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Clc01G11730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G11730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein GL2-INTERACTING REPRESSOR 2
Genome locationClcChr01:18602058..18602425
RNA-Seq ExpressionClc01G11730
SyntenyClc01G11730
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2028179.1 hypothetical protein ES319_D05G081300v1 [Gossypium barbadense]1.5e-0541.77Show/hide
Query:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
        N+   S   S  +S+   +D+TT          ++MVL+GC RCLMYVM S++D KCPKC  T LLD+F+ +N     N
Subjt:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
KAG6583700.1 hypothetical protein SDJN03_19632, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1978.79Show/hide
Query:  SNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKNVVDMPPDVAK
        S+S  EDATT  MVLLGCT+CLMYVMSSK DLKCPKCN TTLLDV NL NQAS+KN+VDM  DVAK
Subjt:  SNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKNVVDMPPDVAK
XP_004506211.1 uncharacterized protein LOC101502581 [Cicer arietinum]1.9e-0555.1Show/hide
Query:  TVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKNVV
        T AM+L+GCTRCLMYVM  ++D KCPKC  T LLD  N     S+K  +
Subjt:  TVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKNVV
XP_022888450.1 uncharacterized protein LOC111403986 [Olea europaea var. sylvestris]1.1e-0552.24Show/hide
Query:  SESISQDLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRK
        S  +S+D SL  SNS   +AT  +MVL+GC RCLMYVM ++ D KCPKC  T LLDV +  N ++ K
Subjt:  SESISQDLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRK
XP_039002217.1 uncharacterized protein LOC120128632 [Hibiscus syriacus]1.1e-0554.72Show/hide
Query:  DLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFN
        D++ A+  ++  DAT+  MVL+GC RCL+YVM S+ D KCPKCN T LLD  N
Subjt:  DLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFN
TrEMBL top hitse value%identityAlignment
A0A5D2CHE2 Uncharacterized protein7.0e-0641.77Show/hide
Query:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
        N+   S   S  +S+   +D+TT          ++MVL+GC RCLMYVM S++D KCPKC  T LLD+F+ +N     N
Subjt:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
A0A5D2KTB2 Uncharacterized protein7.0e-0641.77Show/hide
Query:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
        N+   S   S  +S+   +D+TT          ++MVL+GC RCLMYVM S++D KCPKC  T LLD+F+ +N     N
Subjt:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
A0A5D2UUA0 Uncharacterized protein7.0e-0641.77Show/hide
Query:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
        N+   S   S  +S+   +D+TT          ++MVL+GC RCLMYVM S++D KCPKC  T LLD+F+ +N     N
Subjt:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
A0A5J5REV4 Uncharacterized protein7.0e-0641.77Show/hide
Query:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
        N+   S   S  +S+   +D+TT          ++MVL+GC RCLMYVM S++D KCPKC  T LLD+F+ +N     N
Subjt:  NSESISQDLSLAISNSTIEDATT----------VAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKN
A0A6A3AD94 Uncharacterized protein5.4e-0654.72Show/hide
Query:  DLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFN
        D++ A+  ++  DAT+  MVL+GC RCL+YVM S+ D KCPKCN T LLD  N
Subjt:  DLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFN
SwissProt top hitse value%identityAlignment
Q9FNI1 Protein GL2-INTERACTING REPRESSOR 13.0e-0668.57Show/hide
Query:  TVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD
        T +MVL+GC RCLMYVM S+ D KCPKC  T LLD
Subjt:  TVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD
Q9SRN4 Protein GL2-INTERACTING REPRESSOR 21.2e-0549.21Show/hide
Query:  QSFNNLNSESISQDLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD
        +S N  N+ S S  +S   +    E+ T  +MVL+GC RCLMYVM S  D KCPKC  T LLD
Subjt:  QSFNNLNSESISQDLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD
Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein8.2e-0749.21Show/hide
Query:  QSFNNLNSESISQDLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD
        +S N  N+ S S  +S   +    E+ T  +MVL+GC RCLMYVM S  D KCPKC  T LLD
Subjt:  QSFNNLNSESISQDLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD
AT5G06270.1 unknown protein2.2e-0768.57Show/hide
Query:  TVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD
        T +MVL+GC RCLMYVM S+ D KCPKC  T LLD
Subjt:  TVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCAAAGTTTCAACAATCTAAATTCAGAATCAATATCGCAAGATCTGTCGTTAGCTATATCTAACTCGACAATTGAAGATGCCACGACGGTGGCCATGGTGCTACT
AGGATGCACTCGATGCCTCATGTACGTCATGTCGTCTAAGTTAGATCTCAAGTGTCCTAAATGTAACGGCACTACATTGCTTGATGTATTCAATTTGGTCAATCAAGCAT
CTCGAAAAAATGTTGTCGACATGCCGCCCGATGTTGCTAAATGA
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTATAGAAGAGTTCTAGATTATGGGTCAAAGTTTCAACAATCTAAATTCAGAATCAATATCGCAAGATCTGTCGTTAGCTATATCTAACTCGACAATTGAAGAT
GCCACGACGGTGGCCATGGTGCTACTAGGATGCACTCGATGCCTCATGTACGTCATGTCGTCTAAGTTAGATCTCAAGTGTCCTAAATGTAACGGCACTACATTGCTTGA
TGTATTCAATTTGGTCAATCAAGCATCTCGAAAAAATGTTGTCGACATGCCGCCCGATGTTGCTAAATGAGAAGGGGTTTATCGGCATGTCGGTTGTAGTTACCTTCACT
CAATCTTTTACTTTCATTTCTTAATTCTTGATTTATTT
Protein sequenceShow/hide protein sequence
MGQSFNNLNSESISQDLSLAISNSTIEDATTVAMVLLGCTRCLMYVMSSKLDLKCPKCNGTTLLDVFNLVNQASRKNVVDMPPDVAK