt:  ISRKPDITWLQMQSELLSYEKRLEAQNSQRNEVTSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSR-NRPACQVCGNVSH

Query:  TADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPLTAMVATHNENPFT---------------SNYESTVDQSN----------ELVTAGNGNTLQIA
        +A VCYNRFNKEF     Q++ + SSN  +++N   LT +V   + N F                +    TV+ SN          E +  GNG++L I+
Subjt:  TADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPLTAMVATHNENPFT---------------SNYESTVDQSN----------ELVTAGNGNTLQIA

Query:  SIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLE
         I N +LT+G   LNL N+L VPDI KNLVSVSKLA+D+N +IEFH  YC +KDK + +T+L   ++D LYHL+
Subjt:  SIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLE

XP_016902197.1 PREDICTED: uncharacterized protein LOC107991581 isoform X1 [Cucumis melo]9.4e-5738.53Show/hide
Query:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN
        A  ++ PP+++ +  FS+PPLNQ+LNQ+TT+K           LAL IL  Y++EG+L  +  CP    +S  ++N  VT E            T  ++N
Subjt:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN

Query:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR
        P++E W+  D LLLGWLYNSMTP VA QLMGF      W++  D                     KG+D         I  KPDI+WL MQS+LL +EKR
Subjt:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR

Query:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNVSHTADVCYNRFNKEFTPNFNQNK
        L+ QN+Q+      +++P++NM        Q+ Q+   + +G  R  +SGQ G             N P CQ+CG   H+A VCYNRFNKEF+    QN+
Subjt:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNVSHTADVCYNRFNKEFTPNFNQNK

Query:  NSASSNNFRNNNRKPLTAMVATHNENPFT------------------------SNYESTVDQSN-ELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILH
        N  SSN   + N       V+T N  PF                         SN  +  + S  E VT GNGN L I+ + NT LT+G  SL L NIL 
Subjt:  NSASSNNFRNNNRKPLTAMVATHNENPFT------------------------SNYESTVDQSN-ELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILH

Query:  VPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGS
        VPDIAKNL+SVSKLA+D++ +IEFH   C +KDK +
Subjt:  VPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGS

XP_016902204.1 PREDICTED: uncharacterized protein LOC107991581 isoform X4 [Cucumis melo]1.1e-4435.35Show/hide
Query:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN
        A  ++ PP+++ +  FS+PPLNQ+LNQ+TT+K           LAL IL  Y++EG+L  +  CP    +S  ++N  VT E            T  ++N
Subjt:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN

Query:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR
        P++E W+  D LLLGWLYNSMTP VA QLMGF      W++  D                     KG+D         I  KPDI+WL MQS+LL +EKR
Subjt:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR

Query:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVC--GNVSHTADVCYNRFNKEFTPNFNQ
        L+ QN+Q+      +++P++NM        Q+ Q+   + +G  R  +SGQ G             N P CQ+C  G  +H    C N  N         
Subjt:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVC--GNVSHTADVCYNRFNKEFTPNFNQ

Query:  NKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYESTVDQSNELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIE
                                            T     E VT GNGN L I+ + NT LT+G  SL L NIL VPDIAKNL+SVSKLA+D++ +IE
Subjt:  NKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYESTVDQSNELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIE

Query:  FHNNYCLVKDKGS
        FH   C +KDK +
Subjt:  FHNNYCLVKDKGS

TrEMBL top hitse value%identityAlignment
A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X14.6e-5738.53Show/hide
Query:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN
        A  ++ PP+++ +  FS+PPLNQ+LNQ+TT+K           LAL IL  Y++EG+L  +  CP    +S  ++N  VT E            T  ++N
Subjt:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN

Query:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR
        P++E W+  D LLLGWLYNSMTP VA QLMGF      W++  D                     KG+D         I  KPDI+WL MQS+LL +EKR
Subjt:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR

Query:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNVSHTADVCYNRFNKEFTPNFNQNK
        L+ QN+Q+      +++P++NM        Q+ Q+   + +G  R  +SGQ G             N P CQ+CG   H+A VCYNRFNKEF+    QN+
Subjt:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNVSHTADVCYNRFNKEFTPNFNQNK

Query:  NSASSNNFRNNNRKPLTAMVATHNENPFT------------------------SNYESTVDQSN-ELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILH
        N  SSN   + N       V+T N  PF                         SN  +  + S  E VT GNGN L I+ + NT LT+G  SL L NIL 
Subjt:  NSASSNNFRNNNRKPLTAMVATHNENPFT------------------------SNYESTVDQSN-ELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILH

Query:  VPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGS
        VPDIAKNL+SVSKLA+D++ +IEFH   C +KDK +
Subjt:  VPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGS

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X45.2e-4535.35Show/hide
Query:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN
        A  ++ PP+++ +  FS+PPLNQ+LNQ+TT+K           LAL IL  Y++EG+L  +  CP    +S  ++N  VT E            T  ++N
Subjt:  ANASSNPPTVTRTPDFSSPPLNQLLNQITTIK-----------LALLILCGYQIEGYLIGQKVCPP---ISQVATNDIVTHE------------TTEVIN

Query:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR
        P++E W+  D LLLGWLYNSMTP VA QLMGF      W++  D                     KG+D         I  KPDI+WL MQS+LL +EKR
Subjt:  PVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSAS-WESRFD---------------------KGID---------ISRKPDITWLQMQSELLSYEKR

Query:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVC--GNVSHTADVCYNRFNKEFTPNFNQ
        L+ QN+Q+      +++P++NM        Q+ Q+   + +G  R  +SGQ G             N P CQ+C  G  +H    C N  N         
Subjt:  LEAQNSQRNEV--TSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVC--GNVSHTADVCYNRFNKEFTPNFNQ

Query:  NKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYESTVDQSNELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIE
                                            T     E VT GNGN L I+ + NT LT+G  SL L NIL VPDIAKNL+SVSKLA+D++ +IE
Subjt:  NKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYESTVDQSNELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIE

Query:  FHNNYCLVKDKGS
        FH   C +KDK +
Subjt:  FHNNYCLVKDKGS

A0A5A7UEH3 Retrovirus-related Pol polyprotein from transposon TNT 1-941.6e-4647.74Show/hide
Query:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL
        SVN V++RG+    PQ       G   +   G  G N  ++RG+G SR    P C+VCG + HT D+CYNRFNK+F PN  +N N  ++NNFRNNN K  
Subjt:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL

Query:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA
        TA V +H  NPF    E++VD +        N +                  VT GNG+ L+I SI N+ L NG Y L+L+N+L+VP IAK+LVSVSK A
Subjt:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA

Query:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK
        +D + F+EFH++YCLVKD G+RQTILKG+L+D LYHLEEA+VK
Subjt:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK

A0A5D3BL83 Retrovirus-related Pol polyprotein from transposon TNT 1-944.3e-4748.15Show/hide
Query:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL
        SVN V++RG+    PQ       G   +   G  G N  ++RG+G SR    P C+VCG + HT D+CYNRFNK+F PN  +N N  ++NNFRNNN K  
Subjt:  SVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNR--PACQVCGNVSHTADVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPL

Query:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA
        TA V +H  NPF    E++VD +        N +                  VT GNG+ L+I SI N+ L NG Y L+L+N+L+VP IAKNLVSVSK A
Subjt:  TAMVATHNENPFTSNYESTVDQS--------NEL------------------VTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSVSKLA

Query:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK
        +D + F+EFH++YCLVKD G+RQTILKG+L+D LYHLEEA+VK
Subjt:  KDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVK

A0A803PEH4 Uncharacterized protein1.7e-4033.47Show/hide
Query:  ANASSNPPTVTRTPD-FSSPPLNQLL------NQITTIK-LALLILCGYQIEGYLIGQKVCPPISQVATNDIVTHETTEVINPVYEAWLIVDQLLLGWLY
        A++S+N    ++ P+ F+ P LNQ        N  T  K +   I+ G+++ GYL G  +CPP       + V    T+V NP YE W+I DQLL+GWLY
Subjt:  ANASSNPPTVTRTPD-FSSPPLNQLL------NQITTIK-LALLILCGYQIEGYLIGQKVCPPISQVATNDIVTHETTEVINPVYEAWLIVDQLLLGWLY

Query:  NSMTPKVATQLMGFERSASWE------------SRFD----------KG----------------------------------------------IDISR
        +SMT  +AT++MG   +A+ +            S+ D          KG                                              + I  
Subjt:  NSMTPKVATQLMGFERSASWE------------SRFD----------KG----------------------------------------------IDISR

Query:  KPDITWLQMQSELLSYEKRLEAQNS---QRNEVTSKNPSVNMV-----NSRGAGPQQPQNPTSQSHGRGRSQYSGQHG-GNQFENRGQGM-SRNRPACQV
        + + TW ++Q  LLS++ ++E   +     N+ TS +P  NM      N RG G  Q QN ++ S G     +S   G  N+F  RG+G  S +RP CQV
Subjt:  KPDITWLQMQSELLSYEKRLEAQNS---QRNEVTSKNPSVNMV-----NSRGAGPQQPQNPTSQSHGRGRSQYSGQHG-GNQFENRGQGM-SRNRPACQV

Query:  CGNVSHTADVCYNRFNKEF---TPNFNQNKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYES-------TVDQSN----------ELVTAGNGNTLQI
         G   HTA VCYNRF++ +    PN   N+N A   N  NN+    +A VAT     F + +         T D +N          E V  GNG+ L+I
Subjt:  CGNVSHTADVCYNRFNKEF---TPNFNQNKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYES-------TVDQSN----------ELVTAGNGNTLQI

Query:  ASIANTFLT--NGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVKPS
          I N  L   +G Y L L ++L VP IAKNLVSVSKLA D+N  IEF++N+CLVKDK +++ +L G+L+D LY L+    K S
Subjt:  ASIANTFLT--NGKYSLNLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVKPS

SwissProt top hitse value%identityAlignment
Q94HW2 Retrovirus-related Pol polyprotein from transposon RE13.0e-0526.95Show/hide
Query:  TWLQMQSELLSYEKRLEAQNS------QRNEVTSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNVSHTA
        T  ++   LL++E ++ A +S        N V+ +N +    N+ G    +  N  + ++ +   Q S     N  +++          CQ+CG   H+A
Subjt:  TWLQMQSELLSYEKRLEAQNS------QRNEVTSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNVSHTA

Query:  DVC------YNRFNKE-----FTPNFNQNKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYES-TVDQ---SNELVTAGNGNTLQIASIANTFLTNGKY
          C       +  N +     FTP +    N A  + + +NN   L    ATH+    TS++ + ++ Q     + V   +G+T+ I+   +T L+    
Subjt:  DVC------YNRFNKE-----FTPNFNQNKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYES-TVDQ---SNELVTAGNGNTLQIASIANTFLTNGKY

Query:  SLNLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVKPSVVPVRLAAACESK
         LNL+NIL+VP+I KNL+SV +L   +   +EF      VKD  +   +L+G  +D LY    A    S  PV L A+  SK
Subjt:  SLNLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVKPSVVPVRLAAACESK

Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE21.5e-0425.29Show/hide
Query:  PDITWLQMQSELLSYEKRLEAQNSQR------NEVTSKNPSVNM-VNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNV
        P +T  ++   L++ E +L A NS        N VT +N + N   N+RG       N    ++    + +     G++ +NR       R  CQ+C   
Subjt:  PDITWLQMQSELLSYEKRLEAQNSQR------NEVTSKNPSVNM-VNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNV

Query:  SHTADVCYNRFNKEFTPNFNQN---------KNSASSNNFRNNNRKPLTAMVATHNENPFTSNYESTVDQSNELVTAGNGNTLQIASIANTFLTNGKYSL
         H+A  C      + T N  Q+         + + + N+  N N   L +    H  + F +          + V   +G+T+ I    +  L     SL
Subjt:  SHTADVCYNRFNKEFTPNFNQN---------KNSASSNNFRNNNRKPLTAMVATHNENPFTSNYESTVDQSNELVTAGNGNTLQIASIANTFLTNGKYSL

Query:  NLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLY
        +LN +L+VP+I KNL+SV +L   +   +EF      VKD  +   +L+G  +D LY
Subjt:  NLNNILHVPDIAKNLVSVSKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLY

Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCGAGCCCTGGATGTTGCTCCTCCCCGTCTACCGCCGTCATGTAGTACCGCTCATCCTGGTTCCGTGTTATTTGATTTCTCTGATGTTTGTTCGCCGTTT
AGCACAATTGTTTGTTCATCTCTAATTGCCACTGGTCGTAGATGTGGGCTGTTATCCATTAAGGAAAAAGAAGAGTCAAAGGTACAATCAGCTATGTCACGGTGT
ACAACCTTATACAGTCAGCTGAGCAAAAGATTCAAAGTCACCAATATTCTAGAAAAATCGAGCCGAATAGCTAACGCCTCTAGCAATCCTCCAACAGTCACCAGA
ACACCTGATTTCAGTAGCCCTCCATTGAACCAACTGCTGAACCAAATCACCACTATTAAGCTAGCTCTCCTCATCCTTTGTGGCTACCAAATTGAAGGCTATCTC
ATAGGGCAAAAGGTTTGCCCACCCATCTCTCAAGTCGCAACCAACGACATTGTGACCCACGAGACAACCGAAGTCATCAATCCAGTGTATGAAGCATGGCTCATT
GTTGACCAGCTGCTCCTGGGTTGGCTCTACAACTCCATGACACCTAAAGTGGCCACACAGCTCATGGGCTTTGAACGATCGGCAAGCTGGGAGTCCCGTTTTGAC
AAGGGCATTGATATCTCAAGAAAGCCAGATATCACATGGCTACAAATGCAATCTGAGCTCCTGTCCTACGAAAAGAGGCTAGAAGCTCAAAATTCACAAAGAAAC
GAAGTCACAAGCAAAAATCCATCTGTGAACATGGTTAATAGCAGAGGAGCTGGACCTCAACAACCACAAAATCCGACATCACAAAGCCATGGACGTGGCAGAAGT
CAATACAGTGGGCAACACGGAGGAAATCAATTCGAAAATAGAGGACAAGGTATGAGTAGAAATCGACCAGCTTGTCAAGTTTGTGGGAATGTTAGTCACACTGCA
GATGTGTGTTACAATCGATTCAACAAGGAATTCACTCCCAACTTCAATCAGAACAAAAATAGCGCCAGTAGCAACAACTTCAGAAACAACAATAGGAAACCTCTT
ACTGCCATGGTTGCCACACATAATGAAAATCCCTTCACTTCGAATTATGAAAGCACAGTCGATCAAAGTAATGAGTTGGTAACTGCTGGCAATGGTAATACATTG
CAGATTGCTTCTATTGCTAATACGTTTTTGACTAATGGAAAGTATTCATTGAATTTGAATAATATACTGCATGTTCCTGATATTGCTAAAAATCTTGTTAGTGTA
TCTAAATTGGCCAAGGATAGTAACGCTTTCATTGAATTTCACAATAACTATTGTCTTGTAAAGGACAAGGGTTCGAGGCAAACAATTTTGAAGGGCATACTTAGA
GATAGGTTGTATCATCTAGAAGAAGCTATTGTGAAACCTAGTGTTGTTCCGGTGAGACTTGCTGCTGCTTGTGAATCCAAGATGGTTGTGAATATAAATAAATCC
AAGATGGTTGTATCTAAAACTACTTGGCATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCGAGCCCTGGATGTTGCTCCTCCCCGTCTACCGCCGTCATGTAGTACCGCTCATCCTGGTTCCGTGTTATTTGATTTCTCTGATGTTTGTTCGCCGTTT
AGCACAATTGTTTGTTCATCTCTAATTGCCACTGGTCGTAGATGTGGGCTGTTATCCATTAAGGAAAAAGAAGAGTCAAAGGTACAATCAGCTATGTCACGGTGT
ACAACCTTATACAGTCAGCTGAGCAAAAGATTCAAAGTCACCAATATTCTAGAAAAATCGAGCCGAATAGCTAACGCCTCTAGCAATCCTCCAACAGTCACCAGA
ACACCTGATTTCAGTAGCCCTCCATTGAACCAACTGCTGAACCAAATCACCACTATTAAGCTAGCTCTCCTCATCCTTTGTGGCTACCAAATTGAAGGCTATCTC
ATAGGGCAAAAGGTTTGCCCACCCATCTCTCAAGTCGCAACCAACGACATTGTGACCCACGAGACAACCGAAGTCATCAATCCAGTGTATGAAGCATGGCTCATT
GTTGACCAGCTGCTCCTGGGTTGGCTCTACAACTCCATGACACCTAAAGTGGCCACACAGCTCATGGGCTTTGAACGATCGGCAAGCTGGGAGTCCCGTTTTGAC
AAGGGCATTGATATCTCAAGAAAGCCAGATATCACATGGCTACAAATGCAATCTGAGCTCCTGTCCTACGAAAAGAGGCTAGAAGCTCAAAATTCACAAAGAAAC
GAAGTCACAAGCAAAAATCCATCTGTGAACATGGTTAATAGCAGAGGAGCTGGACCTCAACAACCACAAAATCCGACATCACAAAGCCATGGACGTGGCAGAAGT
CAATACAGTGGGCAACACGGAGGAAATCAATTCGAAAATAGAGGACAAGGTATGAGTAGAAATCGACCAGCTTGTCAAGTTTGTGGGAATGTTAGTCACACTGCA
GATGTGTGTTACAATCGATTCAACAAGGAATTCACTCCCAACTTCAATCAGAACAAAAATAGCGCCAGTAGCAACAACTTCAGAAACAACAATAGGAAACCTCTT
ACTGCCATGGTTGCCACACATAATGAAAATCCCTTCACTTCGAATTATGAAAGCACAGTCGATCAAAGTAATGAGTTGGTAACTGCTGGCAATGGTAATACATTG
CAGATTGCTTCTATTGCTAATACGTTTTTGACTAATGGAAAGTATTCATTGAATTTGAATAATATACTGCATGTTCCTGATATTGCTAAAAATCTTGTTAGTGTA
TCTAAATTGGCCAAGGATAGTAACGCTTTCATTGAATTTCACAATAACTATTGTCTTGTAAAGGACAAGGGTTCGAGGCAAACAATTTTGAAGGGCATACTTAGA
GATAGGTTGTATCATCTAGAAGAAGCTATTGTGAAACCTAGTGTTGTTCCGGTGAGACTTGCTGCTGCTTGTGAATCCAAGATGGTTGTGAATATAAATAAATCC
AAGATGGTTGTATCTAAAACTACTTGGCATTGA
Protein sequenceShow/hide protein sequence
MSRALDVAPPRLPPSCSTAHPGSVLFDFSDVCSPFSTIVCSSLIATGRRCGLLSIKEKEESKVQSAMSRCTTLYSQLSKRFKVTNILEKSSRIANASSNPPTVTR
TPDFSSPPLNQLLNQITTIKLALLILCGYQIEGYLIGQKVCPPISQVATNDIVTHETTEVINPVYEAWLIVDQLLLGWLYNSMTPKVATQLMGFERSASWESRFD
KGIDISRKPDITWLQMQSELLSYEKRLEAQNSQRNEVTSKNPSVNMVNSRGAGPQQPQNPTSQSHGRGRSQYSGQHGGNQFENRGQGMSRNRPACQVCGNVSHTA
DVCYNRFNKEFTPNFNQNKNSASSNNFRNNNRKPLTAMVATHNENPFTSNYESTVDQSNELVTAGNGNTLQIASIANTFLTNGKYSLNLNNILHVPDIAKNLVSV
SKLAKDSNAFIEFHNNYCLVKDKGSRQTILKGILRDRLYHLEEAIVKPSVVPVRLAAACESKMVVNINKSKMVVSKTTWH