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Clc01G15110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:27820132..27820665
RNA-Seq ExpressionClc01G15110
SyntenyClc01G15110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647454.1 hypothetical protein Csa_003781 [Cucumis sativus]1.4e-0551.02Show/hide
Query:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI
        NGKTY+L LK+KV++GD YV+K ++V  F PF+G P+ +SF+Y+++++I
Subjt:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI

KGN48337.1 hypothetical protein Csa_004454 [Cucumis sativus]9.8e-0454Show/hide
Query:  PNGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI
        PNGKTY+L LKLK KVGD YVLK  V+  F P  G P+ +SF+  K++++
Subjt:  PNGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI

TrEMBL top hitse value%identityAlignment
A0A0A0KFK8 Uncharacterized protein5.1e-0651.02Show/hide
Query:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI
        NGKTY+L LK+KV++GD YV+K ++V  F PF+G P+ +SF+Y+++++I
Subjt:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI

A0A0A0KFL5 Uncharacterized protein5.1e-0660Show/hide
Query:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVK
        NGKTYS  LKLK+KVGD YV+K ++V  F PFIG+P+ +SF+Y++
Subjt:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVK

A0A0A0KIX9 Uncharacterized protein4.8e-0454Show/hide
Query:  PNGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI
        PNGKTY+L LKLK KVGD YVLK  V+  F P  G P+ +SF+  K++++
Subjt:  PNGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI

A0A0A0KKQ8 Uncharacterized protein3.0e-0655.1Show/hide
Query:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI
        NGKTY L LKLKV++GD YV+K ++V  F PF+G P+ +SF+Y++++SI
Subjt:  NGKTYSLTLKLKVKVGDGYVLKEIVV--FAPFIGIPTAMSFDYVKDVSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCTTACGGGAAGCATTTCTTGCAACCTTCCAATTCTATTGGTGGTTATGTTGGACAAGAGCGAAATTAAGAGACGGATTCCGCGTTCCAAGCCTCGACCCAATGG
GAAAACATACAGCCTAACTTTGAAGCTAAAGGTCAAGGTCGGTGATGGTTATGTACTTAAAGAGATTGTAGTGTTTGCTCCATTCATCGGCATTCCAACCGCCATGTCTT
TCGACTATGTCAAAGATGTCAGCATCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCTTACGGGAAGCATTTCTTGCAACCTTCCAATTCTATTGGTGGTTATGTTGGACAAGAGCGAAATTAAGAGACGGATTCCGCGTTCCAAGCCTCGACCCAATGG
GAAAACATACAGCCTAACTTTGAAGCTAAAGGTCAAGGTCGGTGATGGTTATGTACTTAAAGAGATTGTAGTGTTTGCTCCATTCATCGGCATTCCAACCGCCATGTCTT
TCGACTATGTCAAAGATGTCAGCATCTAA
Protein sequenceShow/hide protein sequence
MSLTGSISCNLPILLVVMLDKSEIKRRIPRSKPRPNGKTYSLTLKLKVKVGDGYVLKEIVVFAPFIGIPTAMSFDYVKDVSI