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Clc01G13970 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G13970
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSerine/threonine-protein kinase AtPK2/AtPK19
Genome locationClcChr01:26836085..26836570
RNA-Seq ExpressionClc01G13970
SyntenyClc01G13970
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN64274.1 hypothetical protein Csa_013446 [Cucumis sativus]1.3e-6388.48Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAG-STATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYS
        MIGKE+RSTESLCEKSMLLVANLIKLSSSISFA+TA NE TAG ST TRRRS GNPAATPLIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYS
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAG-STATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYS

Query:  SSSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN
        SSSSS+   VI EESDFDE NVDGWASEYIEKVHKNRKDFEQSTMKKP SMAKSR RR NSSVLN
Subjt:  SSSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN

TYJ99125.1 hypothetical protein E5676_scaffold248G003300 [Cucumis melo var. makuwa]2.0e-6489.02Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSS
        MI KE+RSTESLCEKSMLLVANLIKLSSSISFAKTA NEATAGS  TRRRS GNPAATPLIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYS+
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSS

Query:  SSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN
        SSSS+   VI EESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKP SMAKSR RR NSSVLN
Subjt:  SSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN

XP_022954798.1 uncharacterized protein LOC111456949 [Cucurbita moschata]4.5e-6184.28Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSS-
        MIGKE RS+ESLCEKSMLLVANLIKLSSSISFAKTANE TAGS A  R+SRGNPA TPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSS S 
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSS-

Query:  SSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS
         S SSY+I+EESDF EANVDGWASEYIEKVHKNRK+ ++ST KKP+S+A+SRLRRA+S+
Subjt:  SSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS

XP_022994676.1 uncharacterized protein LOC111490318 [Cucurbita maxima]8.5e-6083.54Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSSS
        MI KE RS+ESLCEKSMLLVANLIKLSSSISFAKTANE TAGS A  R+SRGNPA TPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRY  SS 
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSSS

Query:  SASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS
        S SSY+I+EESDF EANVDGWASEYIEKVHKNRK+ ++ST KKP+S+A+SRLRRA+S+
Subjt:  SASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS

XP_023541667.1 uncharacterized protein LOC111801757 [Cucurbita pepo subsp. pepo]5.9e-6184.28Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSS-SS
        MIGKE RS+ESLCEKSMLLVANLIKLSSSISFAKTANE TAGS A  R+SRGNPA TPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSS SS
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSS-SS

Query:  SSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS
         S SSY+I+EESDF EANVDGWASEYIEKVHKNRK+ ++ST KKP+ +A+SRLRRA+S+
Subjt:  SSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS

TrEMBL top hitse value%identityAlignment
A0A0A0LTD3 Uncharacterized protein6.1e-6488.48Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAG-STATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYS
        MIGKE+RSTESLCEKSMLLVANLIKLSSSISFA+TA NE TAG ST TRRRS GNPAATPLIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYS
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAG-STATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYS

Query:  SSSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN
        SSSSS+   VI EESDFDE NVDGWASEYIEKVHKNRKDFEQSTMKKP SMAKSR RR NSSVLN
Subjt:  SSSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN

A0A5D3BLA2 Uncharacterized protein9.5e-6589.02Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSS
        MI KE+RSTESLCEKSMLLVANLIKLSSSISFAKTA NEATAGS  TRRRS GNPAATPLIPGS+RLQEPQSRAKPIYVTKPGGGGFQIGHG  SPRYS+
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTA-NEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHG--SPRYSS

Query:  SSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN
        SSSS+   VI EESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKP SMAKSR RR NSSVLN
Subjt:  SSSSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN

A0A6J1E7B0 uncharacterized protein LOC1114314593.3e-5781.01Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSSS
        MIGKE RS+ESLCEKSMLL+ANLIKLSSSISFA TANEATAG++ATR RS GN AATPLIPGSRRLQEPQSRAKPIYVTKPGGG FQI HGSPRYS SSS
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSSS

Query:  SASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQ-STMKKPHSMAKSRLRRANS
        S+SS VI  ESD DEANVDGWAS+YIE+VH+NRKDF+Q  T +KP+SM K+RLR A S
Subjt:  SASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQ-STMKKPHSMAKSRLRRANS

A0A6J1GS37 uncharacterized protein LOC1114569492.2e-6184.28Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSS-
        MIGKE RS+ESLCEKSMLLVANLIKLSSSISFAKTANE TAGS A  R+SRGNPA TPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSS S 
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSS-

Query:  SSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS
         S SSY+I+EESDF EANVDGWASEYIEKVHKNRK+ ++ST KKP+S+A+SRLRRA+S+
Subjt:  SSASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS

A0A6J1JZU4 uncharacterized protein LOC1114903184.1e-6083.54Show/hide
Query:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSSS
        MI KE RS+ESLCEKSMLLVANLIKLSSSISFAKTANE TAGS A  R+SRGNPA TPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRY  SS 
Subjt:  MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSSS

Query:  SASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS
        S SSY+I+EESDF EANVDGWASEYIEKVHKNRK+ ++ST KKP+S+A+SRLRRA+S+
Subjt:  SASSYVIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCGGTAAAGAAGCAAGATCCACCGAATCGCTCTGCGAGAAGTCCATGTTGTTGGTAGCCAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCAAAGACG
GCGAATGAAGCAACCGCTGGATCTACGGCCACCAGACGCCGATCGAGAGGAAATCCGGCGGCGACGCCTCTGATTCCGGGGAGTAGACGGCTACAGGAGCCGCAG
AGCCGAGCGAAGCCGATCTATGTGACGAAACCGGGTGGAGGCGGCTTCCAAATCGGGCATGGATCGCCGAGGTATTCGTCGTCTTCTTCTTCGGCTTCTTCGTAT
GTGATTCAGGAAGAGAGCGATTTTGATGAGGCGAATGTGGATGGTTGGGCGTCTGAGTACATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACC
ATGAAGAAACCGCATTCAATGGCTAAAAGTCGCCTTCGTAGAGCTAATTCCTCTGTTCTAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCGGTAAAGAAGCAAGATCCACCGAATCGCTCTGCGAGAAGTCCATGTTGTTGGTAGCCAATTTAATCAAGCTTTCCAGTTCGATTTCTTTCGCAAAGACG
GCGAATGAAGCAACCGCTGGATCTACGGCCACCAGACGCCGATCGAGAGGAAATCCGGCGGCGACGCCTCTGATTCCGGGGAGTAGACGGCTACAGGAGCCGCAG
AGCCGAGCGAAGCCGATCTATGTGACGAAACCGGGTGGAGGCGGCTTCCAAATCGGGCATGGATCGCCGAGGTATTCGTCGTCTTCTTCTTCGGCTTCTTCGTAT
GTGATTCAGGAAGAGAGCGATTTTGATGAGGCGAATGTGGATGGTTGGGCGTCTGAGTACATAGAGAAAGTTCATAAGAACAGGAAGGATTTTGAACAATCGACC
ATGAAGAAACCGCATTCAATGGCTAAAAGTCGCCTTCGTAGAGCTAATTCCTCTGTTCTAAATTAG
Protein sequenceShow/hide protein sequence
MIGKEARSTESLCEKSMLLVANLIKLSSSISFAKTANEATAGSTATRRRSRGNPAATPLIPGSRRLQEPQSRAKPIYVTKPGGGGFQIGHGSPRYSSSSSSASSY
VIQEESDFDEANVDGWASEYIEKVHKNRKDFEQSTMKKPHSMAKSRLRRANSSVLN