| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0039608.1 reverse transcriptase [Cucumis melo var. makuwa] | 5.0e-92 | 56.29 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
A+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ K CSVE TAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGR
LG++LNISSSYHPQTDG+
Subjt: LGSTLNISSSYHPQTDGR
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| KAA0050676.1 reverse transcriptase [Cucumis melo var. makuwa] | 4.1e-94 | 60.34 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL--------KLAGLLEPLPVPSRPWESVSL
A+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL K+AGLL+PLPVP+RPWESVS+
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL--------KLAGLLEPLPVPSRPWESVSL
Query: DFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTLNISSSYHPQTDGR
DFIT LPKVG+FEAILVI+DRFSKYATF+ K CS E TAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF LG++LNISSSYHPQTDG+
Subjt: DFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTLNISSSYHPQTDGR
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| KAA0052269.1 reverse transcriptase [Cucumis melo var. makuwa] | 4.5e-93 | 56.6 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE LVEFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ T K CS EMTAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGR
LG++LNISSSYHPQTDG+
Subjt: LGSTLNISSSYHPQTDGR
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| KAA0059106.1 reverse transcriptase [Cucumis melo var. makuwa] | 5.0e-92 | 55.8 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
A+ GKTRQFWVED+L TKGNRLYVP++G LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ K CS E TAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGRV
LG++LNISSSYHPQTDG++
Subjt: LGSTLNISSSYHPQTDGRV
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| TYK01597.1 reverse transcriptase [Cucumis melo var. makuwa] | 1.0e-92 | 56.29 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ T K CS EMTAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGR
LG++LNISSSYHPQTDG+
Subjt: LGSTLNISSSYHPQTDGR
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P9 Reverse transcriptase | 2.4e-92 | 56.29 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
A+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ K CSVE TAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGR
LG++LNISSSYHPQTDG+
Subjt: LGSTLNISSSYHPQTDGR
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| A0A5A7U921 Reverse transcriptase | 2.0e-94 | 60.34 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL--------KLAGLLEPLPVPSRPWESVSL
A+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL K+AGLL+PLPVP+RPWESVS+
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL--------KLAGLLEPLPVPSRPWESVSL
Query: DFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTLNISSSYHPQTDGR
DFIT LPKVG+FEAILVI+DRFSKYATF+ K CS E TAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF LG++LNISSSYHPQTDG+
Subjt: DFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTLNISSSYHPQTDGR
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| A0A5A7UFL8 Reverse transcriptase | 2.2e-93 | 56.6 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE LVEFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ T K CS EMTAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGR
LG++LNISSSYHPQTDG+
Subjt: LGSTLNISSSYHPQTDGR
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| A0A5A7UY33 Reverse transcriptase | 2.4e-92 | 55.8 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
A+ GKTRQFWVED+L TKGNRLYVP++G LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ K CS E TAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGRV
LG++LNISSSYHPQTDG++
Subjt: LGSTLNISSSYHPQTDGRV
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| A0A5D3BQE4 Reverse transcriptase | 4.9e-93 | 56.29 | Show/hide |
Query: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
MLA+VHCLRAWRQYLL FVVKTDNS+ HFFTQPKL+ KQARWQE L EFDF+FEH+
Subjt: MLAIVHCLRAWRQYLLRFKFVVKTDNSSIYHFFTQPKLSFKQARWQECLVEFDFQFEHRP----------------------------------------
Query: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
+ GKTRQFWVE++LL TKGNRLYVP++G+LR+ LL ECHDT WAGH WQRTYALL
Subjt: --------------AREGKTRQFWVEDNLLFTKGNRLYVPQSGELRRLLLKECHDTPWAGHNDWQRTYALL-----------------------------
Query: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
K+AGLL+PLPVP+RPWESVS+DFIT LPKVG+FEAILVI+DRFSKYATF+ T K CS EMTAQLFFKH+VKLWG+P SIVSDR+ RF +FWTELF
Subjt: --KLAGLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQM
Query: LGSTLNISSSYHPQTDGR
LG++LNISSSYHPQTDG+
Subjt: LGSTLNISSSYHPQTDGR
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 5.3e-20 | 39.68 | Show/hide |
Query: GLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTL
G L+P+P RPWES+S+DFIT LP+ + A+ V+VDRFSK A V K + E TA++F + ++ +G P I++D + FT W + +
Subjt: GLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTL
Query: NISSSYHPQTDG---RVLPSVRHLLR
S Y PQTDG R +V LLR
Subjt: NISSSYHPQTDG---RVLPSVRHLLR
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| P0CT41 Transposon Tf2-12 polyprotein | 5.3e-20 | 39.68 | Show/hide |
Query: GLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTL
G L+P+P RPWES+S+DFIT LP+ + A+ V+VDRFSK A V K + E TA++F + ++ +G P I++D + FT W + +
Subjt: GLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTL
Query: NISSSYHPQTDG---RVLPSVRHLLR
S Y PQTDG R +V LLR
Subjt: NISSSYHPQTDG---RVLPSVRHLLR
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| Q7LHG5 Transposon Ty3-I Gag-Pol polyprotein | 3.3e-22 | 41.91 | Show/hide |
Query: KLAGLLEPLPVPSRPWESVSLDFITRLPKV-GEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQML
+L GLL+PLP+ W +S+DF+T LP ILV+VDRFSK A F++T K L F++I G P +I SDR+ R T + EL + L
Subjt: KLAGLLEPLPVPSRPWESVSLDFITRLPKV-GEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQML
Query: GSTLNISSSYHPQTDG---RVLPSVRHLLRLYVADN
G +SS+ HPQTDG R + ++ LLR YV+ N
Subjt: GSTLNISSSYHPQTDG---RVLPSVRHLLRLYVADN
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| Q99315 Transposon Ty3-G Gag-Pol polyprotein | 9.7e-22 | 41.18 | Show/hide |
Query: KLAGLLEPLPVPSRPWESVSLDFITRLPKV-GEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQML
+L GLL+PLP+ W +S+DF+T LP ILV+VDRFSK A F++T K L F++I G P +I SDR+ R T + EL + L
Subjt: KLAGLLEPLPVPSRPWESVSLDFITRLPKV-GEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQML
Query: GSTLNISSSYHPQTDG---RVLPSVRHLLRLYVADN
G +SS+ HPQTDG R + ++ LLR Y + N
Subjt: GSTLNISSSYHPQTDG---RVLPSVRHLLRLYVADN
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| Q9UR07 Transposon Tf2-11 polyprotein | 5.3e-20 | 39.68 | Show/hide |
Query: GLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTL
G L+P+P RPWES+S+DFIT LP+ + A+ V+VDRFSK A V K + E TA++F + ++ +G P I++D + FT W + +
Subjt: GLLEPLPVPSRPWESVSLDFITRLPKVGEFEAILVIVDRFSKYATFVSTPKLCSVEMTAQLFFKHIVKLWGIPASIVSDRNARFTRTFWTELFQMLGSTL
Query: NISSSYHPQTDG---RVLPSVRHLLR
S Y PQTDG R +V LLR
Subjt: NISSSYHPQTDG---RVLPSVRHLLR
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