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Clc01G12340 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G12340
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionDUF4283 domain-containing protein
Genome locationClcChr01:21663814..21665130
RNA-Seq ExpressionClc01G12340
SyntenyClc01G12340
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050510.1 hypothetical protein E6C27_scaffold175G001530 [Cucumis melo var. makuwa]3.9e-0839.55Show/hide
Query:  LDMAIYGDEPDETHNLPLYTFPPLPSDISPQDHILGPTP-----SQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLCAIPSIPQQSKSKGP
        LD+AI+G++P E H L L   PP+P D++   H   PTP     SQ +  P+ P+ S   Q  P             SLL    +  +  +    K+K  
Subjt:  LDMAIYGDEPDETHNLPLYTFPPLPSDISPQDHILGPTP-----SQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLCAIPSIPQQSKSKGP

Query:  AHAKSKKSKLQRELQGLYSSIHYDKTATLAIREG
        A   SK++KLQRELQ L+ SI+YDK+ATLAI EG
Subjt:  AHAKSKKSKLQRELQGLYSSIHYDKTATLAIREG

KAE8648340.1 hypothetical protein Csa_023105, partial [Cucumis sativus]6.8e-0559.52Show/hide
Query:  TTSYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER
        T SYGGWID++ LP  L  E I KFIG+ CGGY+  +NQT R
Subjt:  TTSYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER

TYK05133.1 hypothetical protein E5676_scaffold1769G00370 [Cucumis melo var. makuwa]5.2e-1342.66Show/hide
Query:  EFTPCPLDMAIYGDEPDETHNLPLYTFPPLPSDI-SPQDHILGPTPSQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLC--AIPSIPQQSK
        +F    L+ A++G+ P E+ +LP+   PP+P+D  SP  H   P PS+  +    PS          S+  P S  D+AS+L  HGLC  AIPS+P   K
Subjt:  EFTPCPLDMAIYGDEPDETHNLPLYTFPPLPSDI-SPQDHILGPTPSQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLC--AIPSIPQQSK

Query:  SKGPAHAKSKKSKLQRELQGLYSSIHYDKTATLAIREGTSVAQ
         K P  A ++++KLQRELQ L SSI YDK+  LA REG +VA+
Subjt:  SKGPAHAKSKKSKLQRELQGLYSSIHYDKTATLAIREGTSVAQ

TYK14201.1 hypothetical protein E5676_scaffold5G00230 [Cucumis melo var. makuwa]1.5e-0457.5Show/hide
Query:  SYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER
        S+GGWID++ LP  LW E I +FIG+ CGG++  SNQT+R
Subjt:  SYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER

TrEMBL top hitse value%identityAlignment
A0A0A0KND3 DUF4283 domain-containing protein8.7e-0654.76Show/hide
Query:  TTSYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER
        T S+GGWID++ LP+ L  E IF+FIG+ CGG++  SN+T+R
Subjt:  TTSYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER

A0A0A0KPT1 Uncharacterized protein3.3e-0559.52Show/hide
Query:  TTSYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER
        T SYGGWID++ LP  L  E I KFIG+ CGGY+  +NQT R
Subjt:  TTSYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTER

A0A0A0LHM7 Uncharacterized protein3.3e-0548.61Show/hide
Query:  PFSPHDLASLLSTHGLC--AIPSIPQQSKSKGPAHAKSKKSKLQRELQGLYSSIHYDKTATLAIREGTSVAQ
        P S  D+A +L  HGLC  A+PS+P + K+K P    +K++KLQR+LQ L SSI YDKT++L  R+G+   Q
Subjt:  PFSPHDLASLLSTHGLC--AIPSIPQQSKSKGPAHAKSKKSKLQRELQGLYSSIHYDKTATLAIREGTSVAQ

A0A5A7U5M3 Uncharacterized protein1.9e-0839.55Show/hide
Query:  LDMAIYGDEPDETHNLPLYTFPPLPSDISPQDHILGPTP-----SQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLCAIPSIPQQSKSKGP
        LD+AI+G++P E H L L   PP+P D++   H   PTP     SQ +  P+ P+ S   Q  P             SLL    +  +  +    K+K  
Subjt:  LDMAIYGDEPDETHNLPLYTFPPLPSDISPQDHILGPTP-----SQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLCAIPSIPQQSKSKGP

Query:  AHAKSKKSKLQRELQGLYSSIHYDKTATLAIREG
        A   SK++KLQRELQ L+ SI+YDK+ATLAI EG
Subjt:  AHAKSKKSKLQRELQGLYSSIHYDKTATLAIREG

A0A5D3BZG4 Uncharacterized protein2.5e-1342.66Show/hide
Query:  EFTPCPLDMAIYGDEPDETHNLPLYTFPPLPSDI-SPQDHILGPTPSQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLC--AIPSIPQQSK
        +F    L+ A++G+ P E+ +LP+   PP+P+D  SP  H   P PS+  +    PS          S+  P S  D+AS+L  HGLC  AIPS+P   K
Subjt:  EFTPCPLDMAIYGDEPDETHNLPLYTFPPLPSDI-SPQDHILGPTPSQNMTAPYSPSFSNYEQSAPISSNLPFSPHDLASLLSTHGLC--AIPSIPQQSK

Query:  SKGPAHAKSKKSKLQRELQGLYSSIHYDKTATLAIREGTSVAQ
         K P  A ++++KLQRELQ L SSI YDK+  LA REG +VA+
Subjt:  SKGPAHAKSKKSKLQRELQGLYSSIHYDKTATLAIREGTSVAQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTACATCATATGGGGGTTGGATTGATCTTTACCACCTTCCAGTCACCCTCTGGACTGAAGCCATATTCAAATTTATCGGAGATTTTTGTGGAGGCTACCTTCATCC
CTCTAATCAGACTGAAAGAGAATTTACCCCCTGCCCTCTTGACATGGCCATTTATGGTGATGAACCGGATGAAACTCATAACTTACCACTATACACTTTTCCTCCTCTCC
CATCGGACATTAGTCCTCAAGATCATATTTTGGGGCCCACTCCATCACAAAATATGACAGCTCCTTACAGCCCCTCTTTTTCGAATTATGAACAATCGGCCCCAATCTCA
TCAAACTTACCATTCAGCCCCCATGACCTTGCCTCCCTACTGTCTACCCATGGCTTATGTGCCATCCCCTCCATTCCTCAACAATCCAAATCCAAAGGTCCAGCGCATGC
TAAAAGCAAAAAATCTAAGCTACAAAGAGAGTTGCAAGGCCTTTATTCCTCGATACACTATGATAAGACAGCAACATTGGCCATTAGGGAGGGAACTTCTGTAGCTCAAT
GA
mRNA sequenceShow/hide mRNA sequence
ATGACTACATCATATGGGGGTTGGATTGATCTTTACCACCTTCCAGTCACCCTCTGGACTGAAGCCATATTCAAATTTATCGGAGATTTTTGTGGAGGCTACCTTCATCC
CTCTAATCAGACTGAAAGAGAATTTACCCCCTGCCCTCTTGACATGGCCATTTATGGTGATGAACCGGATGAAACTCATAACTTACCACTATACACTTTTCCTCCTCTCC
CATCGGACATTAGTCCTCAAGATCATATTTTGGGGCCCACTCCATCACAAAATATGACAGCTCCTTACAGCCCCTCTTTTTCGAATTATGAACAATCGGCCCCAATCTCA
TCAAACTTACCATTCAGCCCCCATGACCTTGCCTCCCTACTGTCTACCCATGGCTTATGTGCCATCCCCTCCATTCCTCAACAATCCAAATCCAAAGGTCCAGCGCATGC
TAAAAGCAAAAAATCTAAGCTACAAAGAGAGTTGCAAGGCCTTTATTCCTCGATACACTATGATAAGACAGCAACATTGGCCATTAGGGAGGGAACTTCTGTAGCTCAAT
GA
Protein sequenceShow/hide protein sequence
MTTSYGGWIDLYHLPVTLWTEAIFKFIGDFCGGYLHPSNQTEREFTPCPLDMAIYGDEPDETHNLPLYTFPPLPSDISPQDHILGPTPSQNMTAPYSPSFSNYEQSAPIS
SNLPFSPHDLASLLSTHGLCAIPSIPQQSKSKGPAHAKSKKSKLQRELQGLYSSIHYDKTATLAIREGTSVAQ