CuGenDBv2

Gene ID	Clc01G12080
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	protein transport protein sec24
Genome location	ClcChr01:20360636..20367184
RNA-Seq Expression	Clc01G12080
Synteny	Clc01G12080
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0006888 - endoplasmic reticulum to Golgi vesicle-mediated transport (biological process) GO:0007029 - endoplasmic reticulum organization (biological process) GO:0007030 - Golgi organization (biological process) GO:0008361 - regulation of cell size (biological process) GO:0010584 - pollen exine formation (biological process) GO:0032876 - negative regulation of DNA endoreduplication (biological process) GO:0048232 - male gamete generation (biological process) GO:0048658 - anther wall tapetum development (biological process) GO:0080119 - ER body organization (biological process) GO:0030127 - COPII vesicle coat (cellular component) GO:0070971 - endoplasmic reticulum exit site (cellular component) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR006900 - Sec23/Sec24, helical domain IPR036175 - Sec23/Sec24 helical domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6573625.1 hypothetical protein SDJN03_27512, partial [Cucurbita argyrosperma subsp. sororia]

1.9e-143

85.4

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Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RTE+SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLR HEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL SYSTPDIQAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDC LRTTINELKQERCITPRL+FIRGG+DDATAFENYLIEEQDVDGSGLTSVMGFV
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQ VLEYLK
Subjt:  SFLEDVKQSVLEYLK

KAG7012706.1 SEC23 [Cucurbita argyrosperma subsp. argyrosperma]

1.2e-145

83.74

Show/hide

Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIR-----------LQVILASLEQ
        RTE+SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                   ++ LR C   TS    +            L+VILASLEQ
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIR-----------LQVILASLEQ

Query:  GVREGRALLHDWLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL
        GVREGRALLHDWLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLR HEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL
Subjt:  GVREGRALLHDWLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL

Query:  TSYSTPDIQAYPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVD
         SYSTPDIQAYPRHSLSRAAL+TSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDC LRTTINELKQERCITPRL+FIRGG+DDATAFENYLIEEQDVD
Subjt:  TSYSTPDIQAYPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVD

Query:  GSGLTSVMGFVSFLEDVKQSVLEYLK
        GSGLTSVMGF+SFLEDVKQ VLEYLK
Subjt:  GSGLTSVMGFVSFLEDVKQSVLEYLK

XP_022967059.1 protein transport protein sec24 [Cucurbita maxima]

2.9e-144

85.71

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Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RTE+SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLR HEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL SYSTPDIQAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGG+DDATAFENYLIEEQDVDGSGLTSVMGF+
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQ VLEYLK
Subjt:  SFLEDVKQSVLEYLK

XP_023541882.1 protein transport protein sec24 [Cucurbita pepo subsp. pepo]

1.1e-143

85.71

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Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RTE+SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLR HEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL SYSTPDIQAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDC LRTTINELKQERCITPRLIFIRGG+DDATAFENYLIEEQDVDGSGLTSVMGFV
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQ VLEYLK
Subjt:  SFLEDVKQSVLEYLK

XP_038894285.1 protein transport protein sec24 [Benincasa hispida]

4.5e-145

86.35

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Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RTE+SLKRRLRIRTIQFGTAQNFNELYDSVEPE VLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADP LPFPPPQDCLLRTTINELKQ+RCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQSVLEYLK
Subjt:  SFLEDVKQSVLEYLK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVF2 Sec23_helical domain-containing protein

9.2e-144

85.4

Show/hide

Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RT +SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEG+HPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTAD TLPFPPPQDCLLR+TINELK++RCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQSVLEYLK
Subjt:  SFLEDVKQSVLEYLK

A0A1S3CEA2 protein transport protein SEC24

1.6e-143

85.08

Show/hide

Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RT +SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEG+HPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPD+QAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTAD TLPFPPPQDCLLR+TINELK++RCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQSVLEYLK
Subjt:  SFLEDVKQSVLEYLK

A0A5A7SY28 Protein transport protein SEC24

1.6e-143

85.08

Show/hide

Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RT +SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEG+HPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPD+QAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTAD TLPFPPPQDCLLR+TINELK++RCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQSVLEYLK
Subjt:  SFLEDVKQSVLEYLK

A0A6J1G158 protein transport protein sec24

3.5e-143

85.08

Show/hide

Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RTE+SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLR HEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL SYSTPDIQAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDC LRTTINELKQERCITPRL+FIRGG+DDATAFENYLIEEQDV+GSGLTSVMGFV
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQ VLEYLK
Subjt:  SFLEDVKQSVLEYLK

A0A6J1HVN4 protein transport protein sec24

1.4e-144

85.71

Show/hide

Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        RTE+SLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHK                                       VILASLEQGVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY
        WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLR HEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVL SYSTPDIQAY
Subjt:  WLVILTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAY

Query:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV
        PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGG+DDATAFENYLIEEQDVDGSGLTSVMGF+
Subjt:  PRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFV

Query:  SFLEDVKQSVLEYLK
        SFLEDVKQ VLEYLK
Subjt:  SFLEDVKQSVLEYLK

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT2G27460.1 sec23/sec24 transport family protein

1.8e-123

70.25

Show/hide

Query:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD
        R +++L+RRLRIRT+QFGTA N NE+YDSV+ EVVLSLLVHK                                       VILASLE GVREGRALLHD
Subjt:  RTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHD

Query:  WLVILTAQYNDAYKLVHYKNG-ASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQA
        WLVILTAQYNDA+ LV YKNG  S +S +D+ FSQCPQL+ LPRLVFALLRNPLLRFHEEG+HPDYRIYLQCLFS L+PSSLHC +YP L SYSTPD  A
Subjt:  WLVILTAQYNDAYKLVHYKNG-ASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQA

Query:  YPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGF
        YPRHSLSRAALITSGSPIFFLDA+TTLIVFYSSTADP++PFPPPQDCLLR TIN++KQER ITP+L+FIRGG+DDAT FENYLIEEQDVDG+G  S MGF
Subjt:  YPRHSLSRAALITSGSPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGF

Query:  VSFLEDVKQSVLEYLK
        VSFL+D+ Q V EY+K
Subjt:  VSFLEDVKQSVLEYLK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

mRNA sequence

Show/hide mRNA sequence

ATGATGGATTGTTTATACAGAACGGAATATTCCCTTAAACGAAGACTGAGGATACGAACTATACAGTTTGGCACTGCTCAAAATTTCAACGAGCTTTACGACAGTGTTGA
GCCTGAGGTGGTTCTCTCATTGCTCGTTCACAAGAATTTCAGCTGTATTAAGGTTACCATCAAGTTGTATGAGAATGTTGGTCTTCTTAGGACATTTACACTTCGACAAT
GCAGAATACAAACAAGCATCCAAAGGAGCATAAGACTCCAAGTTATATTAGCTTCTTTGGAGCAAGGTGTTCGAGAGGGCAGGGCTCTACTTCATGATTGGCTTGTAATT
CTTACTGCACAATACAATGATGCATATAAACTCGTTCACTACAAAAATGGAGCTTCAGGAACTTCGCTTGTTGATGTTGCTTTCTCTCAGTGTCCGCAACTTCAATCTCT
ACCTCGCTTGGTCTTTGCTTTACTTAGGAACCCTCTCCTTCGATTCCATGAGGAAGGTATTCATCCTGACTACCGGATCTACCTGCAATGCCTTTTCAGTGCACTTGAAC
CAAGTTCCCTACACTGTGCTGTGTATCCAGTGCTGACATCATATTCTACCCCGGACATTCAAGCTTATCCACGTCACTCATTGAGTCGTGCTGCACTGATTACTAGTGGC
AGTCCGATATTTTTCCTTGACGCATTCACAACTCTAATTGTGTTTTATTCTTCCACTGCAGACCCTACGCTTCCGTTTCCTCCACCTCAAGATTGTTTGTTAAGGACTAC
AATTAACGAACTAAAACAAGAGAGATGCATCACCCCTAGGCTCATATTTATCCGAGGAGGTCAGGATGATGCGACAGCTTTTGAAAACTATCTTATCGAGGAACAGGACG
TTGATGGAAGTGGCCTCACGAGCGTCATGGGTTTTGTTTCCTTCCTGGAAGATGTCAAGCAGAGTGTTTTGGAATATTTGAAATAGACTGCATTACTTGGAATTCTTTCG
TGGTGTGGAAACTAAAAAGCAACAATGCATTCTGAAAACGTCCTGATATTGAACTACTCTCGAGTCTGATGAATGAGGAGTCCGGATCAGCAATAGAGGGATATCCTTAT
ATGAATGTTTGCAGCAAATTTTGAGGTGGACCCTTCACAAGAATCACTTTCAGGTGCTTACTACTTGTTGCTACATCTTTATGAAAGCAATTCACAGGTCTTGCCAATAT
TTTTCTTGTTTGAACATAATAAATATAGCTATTAGACTTGTTAGAATTGTTTTCCTTGGATAATTTTTCAGCATTGTATTGGAAAGTTAAACCAAACACACCCTAATTGA
TTGGAAACATAACTAGTTTTTCTTCTCTCTTTTTTATTTTTTATTTTTATAGATAATTTGGCTGGATAATTTTATTCTGGTGGAATAATTGCTGAGAGGATTTGCTTGTA
GATGTTGAGTTGTTTGAACCTAACAAATACAGGGTCCTTTTTCCA

Protein sequence

Show/hide protein sequence

MMDCLYRTEYSLKRRLRIRTIQFGTAQNFNELYDSVEPEVVLSLLVHKNFSCIKVTIKLYENVGLLRTFTLRQCRIQTSIQRSIRLQVILASLEQGVREGRALLHDWLVI
LTAQYNDAYKLVHYKNGASGTSLVDVAFSQCPQLQSLPRLVFALLRNPLLRFHEEGIHPDYRIYLQCLFSALEPSSLHCAVYPVLTSYSTPDIQAYPRHSLSRAALITSG
SPIFFLDAFTTLIVFYSSTADPTLPFPPPQDCLLRTTINELKQERCITPRLIFIRGGQDDATAFENYLIEEQDVDGSGLTSVMGFVSFLEDVKQSVLEYLK

Clc01G12080 (gene) of Watermelon (cordophanus) v2 genome