; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G14220 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G14220
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein of unknown function (DUF1118)
Genome locationClcChr01:27055507..27057200
RNA-Seq ExpressionClc01G14220
SyntenyClc01G14220
Gene Ontology termsGO:0032774 - RNA biosynthetic process (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR009500 - Protein of unknown function DUF1118


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152441.1 uncharacterized protein LOC101214681 [Cucumis sativus]1.4e-7888.24Show/hide
Query:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR-----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKK
        MAVTSQSPSSS      TA LSHL +RFSI+RF H+SN+ R      SRSNPLTI AMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKK
Subjt:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR-----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKK

Query:  VLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGS
        VLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAAL AIV+IPDDSVALVALQAVVGGGLALGAAGL VGS
Subjt:  VLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGS

Query:  VVLG
        VVLG
Subjt:  VVLG

XP_008437595.1 PREDICTED: uncharacterized protein LOC103482961 [Cucumis melo]3.4e-7787.56Show/hide
Query:  VTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS
        +TS SPSSS      TA+LSH P+RFSI+R  H+SNH R     SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS
Subjt:  VTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS

Query:  NVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL
        NVEKAGLLSKAEELG TLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAAL AIV+IPDDSVALVALQAVVGGGLALGAAGL VGSVVL
Subjt:  NVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL

Query:  G
        G
Subjt:  G

XP_022137512.1 uncharacterized protein LOC111008941 [Momordica charantia]1.1e-7588.08Show/hide
Query:  SSSTATATATAALSHLPSRFSITRFRHVSNHVR--PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLL
        S S+A A ATAA SHLP++F  ++FRH  NH R  PSRSN LTIVAMAP+KKVNKYDD W+KKWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLL
Subjt:  SSSTATATATAALSHLPSRFSITRFRHVSNHVR--PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLL

Query:  SKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVLG
        SKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDS ALVALQAVVGGGLALGAAGL VGSVVLG
Subjt:  SKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVLG

XP_023000865.1 uncharacterized protein LOC111495182 [Cucurbita maxima]4.2e-7585.64Show/hide
Query:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVRP---SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVL
        MAVT+QSPSSS       AA S LP+RFSI+RFRH SNH RP   SRSNPL I+AMA QKKVNKYDD WEKKWFGAGIFYES+EDVEVDVFKKLETKKVL
Subjt:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVRP---SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVL

Query:  SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVV
        SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEE GLLSLLEKVAS+SPS LASLALPILVAALAAIVLIPDDS  LVALQAVV GGL LGAAGLFVGSVV
Subjt:  SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVV

Query:  LG
        LG
Subjt:  LG

XP_038895665.1 uncharacterized protein LOC120083851 [Benincasa hispida]1.2e-7990.1Show/hide
Query:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVRP---SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVL
        MAVTSQSPSSS     ATAA SHL +RFSI RFRHVSNH RP   S  NPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVL
Subjt:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVRP---SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVL

Query:  SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVV
        SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEK+ SSSPSALASLALPILV ALAAIVLIPDDSVALV LQAVVGGGLALGAAGL VGSVV
Subjt:  SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVV

Query:  LG
        LG
Subjt:  LG

TrEMBL top hitse value%identityAlignment
A0A0A0LW40 Uncharacterized protein6.7e-7988.24Show/hide
Query:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR-----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKK
        MAVTSQSPSSS      TA LSHL +RFSI+RF H+SN+ R      SRSNPLTI AMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKK
Subjt:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR-----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKK

Query:  VLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGS
        VLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAAL AIV+IPDDSVALVALQAVVGGGLALGAAGL VGS
Subjt:  VLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGS

Query:  VVLG
        VVLG
Subjt:  VVLG

A0A1S3AV09 uncharacterized protein LOC1034829611.6e-7787.56Show/hide
Query:  VTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS
        +TS SPSSS      TA+LSH P+RFSI+R  H+SNH R     SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS
Subjt:  VTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS

Query:  NVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL
        NVEKAGLLSKAEELG TLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAAL AIV+IPDDSVALVALQAVVGGGLALGAAGL VGSVVL
Subjt:  NVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL

Query:  G
        G
Subjt:  G

A0A5D3BL78 DUF1118 domain-containing protein1.6e-7787.56Show/hide
Query:  VTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS
        +TS SPSSS      TA+LSH P+RFSI+R  H+SNH R     SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS
Subjt:  VTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVR----PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLS

Query:  NVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL
        NVEKAGLLSKAEELG TLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAAL AIV+IPDDSVALVALQAVVGGGLALGAAGL VGSVVL
Subjt:  NVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL

Query:  G
        G
Subjt:  G

A0A6J1C8G3 uncharacterized protein LOC1110089415.3e-7688.08Show/hide
Query:  SSSTATATATAALSHLPSRFSITRFRHVSNHVR--PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLL
        S S+A A ATAA SHLP++F  ++FRH  NH R  PSRSN LTIVAMAP+KKVNKYDD W+KKWFGAGIFYES+EDVEVDVFKKLETKKVLSNVEKAGLL
Subjt:  SSSTATATATAALSHLPSRFSITRFRHVSNHVR--PSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLL

Query:  SKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVLG
        SKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDS ALVALQAVVGGGLALGAAGL VGSVVLG
Subjt:  SKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVLG

A0A6J1KJH4 uncharacterized protein LOC1114951822.0e-7585.64Show/hide
Query:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVRP---SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVL
        MAVT+QSPSSS       AA S LP+RFSI+RFRH SNH RP   SRSNPL I+AMA QKKVNKYDD WEKKWFGAGIFYES+EDVEVDVFKKLETKKVL
Subjt:  MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVRP---SRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVL

Query:  SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVV
        SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEE GLLSLLEKVAS+SPS LASLALPILVAALAAIVLIPDDS  LVALQAVV GGL LGAAGLFVGSVV
Subjt:  SNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVV

Query:  LG
        LG
Subjt:  LG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G74730.1 Protein of unknown function (DUF1118)9.6e-4659.8Show/hide
Query:  MAVTSQSPSSSTATATATAALSH-LPSRFSITRFRHVSNHVRPSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSN
        MAV   +P SS A    T  LS+ +  RF     R  S    P+     ++VAMAPQKKVNKYD  W+K+W+GAG+F+E +E + VDVFKKLE +KVLSN
Subjt:  MAVTSQSPSSSTATATATAALSH-LPSRFSITRFRHVSNHVRPSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSN

Query:  VEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL
        VEK+GLLSKAE LG TLSS+EKL VFSKAE+LGLLSLLE +A +SP+ LAS ALP L AA+ A+VLIPDDS  LV  QAV+ G LAL    L VGSVVL
Subjt:  VEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVL

AT5G08050.1 Protein of unknown function (DUF1118)2.5e-0938.66Show/hide
Query:  ESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSV------
        +S    +V +  ++E  K+L+  EKAGLLS AE+ GF+LS+IE+LG+ +KAEE G+LS        +P  L +L+L +L+       ++P+D        
Subjt:  ESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAEELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSV------

Query:  ALVALQAVVGGGLALGAAG
         LVAL +V+GG  A  A+G
Subjt:  ALVALQAVVGGGLALGAAG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTCACTTCACAATCTCCATCTTCCTCCACTGCCACTGCCACTGCCACTGCTGCTCTCTCTCACCTTCCCAGCCGCTTCTCAATTACCAGATTCCGCCACGTCTC
TAACCATGTTCGACCCTCCAGATCCAATCCACTCACCATCGTCGCCATGGCTCCTCAGAAGAAGGTGAACAAATACGACGACGCGTGGGAGAAGAAATGGTTTGGAGCTG
GAATCTTCTACGAGAGCGCGGAGGATGTGGAAGTCGATGTGTTCAAGAAGCTTGAGACGAAGAAAGTGCTTAGCAATGTCGAAAAAGCAGGGCTGTTATCGAAGGCGGAG
GAATTAGGGTTTACGCTTTCTTCGATTGAGAAATTGGGGGTTTTCTCAAAAGCTGAGGAGTTGGGGCTTCTTAGCTTGCTTGAGAAGGTTGCCAGCTCTTCTCCCTCCGC
TTTGGCTTCCCTTGCCCTTCCGATTCTCGTTGCGGCGCTGGCGGCGATTGTTCTTATTCCGGATGACTCGGTGGCGCTTGTAGCGTTGCAGGCGGTGGTCGGCGGCGGAC
TGGCGCTTGGGGCCGCCGGATTGTTCGTTGGATCGGTGGTGCTGGGTTTAGATGTCTTGAATGGGAGGAGAGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTCACTTCACAATCTCCATCTTCCTCCACTGCCACTGCCACTGCCACTGCTGCTCTCTCTCACCTTCCCAGCCGCTTCTCAATTACCAGATTCCGCCACGTCTC
TAACCATGTTCGACCCTCCAGATCCAATCCACTCACCATCGTCGCCATGGCTCCTCAGAAGAAGGTGAACAAATACGACGACGCGTGGGAGAAGAAATGGTTTGGAGCTG
GAATCTTCTACGAGAGCGCGGAGGATGTGGAAGTCGATGTGTTCAAGAAGCTTGAGACGAAGAAAGTGCTTAGCAATGTCGAAAAAGCAGGGCTGTTATCGAAGGCGGAG
GAATTAGGGTTTACGCTTTCTTCGATTGAGAAATTGGGGGTTTTCTCAAAAGCTGAGGAGTTGGGGCTTCTTAGCTTGCTTGAGAAGGTTGCCAGCTCTTCTCCCTCCGC
TTTGGCTTCCCTTGCCCTTCCGATTCTCGTTGCGGCGCTGGCGGCGATTGTTCTTATTCCGGATGACTCGGTGGCGCTTGTAGCGTTGCAGGCGGTGGTCGGCGGCGGAC
TGGCGCTTGGGGCCGCCGGATTGTTCGTTGGATCGGTGGTGCTGGGTTTAGATGTCTTGAATGGGAGGAGAGGATGA
Protein sequenceShow/hide protein sequence
MAVTSQSPSSSTATATATAALSHLPSRFSITRFRHVSNHVRPSRSNPLTIVAMAPQKKVNKYDDAWEKKWFGAGIFYESAEDVEVDVFKKLETKKVLSNVEKAGLLSKAE
ELGFTLSSIEKLGVFSKAEELGLLSLLEKVASSSPSALASLALPILVAALAAIVLIPDDSVALVALQAVVGGGLALGAAGLFVGSVVLGLDVLNGRRG