; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G12540 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G12540
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionStress-response A/B barrel domain-containing protein
Genome locationClcChr01:23472211..23473498
RNA-Seq ExpressionClc01G12540
SyntenyClc01G12540
Gene Ontology termsNA
InterPro domainsIPR011008 - Dimeric alpha-beta barrel
IPR013097 - Stress responsive alpha-beta barrel
IPR044662 - Stress-response A/B barrel domain-containing protein HS1/DABB1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040939.1 stress-response A/B barrel domain-containing protein [Cucumis melo var. makuwa]5.8e-5267.51Show/hide
Query:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFS
        +TTM EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFS
Subjt:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFS

Query:  MTFDDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        MTFDDKEAI SFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS   PP PP  E TPE ALPPVLTST L    PTPA A  PTPASASA
Subjt:  MTFDDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

XP_004139472.2 stress-response A/B barrel domain-containing protein At5g22580 [Cucumis sativus]7.1e-5062.86Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEG+NVDEIV QVEKMVSDIDSVKSFEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPP----------------PPPPVEMTPEVALPPVLTSTPLPPPVPTPAPA
        DDKEAI SFLTHPKHLEFCPTFSAAIDKIVVLDFPS+LVK   PPPS  PPP                PPP +E TPE ALPPVLTSTPL    PTPA A
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPP----------------PPPPVEMTPEVALPPVLTSTPLPPPVPTPAPA

Query:  PVPTPASASA
           TPASASA
Subjt:  PVPTPASASA

XP_008461858.1 PREDICTED: stress-response A/B barrel domain-containing protein At5g22580-like [Cucumis melo]1.1e-5067.53Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        DDKEAI SFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS   PP PP  E TPE ALPPVLTST L    PTPA A  PTPASASA
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

XP_022142413.1 stress-response A/B barrel domain-containing protein At5g22580-like [Momordica charantia]1.5e-4764.1Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLV+ KFKEGVNV+EIVEQVEK+VSDIDSVKSFEW                                      GH+ EGQ+MLTQGFTHV SMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEM-TPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        DDKE I SFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVK P PPPSLPPPP PP     +PE   PP LTSTPLPPPVPT A AP    A A A
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEM-TPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

XP_038893880.1 stress-response A/B barrel domain-containing protein At5g22580-like [Benincasa hispida]5.1e-5671.13Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        MAEFKHLVVVKFKEGVNVDEIVEQVEKMVS IDSVKSFEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        DDKEAI SFLTHPKH+EFCPTFSAAIDKIVVLDFPSLLVK PAPPPS PP PPPP VE  PE A PPVLTSTPL    PTPA AP PTPASASA
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

TrEMBL top hitse value%identityAlignment
A0A0A0LY53 Stress-response A/B barrel domain-containing protein4.1e-5167.01Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEG+NVDEIV QVEKMVSDIDSVKSFEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        DDKEAI SFLTHPKHLEFCPTFSAAIDKIVVLDFPS+LVK   PPPS   P PPP +E TPE ALPPVLTSTPL    PTPA A   TPASASA
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

A0A1S3CFK4 stress-response A/B barrel domain-containing protein At5g22580-like5.3e-5167.53Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        DDKEAI SFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS   PP PP  E TPE ALPPVLTST L    PTPA A  PTPASASA
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

A0A5A7TI03 Stress-response A/B barrel domain-containing protein2.8e-5267.51Show/hide
Query:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFS
        +TTM EFKHLVV KFKEGVNVDEIVEQVEKMVSDIDSVK FEW                                      GHD+EGQDMLTQGFTHVFS
Subjt:  KTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFS

Query:  MTFDDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        MTFDDKEAI SFLTHPKHLEFCPTFSAAID+IVVLDFPS+LVK  APPPS   PP PP  E TPE ALPPVLTST L    PTPA A  PTPASASA
Subjt:  MTFDDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

A0A6J1CN73 stress-response A/B barrel domain-containing protein At5g22580-like7.2e-4864.1Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        M EFKHLV+ KFKEGVNV+EIVEQVEK+VSDIDSVKSFEW                                      GH+ EGQ+MLTQGFTHV SMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEM-TPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA
        DDKE I SFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVK P PPPSLPPPP PP     +PE   PP LTSTPLPPPVPT A AP    A A A
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEM-TPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA

A0A6J1I2Y7 stress-response A/B barrel domain-containing protein At5g22580-like2.1e-4762.44Show/hide
Query:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF
        MAEFKHLV+ KFKE VNV+EIVEQVEKMVSDID VKSFEW                                      GHD+EGQDM+TQGFTHVFSMTF
Subjt:  MAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTF

Query:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVP---TPAPAPVPTPASASA
        DDKEAIASFLTHPKHLEFCPTFSAAIDKI+VLDFPSLLVK    PP+LPPP        +PE   P V+ STPLPPP P    PAP P PTPASA A
Subjt:  DDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVEMTPEVALPPVLTSTPLPPPVP---TPAPAPVPTPASASA

SwissProt top hitse value%identityAlignment
Q9FK81 Stress-response A/B barrel domain-containing protein At5g225805.4e-2444.93Show/hide
Query:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK
        FKHLVVVKFKE   VDEI++ +E +VS ID+VKSFEW                                      G D E  DML QGFTH FSMTF++K
Subjt:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK

Query:  EAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT
        +   +F +HP H+EF   F+A IDKIV+LDFP   VK+
Subjt:  EAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT

Q9LUV2 Stress-response A/B barrel domain-containing protein HS12.6e-1027.07Show/hide
Query:  KHLVVVKFKEGVN---VDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFD
        KH+++  FK+GV+   ++E+++    +V+ I+ +K+F W                                      G D+  ++ L QG+TH+F  TF+
Subjt:  KHLVVVKFKEGVN---VDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFD

Query:  DKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDF
         KEA+A ++ HP H+EF   F  ++DK++V+D+
Subjt:  DKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDF

Arabidopsis top hitse value%identityAlignment
AT3G17210.1 heat stable protein 11.8e-1127.07Show/hide
Query:  KHLVVVKFKEGVN---VDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFD
        KH+++  FK+GV+   ++E+++    +V+ I+ +K+F W                                      G D+  ++ L QG+TH+F  TF+
Subjt:  KHLVVVKFKEGVN---VDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFD

Query:  DKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDF
         KEA+A ++ HP H+EF   F  ++DK++V+D+
Subjt:  DKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDF

AT5G22580.1 Stress responsive A/B Barrel Domain3.8e-2544.93Show/hide
Query:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK
        FKHLVVVKFKE   VDEI++ +E +VS ID+VKSFEW                                      G D E  DML QGFTH FSMTF++K
Subjt:  FKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPLMHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDK

Query:  EAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT
        +   +F +HP H+EF   F+A IDKIV+LDFP   VK+
Subjt:  EAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGCAGTCAACATGGAAACAAAGCCAAGCATTACTGCATCAGCCATAGCCATAGCCATAGCCAATTTTAGGCGATTGATTGCTACAATTAGAAAAGCCAAC
CTGGGAAATGGAACGTGGGGTGTGTCAGCGGACAGAGGGGGAAAAACCACCATGGCCGAGTTCAAGCACCTTGTTGTTGTCAAGTTTAAGGAGGGTGTGAATGTG
GATGAAATTGTGGAGCAAGTGGAGAAGATGGTTTCTGATATTGACTCTGTCAAGTCCTTTGAGTGGTATTTCTCCCGTTTTAAGTCCCCTTTCTCACCCCCACTC
ATGCATACTATCCCTCAAGTGTTGTTGGAACTTGAAATGGGTAATGCAAGTATACTACTGCTTGGCTTGGACAGGGGACATGATATGGAAGGCCAAGACATGCTG
ACACAAGGCTTCACGCACGTCTTCTCAATGACGTTTGATGACAAAGAAGCCATCGCTTCATTTCTTACCCATCCTAAGCATCTTGAATTCTGTCCCACTTTCAGT
GCAGCCATTGACAAGATTGTAGTCCTTGATTTCCCATCACTTCTTGTCAAGACACCTGCACCACCTCCATCACTGCCACCGCCACCGCCGCCACCACCAGTGGAA
ATGACACCGGAAGTTGCTTTGCCACCAGTGCTGACATCCACACCTCTACCACCACCAGTACCAACACCTGCCCCTGCCCCTGTCCCAACACCGGCATCTGCTTCA
GCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGATGCAGTCAACATGGAAACAAAGCCAAGCATTACTGCATCAGCCATAGCCATAGCCATAGCCAATTTTAGGCGATTGATTGCTACAATTAGAAAAGCCAAC
CTGGGAAATGGAACGTGGGGTGTGTCAGCGGACAGAGGGGGAAAAACCACCATGGCCGAGTTCAAGCACCTTGTTGTTGTCAAGTTTAAGGAGGGTGTGAATGTG
GATGAAATTGTGGAGCAAGTGGAGAAGATGGTTTCTGATATTGACTCTGTCAAGTCCTTTGAGTGGTATTTCTCCCGTTTTAAGTCCCCTTTCTCACCCCCACTC
ATGCATACTATCCCTCAAGTGTTGTTGGAACTTGAAATGGGTAATGCAAGTATACTACTGCTTGGCTTGGACAGGGGACATGATATGGAAGGCCAAGACATGCTG
ACACAAGGCTTCACGCACGTCTTCTCAATGACGTTTGATGACAAAGAAGCCATCGCTTCATTTCTTACCCATCCTAAGCATCTTGAATTCTGTCCCACTTTCAGT
GCAGCCATTGACAAGATTGTAGTCCTTGATTTCCCATCACTTCTTGTCAAGACACCTGCACCACCTCCATCACTGCCACCGCCACCGCCGCCACCACCAGTGGAA
ATGACACCGGAAGTTGCTTTGCCACCAGTGCTGACATCCACACCTCTACCACCACCAGTACCAACACCTGCCCCTGCCCCTGTCCCAACACCGGCATCTGCTTCA
GCATGA
Protein sequenceShow/hide protein sequence
MDAVNMETKPSITASAIAIAIANFRRLIATIRKANLGNGTWGVSADRGGKTTMAEFKHLVVVKFKEGVNVDEIVEQVEKMVSDIDSVKSFEWYFSRFKSPFSPPL
MHTIPQVLLELEMGNASILLLGLDRGHDMEGQDMLTQGFTHVFSMTFDDKEAIASFLTHPKHLEFCPTFSAAIDKIVVLDFPSLLVKTPAPPPSLPPPPPPPPVE
MTPEVALPPVLTSTPLPPPVPTPAPAPVPTPASASA