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Clc01G12350 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G12350
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionalpha/beta-Hydrolases superfamily protein
Genome locationClcChr01:21665278..21668483
RNA-Seq ExpressionClc01G12350
SyntenyClc01G12350
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsIPR029058 - Alpha/Beta hydrolase fold


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583654.1 hypothetical protein SDJN03_19586, partial [Cucurbita argyrosperma subsp. sororia]2.2e-3994.19Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MI PIGVAFAVGLLGWVYQALKPSPPKICGS NGPPVTSPRVKLNDGRHLAY+EFGVPKEEAQ KIIMCHGYNSSKDMYLPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

XP_022142538.1 uncharacterized protein LOC111012628 [Momordica charantia]1.2e-4097.62Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQ
        MITPIGVAFAVGLLGWVYQALKPSPPKICGS NGPPVTSPRVKLNDGRHLAY+EFGVPKEEAQYKIIMCHGYNSSKDMYLPASQ
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQ

XP_022932198.1 uncharacterized protein LOC111438516 [Cucurbita moschata]1.9e-3893.02Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MI PIGVAFAVGLLGWVYQALKPSPPKICGS NGPPVTS RVKLNDGRHLAY+EFGVPKEEAQ KIIMCHGYNSSKDMYLPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

XP_023519848.1 uncharacterized protein LOC111783178 [Cucurbita pepo subsp. pepo]3.2e-3891.86Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MI PIGVAFAVG+LGWVYQALKPSPPKICGS NGPPVTSPRVKLNDGRHLAY+EFGV KEEAQ KIIMCHGYNSSKDMYLPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

XP_038894681.1 uncharacterized protein LOC120083152 [Benincasa hispida]2.2e-3993.02Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MITPI VAFAV LLGWVYQALKPSPPKICGSENGPPVTSPR+KLNDGRHLAY+EFGVPKEEAQYKIIMCHGYNSSKDM+LPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

TrEMBL top hitse value%identityAlignment
A0A1S3CER2 uncharacterized protein LOC1035001192.7e-3890.7Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MITPIGVAFAVGLLGWVY++LKPSP KICGSENGPPVTSPRV LNDGRHLAY+ FGVPKEEAQYKIIMCHG+NSSKDMYLPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

A0A6J1CL81 uncharacterized protein LOC1110126285.7e-4197.62Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQ
        MITPIGVAFAVGLLGWVYQALKPSPPKICGS NGPPVTSPRVKLNDGRHLAY+EFGVPKEEAQYKIIMCHGYNSSKDMYLPASQ
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQ

A0A6J1EWC7 uncharacterized protein LOC1114385169.1e-3993.02Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MI PIGVAFAVGLLGWVYQALKPSPPKICGS NGPPVTS RVKLNDGRHLAY+EFGVPKEEAQ KIIMCHGYNSSKDMYLPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

A0A6J1HYS2 uncharacterized protein LOC111469316 isoform X21.6e-3893.02Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MI PIGVAFAVGLLGWVYQALKPSPPKICGS NGPPVTSPRVKLNDGRHLAY+EFGVPKEEAQ KIIM HGYNSSKDMYLPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

A0A6J1I094 uncharacterized protein LOC111469316 isoform X11.6e-3893.02Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF
        MI PIGVAFAVGLLGWVYQALKPSPPKICGS NGPPVTSPRVKLNDGRHLAY+EFGVPKEEAQ KIIM HGYNSSKDMYLPASQ F
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74280.1 alpha/beta-Hydrolases superfamily protein4.4e-1755.71Show/hide
Query:  PIGVAFAVGLL-GWVYQA-LKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHG
        P  V   VG++  + YQ+ LKP PPK+CGS  GPP+T+PR+KL DGR+LAYKE G+P+E+A  KI+  HG
Subjt:  PIGVAFAVGLL-GWVYQA-LKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHG

AT1G74300.1 alpha/beta-Hydrolases superfamily protein4.7e-1954.55Show/hide
Query:  ITPIGVAFAVG-LLGWVYQA-LKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSK
        I P  V   VG +L   YQ+ LKP PP +CGS  GPP+T+PR+KL DGRHLAYKE+G+P+E+A++KI+  HG +S +
Subjt:  ITPIGVAFAVG-LLGWVYQA-LKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSK

AT3G48410.1 alpha/beta-Hydrolases superfamily protein1.1e-2064.06Show/hide
Query:  VGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNS
        VG+L WVYQ ++P P KI GS  GP VTSPR+KL DGRHLAY EFG+P++EA++KII  HG++S
Subjt:  VGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNS

AT5G22460.1 alpha/beta-Hydrolases superfamily protein4.8e-2458.02Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLP
        M+  + VA  V L+G++Y++ KP PP+ICG  NGPPVTSPR+KL+DGR+LAY+E GV ++ A YKII+ HG+NSSKD   P
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLP

AT5G22460.2 alpha/beta-Hydrolases superfamily protein4.8e-2458.02Show/hide
Query:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLP
        M+  + VA  V L+G++Y++ KP PP+ICG  NGPPVTSPR+KL+DGR+LAY+E GV ++ A YKII+ HG+NSSKD   P
Subjt:  MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTACACCAATAGGAGTAGCATTTGCAGTGGGTCTTCTGGGATGGGTTTATCAAGCACTGAAACCTTCACCTCCAAAGATATGTGGATCAGAAAATGGCCCTCCAGT
GACTTCACCTAGAGTAAAGCTCAATGATGGGAGACATTTGGCCTACAAAGAATTTGGAGTTCCTAAGGAAGAGGCTCAATACAAAATCATTATGTGTCATGGCTACAATA
GCTCCAAAGATATGTACTTACCTGCCTCTCAATTCTTTAGAAAATTGAATGAGGAAGGAGATACCCTTTGGCTTGAGAAGTACAACAACAAGCATGGTTATTTTGCGGAA
CTCACGTTATTGGAACAATTTGGTCTCCGATCAAACATCCTCATCCCAGCAATGGAGGACAAAAGGGGTTGGTTCTCCTTCTTCTCACTGATATCCGACTATTCCAACAA
GAACTTGCAATCCAATAAGACTATTTCATACAGTGAAGCAGTAAAATTGAAAAGTCCTCCACAAATTCAGCAACAACAAACTGCCCCTCCTCGGCAGCATTGTGCTATTC
CAATCCCCTACAGTGATTGGTTGGCTATGGTGATTGTTCACGACAAAAGACACTTGGTTGAAGATACGTTCAACTCTTCAAGCAACCATCTCACCTAG
mRNA sequenceShow/hide mRNA sequence
TGATTCATTTTCTTGAAGATTGAATTTGGCCATACACGTGGATATGGTTTTATCTTTTAAAAGAAATATCGTTAAACGTCGATTGGACTGCAAGAATCATCGTCTCAGGA
GTAAGACCATGTTTAAATTATGCAAAATCATGTCAACCGTCGATCTCACTCTACTCGGGGCTTTTCCTCTTGATTTTCCCGCTGATTAAGTGTGTTTCTTCCACTCCGTA
GCGTTTTACGTTGCCCTGGCAGTGAAGGGCTATCTGCTACACTCGGAGGCGGATGTTCAGGCAGTGATTGAAAACCTTGAGCTAAAACCAATTAGATAAAGCAACGAGGG
ATACGTTGCGTAAAGTTGGTGGAATTCCTGTTCCACGTGGTTCAGAGATTACATCATCAGTCCATTTATACTAAGCTTATCTGTACCTCTTGAATTCACTGTATACTACT
TAGCAAGCATATTATAGTGCAATCGTTCTGTTCAAGAAGAGAGATATCTCTTTTTTCTCTTAGGCAATGATTACACCAATAGGAGTAGCATTTGCAGTGGGTCTTCTGGG
ATGGGTTTATCAAGCACTGAAACCTTCACCTCCAAAGATATGTGGATCAGAAAATGGCCCTCCAGTGACTTCACCTAGAGTAAAGCTCAATGATGGGAGACATTTGGCCT
ACAAAGAATTTGGAGTTCCTAAGGAAGAGGCTCAATACAAAATCATTATGTGTCATGGCTACAATAGCTCCAAAGATATGTACTTACCTGCCTCTCAATTCTTTAGAAAA
TTGAATGAGGAAGGAGATACCCTTTGGCTTGAGAAGTACAACAACAAGCATGGTTATTTTGCGGAACTCACGTTATTGGAACAATTTGGTCTCCGATCAAACATCCTCAT
CCCAGCAATGGAGGACAAAAGGGGTTGGTTCTCCTTCTTCTCACTGATATCCGACTATTCCAACAAGAACTTGCAATCCAATAAGACTATTTCATACAGTGAAGCAGTAA
AATTGAAAAGTCCTCCACAAATTCAGCAACAACAAACTGCCCCTCCTCGGCAGCATTGTGCTATTCCAATCCCCTACAGTGATTGGTTGGCTATGGTGATTGTTCACGAC
AAAAGACACTTGGTTGAAGATACGTTCAACTCTTCAAGCAACCATCTCACCTAG
Protein sequenceShow/hide protein sequence
MITPIGVAFAVGLLGWVYQALKPSPPKICGSENGPPVTSPRVKLNDGRHLAYKEFGVPKEEAQYKIIMCHGYNSSKDMYLPASQFFRKLNEEGDTLWLEKYNNKHGYFAE
LTLLEQFGLRSNILIPAMEDKRGWFSFFSLISDYSNKNLQSNKTISYSEAVKLKSPPQIQQQQTAPPRQHCAIPIPYSDWLAMVIVHDKRHLVEDTFNSSSNHLT