; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G11460 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G11460
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPentatricopeptide repeat-containing protein, putative
Genome locationClcChr01:17757285..17757875
RNA-Seq ExpressionClc01G11460
SyntenyClc01G11460
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056820.1 putative pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]4.0e-9689.06Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVPS+V+YNLLIDGWCK+GDID+AIL LSKMNEENR+PTIITYTTLIDGCCNSGRPDDA++LWNEMQQKGCSPNRIAYMAIVHGLCKCG+PDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL
        VYYHRMEEKEMKPDSYVSVALIDAFISKH+F MA H+LKETIEKGNIP+ +DKNYV +RDAIFKLSEDEQTGLGVKSLIEKG IPTI VSCL
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL

KAG6601988.1 putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8882.9Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVP++VTYNLLIDGWCKSGDIDQAI  LS+MN ENR+PTIITYTTLIDGCCNSGRPDDAE+LWNEMQQKGC PNRIAYMAIVHGLCKCGRPDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR
        VYYHRMEEKEMKPDSYVSVALIDA +SK +F MAL+IL+  +E G +PD +DKNYV +RDAIFKLSEDE+TG GV+SLIEKGSIPTIS+S L+
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR

KAG7032685.1 putative pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]8.1e-8982.9Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVP++VTYNLLIDGWCKSGDIDQAI  LS+MN ENR+PTIITYTTLIDGCCNSGRPDDAE+LWNEMQQKGC PNRIAYMAIVHGLCKCGRPDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR
        VYYHRMEEKEMKPDSYVSVALIDA +SK +F MAL+IL++ +E G +PD +DKNYV +RDAIFKLSEDE+TG GV+SLIEKGSIPTIS+S L+
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR

XP_008452421.1 PREDICTED: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Cucumis melo]4.0e-9689.06Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVPS+V+YNLLIDGWCK+GDID+AIL LSKMNEENR+PTIITYTTLIDGCCNSGRPDDA++LWNEMQQKGCSPNRIAYMAIVHGLCKCG+PDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL
        VYYHRMEEKEMKPDSYVSVALIDAFISKH+F MA H+LKETIEKGNIP+ +DKNYV +RDAIFKLSEDEQTGLGVKSLIEKG IPTI VSCL
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL

XP_038894372.1 LOW QUALITY PROTEIN: putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial [Benincasa hispida]1.6e-9790.67Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        M VA LVPS+VTYNLLIDGWCKSGDIDQAI  LSKMNE+NR+PTIITYTTLIDGCCNSGRPDDAE+ WNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR
        VYYHRMEEKEMKPDSYVSVALIDAFISKH+F MALHILK+TIEKGNIPD +DK YV +RDAI KLSEDEQTGLGVKSLIEKGSIPTISVSCLR
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR

TrEMBL top hitse value%identityAlignment
A0A1S3BTR3 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial1.9e-9689.06Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVPS+V+YNLLIDGWCK+GDID+AIL LSKMNEENR+PTIITYTTLIDGCCNSGRPDDA++LWNEMQQKGCSPNRIAYMAIVHGLCKCG+PDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL
        VYYHRMEEKEMKPDSYVSVALIDAFISKH+F MA H+LKETIEKGNIP+ +DKNYV +RDAIFKLSEDEQTGLGVKSLIEKG IPTI VSCL
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL

A0A5A7UP07 Putative pentatricopeptide repeat-containing protein1.9e-9689.06Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVPS+V+YNLLIDGWCK+GDID+AIL LSKMNEENR+PTIITYTTLIDGCCNSGRPDDA++LWNEMQQKGCSPNRIAYMAIVHGLCKCG+PDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL
        VYYHRMEEKEMKPDSYVSVALIDAFISKH+F MA H+LKETIEKGNIP+ +DKNYV +RDAIFKLSEDEQTGLGVKSLIEKG IPTI VSCL
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCL

A0A6J1JQU8 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X31.1e-8882.38Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVP++VTYNLLIDGWCKSGDIDQAI  LS+MN ENR+PTIITYTTLIDGCCNSGRPDDAE+LWNEMQQKGC PNRIAYMAIVHGLCKCGRPDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR
        VYYHRMEEKEMKPDSYVSVA+IDA +SK +F MAL+IL++ +E G +PD +DKNYV +RDAIFKLSEDE+TG GV+SLIEKGSIPTIS+S L+
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR

A0A6J1JSS2 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X21.1e-8882.38Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVP++VTYNLLIDGWCKSGDIDQAI  LS+MN ENR+PTIITYTTLIDGCCNSGRPDDAE+LWNEMQQKGC PNRIAYMAIVHGLCKCGRPDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR
        VYYHRMEEKEMKPDSYVSVA+IDA +SK +F MAL+IL++ +E G +PD +DKNYV +RDAIFKLSEDE+TG GV+SLIEKGSIPTIS+S L+
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR

A0A6J1JU29 putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial isoform X11.1e-8882.38Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        MIVA LVP++VTYNLLIDGWCKSGDIDQAI  LS+MN ENR+PTIITYTTLIDGCCNSGRPDDAE+LWNEMQQKGC PNRIAYMAIVHGLCKCGRPDEAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR
        VYYHRMEEKEMKPDSYVSVA+IDA +SK +F MAL+IL++ +E G +PD +DKNYV +RDAIFKLSEDE+TG GV+SLIEKGSIPTIS+S L+
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLR

SwissProt top hitse value%identityAlignment
P0C8Q6 Putative pentatricopeptide repeat-containing protein At5g08310, mitochondrial1.0e-4644.97Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        M+   L P++ TYN +IDGWCK G+ID+ +  + +M E+ ++P +ITYT+LI G C SGRP +A   WNEM+ K C PNRI +MA++ GLCKCG   EAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISV
        VY+  MEEKEM+PDS V ++L+ +F+S  +      I +E + KG  P   D+NY++  +   K  ED +T   +  LI+ G IP ++V
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISV

Q9CAN0 Pentatricopeptide repeat-containing protein At1g63130, mitochondrial5.2e-2236.24Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        M+V    P +VTY ++++G CK GDID A+ LL KM +   +P ++ Y T+ID  CN    +DA  L+ EM  KG  PN + Y +++  LC  GR  +A 
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPD
             M E+++ P+     ALIDAF+ +     A  +  E I++   PD
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPD

Q9FIX3 Pentatricopeptide repeat-containing protein At5g397101.6e-2332.4Show/hide
Query:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME
        PS+VTYN LI+G C +G ++ AI +L  M E+   P +++Y+T++ G C S   D+A  +  EM +KG  P+ I Y +++ G C+  R  EA   Y  M 
Subjt:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME

Query:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPT
           + PD +   ALI+A+  +     AL +  E +EKG +PD     Y ++ + + K S   +    +  L  + S+P+
Subjt:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPT

Q9LR67 Pentatricopeptide repeat-containing protein At1g03560, mitochondrial1.6e-2333.86Show/hide
Query:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME
        P++  Y +LIDG+ KSG ++ AI LL +M +E   P ++TY+ +++G C +GR ++A   ++  +  G + N + Y +++ GL K GR DEA   +  M 
Subjt:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME

Query:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLRGQS
        EK    DSY   ALIDAF        A+ + K   E+    DQ+   Y I+   +FK   +E+       +I+KG  PT   +C R  S
Subjt:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLRGQS

Q9LSL9 Pentatricopeptide repeat-containing protein At5g655601.8e-2236.48Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        M+  +++P +VTYN LIDG C+SG+ D A  LLS MN+    P   TYT++ID  C S R ++A  L++ ++QKG +PN + Y A++ G CK G+ DEA 
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVR
        +   +M  K   P+S    ALI    +      A  + ++ ++ G  P  S    +I R
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVR

Arabidopsis top hitse value%identityAlignment
AT1G03560.1 Pentatricopeptide repeat (PPR-like) superfamily protein1.2e-2433.86Show/hide
Query:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME
        P++  Y +LIDG+ KSG ++ AI LL +M +E   P ++TY+ +++G C +GR ++A   ++  +  G + N + Y +++ GL K GR DEA   +  M 
Subjt:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME

Query:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLRGQS
        EK    DSY   ALIDAF        A+ + K   E+    DQ+   Y I+   +FK   +E+       +I+KG  PT   +C R  S
Subjt:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLRGQS

AT1G63130.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.7e-2336.24Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        M+V    P +VTY ++++G CK GDID A+ LL KM +   +P ++ Y T+ID  CN    +DA  L+ EM  KG  PN + Y +++  LC  GR  +A 
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPD
             M E+++ P+     ALIDAF+ +     A  +  E I++   PD
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPD

AT5G08310.1 Tetratricopeptide repeat (TPR)-like superfamily protein7.4e-4844.97Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        M+   L P++ TYN +IDGWCK G+ID+ +  + +M E+ ++P +ITYT+LI G C SGRP +A   WNEM+ K C PNRI +MA++ GLCKCG   EAL
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISV
        VY+  MEEKEM+PDS V ++L+ +F+S  +      I +E + KG  P   D+NY++  +   K  ED +T   +  LI+ G IP ++V
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISV

AT5G39710.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-2432.4Show/hide
Query:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME
        PS+VTYN LI+G C +G ++ AI +L  M E+   P +++Y+T++ G C S   D+A  +  EM +KG  P+ I Y +++ G C+  R  EA   Y  M 
Subjt:  PSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRME

Query:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPT
           + PD +   ALI+A+  +     AL +  E +EKG +PD     Y ++ + + K S   +    +  L  + S+P+
Subjt:  EKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPT

AT5G65560.1 Pentatricopeptide repeat (PPR) superfamily protein1.3e-2336.48Show/hide
Query:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL
        M+  +++P +VTYN LIDG C+SG+ D A  LLS MN+    P   TYT++ID  C S R ++A  L++ ++QKG +PN + Y A++ G CK G+ DEA 
Subjt:  MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEAL

Query:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVR
        +   +M  K   P+S    ALI    +      A  + ++ ++ G  P  S    +I R
Subjt:  VYYHRMEEKEMKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGTGGCAAGGCTTGTCCCTTCAATTGTTACCTATAATCTTCTTATTGATGGATGGTGCAAAAGTGGTGATATTGATCAGGCCATCCTTCTTCTTTCCAAAATGAA
TGAAGAGAACAGGGACCCAACCATCATCACTTACACGACTTTGATTGATGGATGTTGCAATTCTGGAAGGCCTGACGATGCCGAAATGCTTTGGAATGAAATGCAGCAAA
AAGGTTGCTCCCCAAACAGGATCGCTTATATGGCAATTGTACACGGCCTTTGCAAGTGTGGAAGGCCTGATGAAGCTTTAGTTTATTACCACAGGATGGAAGAAAAGGAA
ATGAAACCTGACAGTTATGTCTCTGTTGCATTGATTGATGCTTTCATATCAAAACACCACTTTTTCATGGCTCTTCACATATTGAAGGAGACAATAGAGAAAGGAAACAT
TCCTGATCAGTCTGACAAGAACTATGTAATCGTAAGAGATGCCATCTTTAAATTGTCTGAAGACGAACAAACTGGCTTGGGAGTTAAATCTCTTATTGAAAAGGGCAGCA
TTCCGACGATTAGTGTTTCATGTTTGAGGGGCCAAAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATAGTGGCAAGGCTTGTCCCTTCAATTGTTACCTATAATCTTCTTATTGATGGATGGTGCAAAAGTGGTGATATTGATCAGGCCATCCTTCTTCTTTCCAAAATGAA
TGAAGAGAACAGGGACCCAACCATCATCACTTACACGACTTTGATTGATGGATGTTGCAATTCTGGAAGGCCTGACGATGCCGAAATGCTTTGGAATGAAATGCAGCAAA
AAGGTTGCTCCCCAAACAGGATCGCTTATATGGCAATTGTACACGGCCTTTGCAAGTGTGGAAGGCCTGATGAAGCTTTAGTTTATTACCACAGGATGGAAGAAAAGGAA
ATGAAACCTGACAGTTATGTCTCTGTTGCATTGATTGATGCTTTCATATCAAAACACCACTTTTTCATGGCTCTTCACATATTGAAGGAGACAATAGAGAAAGGAAACAT
TCCTGATCAGTCTGACAAGAACTATGTAATCGTAAGAGATGCCATCTTTAAATTGTCTGAAGACGAACAAACTGGCTTGGGAGTTAAATCTCTTATTGAAAAGGGCAGCA
TTCCGACGATTAGTGTTTCATGTTTGAGGGGCCAAAGTTGA
Protein sequenceShow/hide protein sequence
MIVARLVPSIVTYNLLIDGWCKSGDIDQAILLLSKMNEENRDPTIITYTTLIDGCCNSGRPDDAEMLWNEMQQKGCSPNRIAYMAIVHGLCKCGRPDEALVYYHRMEEKE
MKPDSYVSVALIDAFISKHHFFMALHILKETIEKGNIPDQSDKNYVIVRDAIFKLSEDEQTGLGVKSLIEKGSIPTISVSCLRGQS