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Clc01G15070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionIron-sulfur binding oxidoreductase
Genome locationClcChr01:27801340..27802035
RNA-Seq ExpressionClc01G15070
SyntenyClc01G15070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025184.1 Iron-sulfur binding oxidoreductase [Cucumis melo var. makuwa]1.4e-0832.76Show/hide
Query:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF
        M    G  VG  + GR       G F+ I +   D ++ QI  + L V+AA+  +E+KL  V+SA + +   GK Y++T+  + K N+ W+   Y  EV+
Subjt:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF

Query:  IPFIGHWDCKSYMLIN
        +P +G W+ +S+ L N
Subjt:  IPFIGHWDCKSYMLIN
KAE8645929.1 hypothetical protein Csa_021384 [Cucumis sativus]1.2e-0429.82Show/hide
Query:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF
        M    G  VG  + GR+      G F+ I++   D ++ +I  + L V++ +  +E+KL AV++A + +   GK Y+  + ++ K N     Q Y  EV+
Subjt:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF

Query:  IPFIGHWDCKSYML
        IP +G W+ +S+ L
Subjt:  IPFIGHWDCKSYML
TrEMBL top hitse value%identityAlignment
A0A0A0KKM6 Iron-sulfur binding oxidoreductase6.0e-0529.82Show/hide
Query:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF
        M    G  VG  + GR+      G F+ I++   D ++ +I  + L V++ +  +E+KL AV++A + +   GK Y+  + ++ K N     Q Y  EV+
Subjt:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF

Query:  IPFIGHWDCKSYML
        IP +G W+ +S+ L
Subjt:  IPFIGHWDCKSYML
A0A5A7SHS8 Iron-sulfur binding oxidoreductase6.9e-0932.76Show/hide
Query:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF
        M    G  VG  + GR       G F+ I +   D ++ QI  + L V+AA+  +E+KL  V+SA + +   GK Y++T+  + K N+ W+   Y  EV+
Subjt:  MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLG-DTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVF

Query:  IPFIGHWDCKSYMLIN
        +P +G W+ +S+ L N
Subjt:  IPFIGHWDCKSYMLIN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGATGACGTTGGGAGCAATTGTAGGTGTGTTGAATGTGGGTAGACAAATATCAGATGGTATCCACGGAATTTTCCAACCCATTGAAGATCTTGGGGACACAATTAT
ACAGCAAATTGTAAAATTCGTGTTGGAAGTGATGGCGGCGGAGTCAGGGCTTGAGGTGAAGCTGGATGCTGTGTTGAGTGCTCAGCTTAGGGTATTGCCCAACGGCAAAT
TCTACCAGATTACACTGGCGCTTAATGTCAAAGTCAACAATGCGTGGATTACTCAAAAATATGTATTTGAAGTCTTTATCCCATTTATTGGCCATTGGGATTGCAAATCC
TACATGTTGATAAACTAA
mRNA sequenceShow/hide mRNA sequence
AAGGAGGATAGGTAAATTAGAATTAGCATATAGGAATAACATTCAAATAAAAATATGGTTGATTTGGGAAGTTGATGGAAGTTGAAGGATAAAGGAGGTAGGAGTAGTAG
TGGTAGTATATATATATAAAGGTGAAAGTAGCAGATCAGAATTGGTCGAAAGCAAAGTAAGTAGAAGCATTAGAAAGGCTAAGGCTATCCATCCACAAAAGGTGAATAAT
TAAGATGAAGATGACGTTGGGAGCAATTGTAGGTGTGTTGAATGTGGGTAGACAAATATCAGATGGTATCCACGGAATTTTCCAACCCATTGAAGATCTTGGGGACACAA
TTATACAGCAAATTGTAAAATTCGTGTTGGAAGTGATGGCGGCGGAGTCAGGGCTTGAGGTGAAGCTGGATGCTGTGTTGAGTGCTCAGCTTAGGGTATTGCCCAACGGC
AAATTCTACCAGATTACACTGGCGCTTAATGTCAAAGTCAACAATGCGTGGATTACTCAAAAATATGTATTTGAAGTCTTTATCCCATTTATTGGCCATTGGGATTGCAA
ATCCTACATGTTGATAAACTAAACTAAATCCCCACTATTCTACTATTCCTCATTCCAACACACTTTCTCTCGAACTTCTTTTTCTATATCTGTGAGCATTTAGGTGTCAA
GAAAACTTATATGATATTAAATTTAGTTTCTTGTCA
Protein sequenceShow/hide protein sequence
MKMTLGAIVGVLNVGRQISDGIHGIFQPIEDLGDTIIQQIVKFVLEVMAAESGLEVKLDAVLSAQLRVLPNGKFYQITLALNVKVNNAWITQKYVFEVFIPFIGHWDCKS
YMLIN