; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G11500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G11500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRas-related protein Rab-2A
Genome locationClcChr01:17777221..17781967
RNA-Seq ExpressionClc01G11500
SyntenyClc01G11500
Gene Ontology termsGO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process)
GO:0015031 - protein transport (biological process)
GO:0005794 - Golgi apparatus (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7019338.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-11191.63Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCC
        GIKVGYGGIPGPSGGRDGTTAQSGGCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCC

XP_004139512.1 ras-related protein RABB1c [Cucumis sativus]4.7e-11292.11Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGYGGIPGPSGGRDG TAQSGGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

XP_022142692.1 ras-related protein RABB1c [Momordica charantia]3.0e-11191.23Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

XP_022927533.1 ras-related protein RABB1c-like [Cucurbita moschata]3.9e-11191.63Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCC
        GIKVGYGGIPGPSGGRDGTTAQSGGCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCC

XP_038893942.1 ras-related protein RABB1c isoform X2 [Benincasa hispida]1.2e-11292.54Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGYGGIPGPSGGRDGTTAQSGGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

TrEMBL top hitse value%identityAlignment
A0A0A0LYF8 Uncharacterized protein2.3e-11292.11Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGYGGIPGPSGGRDG TAQSGGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

A0A1S3CLK8 ras-related protein RABB1c2.3e-11292.11Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGYGGIPGPSGGRDG TAQSGGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

A0A218XLU8 ras-related protein RABB1c1.9e-11191.23Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGYGGIPGPSGGRDG T+QSGGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

A0A6J1CNK8 ras-related protein RABB1c1.5e-11191.23Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGYGGIPGPSGGRDGT+AQ+GGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

A0A6J1EL97 ras-related protein RABB1c-like1.9e-11191.63Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID+KPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFI+TAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCC
        GIKVGYGGIPGPSGGRDGTTAQSGGCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCC

SwissProt top hitse value%identityAlignment
P36863 GTP-binding protein yptV47.5e-9780Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHAN NMTIMLIGNKCDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA  IYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYG-GIPGPSGGR--DGTTAQSGGCC
        GIKVGYG G  GP   +  +G   +S  CC
Subjt:  GIKVGYG-GIPGPSGGR--DGTTAQSGGCC

P49103 Ras-related protein Rab-2-A1.7e-10485.53Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIML+GNKCDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGY  +PG SGG  G+++Q GGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

P49104 Ras-related protein Rab-2-B1.5e-10585.53Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIML+GNKCDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA  IYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS
        GIKVGY  IPG SGG   +++Q GGCCS
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCCS

P92963 Ras-related protein RABB1c8.8e-11491.19Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCC
        GIKVGYGGIPGPSGGRDG+T+Q GGCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCC

Q38922 Ras-related protein RABB1b3.3e-10080.18Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSNE                 S 
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCC
        GIK+GYG   G +GGRDGT +Q GGCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCC

Arabidopsis top hitse value%identityAlignment
AT4G17160.1 RAB GTPase homolog B1A4.1e-9073.68Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITIDNKPIKLQIWDTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LE+ARQHA+ NMT MLIGNKCDL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQDGV D +NE                   
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQS-GGCC
              G  PGP GG+D +++Q   GCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQS-GGCC

AT4G17170.1 RAB GTPase homolog B1C6.3e-11591.19Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE                 SY
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCC
        GIKVGYGGIPGPSGGRDG+T+Q GGCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCC

AT4G35860.1 GTP-binding 22.3e-10180.18Show/hide
Query:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
        MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW
Subjt:  MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASW

Query:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY
        LEDARQHAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSNE                 S 
Subjt:  LEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSY

Query:  GIKVGYGGIPGPSGGRDGTTAQSGGCC
        GIK+GYG   G +GGRDGT +Q GGCC
Subjt:  GIKVGYGGIPGPSGGRDGTTAQSGGCC

AT4G35860.2 GTP-binding 22.0e-7375.69Show/hide
Query:  MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFM
        M+T+D +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNKCDLAH+RAVS EEG+QFAKEHGL+F+
Subjt:  MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFM

Query:  EASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC
        EASA+TAQNVEEAFI+TAA I + IQDGVFDVSNE                 S GIK+GYG   G +GGRDGT +Q GGCC
Subjt:  EASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTTAQSGGCC

AT5G60860.1 RAB GTPase homolog A1F1.2e-4951.4Show/hide
Query:  YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE
        Y YLFK ++IGD+GVGKS LL +FT   F      TIGVEF  R I +D+K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR  TF ++  WL+
Subjt:  YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLE

Query:  DARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE
        + R H +AN+ IM +GNK DL H RAVSTE+ + FA+     FME SA  + NVE AF +  + IY+ +     D+ ++
Subjt:  DARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTCCTTCTCCAGTTTACCGACAAGAGATTCCAGCCTGTTCATGACTT
GACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAATAAACCAATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGT
CCTACTATAGAGGAGCTGCTGGTGCATTGCTTGTCTACGACATCACAAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCA
AACATGACAATAATGCTGATTGGTAATAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATCTTTATGGA
GGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATTAAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTTTTTGATGTATCTAATGAGGGGGTTT
TGGTTCTACTTTTGACTGAGCTACCTGAAGTGGTGGCTTCACTGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGGGACGGTACTACA
GCTCAATCTGGGGGTTGTTGCAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATACGCCTACCTTTTCAAGTACATCATCATTGGTGATACTGGAGTTGGAAAATCATGTCTCCTTCTCCAGTTTACCGACAAGAGATTCCAGCCTGTTCATGACTT
GACTATTGGTGTAGAATTTGGTGCGAGGATGATCACCATCGACAATAAACCAATCAAGTTGCAAATTTGGGATACGGCTGGTCAAGAATCTTTCAGGTCTATTACGAGGT
CCTACTATAGAGGAGCTGCTGGTGCATTGCTTGTCTACGACATCACAAGGAGGGAGACTTTTAATCACTTGGCTAGCTGGCTTGAAGATGCAAGACAACATGCTAATGCA
AACATGACAATAATGCTGATTGGTAATAAGTGTGATCTTGCACACCGAAGGGCTGTCAGCACTGAGGAAGGGGAGCAGTTTGCAAAGGAGCATGGTTTAATCTTTATGGA
GGCCTCTGCTAAAACTGCTCAAAATGTTGAGGAGGCATTCATTAAAACTGCTGCAACCATATATAAGAAGATCCAGGATGGAGTTTTTGATGTATCTAATGAGGGGGTTT
TGGTTCTACTTTTGACTGAGCTACCTGAAGTGGTGGCTTCACTGTCATATGGGATAAAAGTTGGATATGGTGGAATCCCAGGGCCATCAGGAGGCAGGGACGGTACTACA
GCTCAATCTGGGGGTTGTTGCAGTTAA
Protein sequenceShow/hide protein sequence
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANA
NMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNEGVLVLLLTELPEVVASLSYGIKVGYGGIPGPSGGRDGTT
AQSGGCCS