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Clc01G12135 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G12135
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransposase-like protein
Genome locationClcChr01:20758395..20759050
RNA-Seq ExpressionClc01G12135
SyntenyClc01G12135
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038004.1 transposase-like protein [Cucumis melo var. makuwa]2.4e-2971.28Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK
        +PP PL  E I  +L    F C K+HCLDVMHIEKNV +N+IGTLL+IP KSKDG++ RLDLVEMNIRPELAPVS GSR YIPA CYTLSR+EK
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK

KAA0039057.1 hypothetical protein E6C27_scaffold84G001530 [Cucumis melo var. makuwa]7.0e-2955.56Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PP+PL  EAI  KL +MIFSC  K                               HCLDVMHIEKNVC+N++GTLL+IP KS+DG+NNRLDLVE+NIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKF
        ELAP+  G+R YIPATCYTLSR+EK+
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKF

KAA0051767.1 transposase [Cucumis melo var. makuwa]1.2e-2854.33Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PPEPL  EAI  KL +MIFS  KK                               HCLD+MHIEKNVC+N++GTLL++P+KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFQ
        ELAP+ +G+R YIPA CYTLSR+EK++
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFQ

KAA0062841.1 transposase [Cucumis melo var. makuwa]2.4e-2955.91Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PP+PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLLNIP KSKD +N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFQ
        +LAP+ +G+R YIPATCYTLSR+EK++
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFQ

TYK11977.1 transposase [Cucumis melo var. makuwa]4.1e-2955.91Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PP PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLL+IP KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFQ
        ELAP+ +G+R YIPA CYTLSR+EK++
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFQ

TrEMBL top hitse value%identityAlignment
A0A5A7T3F8 Transposase-like protein1.2e-2971.28Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK
        +PP PL  E I  +L    F C K+HCLDVMHIEKNV +N+IGTLL+IP KSKDG++ RLDLVEMNIRPELAPVS GSR YIPA CYTLSR+EK
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEK

A0A5A7TBU6 Uncharacterized protein3.4e-2955.56Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PP+PL  EAI  KL +MIFSC  K                               HCLDVMHIEKNVC+N++GTLL+IP KS+DG+NNRLDLVE+NIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKF
        ELAP+  G+R YIPATCYTLSR+EK+
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKF

A0A5A7UBI8 Transposase5.8e-2954.33Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PPEPL  EAI  KL +MIFS  KK                               HCLD+MHIEKNVC+N++GTLL++P+KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFQ
        ELAP+ +G+R YIPA CYTLSR+EK++
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFQ

A0A5A7VAX7 Transposase1.2e-2955.91Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PP+PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLLNIP KSKD +N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFQ
        +LAP+ +G+R YIPATCYTLSR+EK++
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFQ

A0A5D3CJ44 Transposase2.0e-2955.91Show/hide
Query:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP
        +PP PL  EAI  KL +MIFSC KK                               HCLDVMHIEKNVC+N++GTLL+IP KSKDG+N+RLDLVEMNIRP
Subjt:  SPPEPLLEEAICMKLNKMIFSCEKK-------------------------------HCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRP

Query:  ELAPVSSGSRMYIPATCYTLSRKEKFQ
        ELAP+ +G+R YIPA CYTLSR+EK++
Subjt:  ELAPVSSGSRMYIPATCYTLSRKEKFQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGACTTGTTAAATGATGTTTCCAATAGGTTAGACAGTCCTCCAGAACCTTTGTTAGAAGAGGCCATTTGCATGAAACTCAACAAAATGATATTTTCATGTGAGAA
GAAACATTGTCTTGATGTCATGCATATTGAAAAGAATGTGTGCATAAATGTAATAGGAACATTGCTTAATATACCTGAAAAAAGTAAAGATGGGATCAATAATAGACTTG
ATCTAGTTGAAATGAACATTCGACCTGAACTAGCACCCGTGTCTAGTGGGAGTAGAATGTACATACCCGCAACATGTTATACGTTGTCAAGAAAAGAGAAGTTCCAGAAC
GGTATTCATTGGAGTTCTCCAGTAGCTTTACGATGTTTGCTTCGAGAATTAGAGTATATTGGATCAACAATCCAACTTTCTGTACTCGTTGAGGTGTTCGGGATTCAATG
A
mRNA sequenceShow/hide mRNA sequence
ATGGGCGACTTGTTAAATGATGTTTCCAATAGGTTAGACAGTCCTCCAGAACCTTTGTTAGAAGAGGCCATTTGCATGAAACTCAACAAAATGATATTTTCATGTGAGAA
GAAACATTGTCTTGATGTCATGCATATTGAAAAGAATGTGTGCATAAATGTAATAGGAACATTGCTTAATATACCTGAAAAAAGTAAAGATGGGATCAATAATAGACTTG
ATCTAGTTGAAATGAACATTCGACCTGAACTAGCACCCGTGTCTAGTGGGAGTAGAATGTACATACCCGCAACATGTTATACGTTGTCAAGAAAAGAGAAGTTCCAGAAC
GGTATTCATTGGAGTTCTCCAGTAGCTTTACGATGTTTGCTTCGAGAATTAGAGTATATTGGATCAACAATCCAACTTTCTGTACTCGTTGAGGTGTTCGGGATTCAATG
A
Protein sequenceShow/hide protein sequence
MGDLLNDVSNRLDSPPEPLLEEAICMKLNKMIFSCEKKHCLDVMHIEKNVCINVIGTLLNIPEKSKDGINNRLDLVEMNIRPELAPVSSGSRMYIPATCYTLSRKEKFQN
GIHWSSPVALRCLLRELEYIGSTIQLSVLVEVFGIQ