; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G15430 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15430
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-type E3 ubiquitin transferase
Genome locationClcChr01:28185434..28186285
RNA-Seq ExpressionClc01G15430
SyntenyClc01G15430
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044602 - RING-H2 finger protein ATL10/ATL75-79


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604272.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. sororia]6.5e-9281.31Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSI+NSRRLLLP+ T  ASPP LAQPRPGFGSFDMNVVMVLSVLLCAL+CSLGLNAILKCALRCS+LLAT+SGGR GG   VHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSV------EPPAAEEVGVNVVI
         KEGNKLRGIDGECVICLLEFE GDRVRVLPKC+HGFHVHCIDKWLSSH SCPKCRNCLTDTCHKI +G  QEA     +       PP  EEV VNVVI
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSV------EPPAAEEVGVNVVI

Query:  APVEREGLISNYRE
        APVEREGL+ NYR+
Subjt:  APVEREGLISNYRE

KAG7034428.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-9180.93Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSI+NSRRLLLP+ T  ASPP LAQPRPGFGSFDMNVVMVLSVLLCAL+CSLGLNAILKCALRCS+LLAT+SGGR GG   VHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSV---------EPPAAEEVGVN
         KEGNKLRGIDGECVICLLEFE GDRVRVLPKCFHGFHVHCIDKWLSSH SCPKCRNCLTDTCHKI +G  QEA     +          PP  EEV VN
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSV---------EPPAAEEVGVN

Query:  VVIAPVEREGLISNY
        VVIAPVEREGL+ NY
Subjt:  VVIAPVEREGLISNY

XP_004148642.1 RING-H2 finger protein ATL78 [Cucumis sativus]1.7e-10892.2Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSISNSRR L+PSAT AA+PPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGR GGALVVHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE------AESSSSVEPPAAEEVGVNVVI
        SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKC+HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGC QE      AESSSSVEPP AEEVGVNVVI
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE------AESSSSVEPPAAEEVGVNVVI

Query:  APVEREGLISNYRESISR
        APVEREG+I+NYRES+SR
Subjt:  APVEREGLISNYRESISR

XP_008441014.1 PREDICTED: RING-H2 finger protein ATL78 [Cucumis melo]8.5e-10891.4Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSISNSRR LLPS TAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGR GGALVVHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE---------AESSSSVEPPAAEEVGVN
        SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKC+HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKI AGCGQE         AESSSSVEPP AEEV VN
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE---------AESSSSVEPPAAEEVGVN

Query:  VVIAPVEREGLISNYRESISR
        VVIAPVEREG+I+NYRES+SR
Subjt:  VVIAPVEREGLISNYRESISR

XP_038882744.1 RING-H2 finger protein ATL78 [Benincasa hispida]2.4e-11094.09Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGR GGALVVHPKGVRRN+LKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE--------AESSSSVEPPAAEEVGVNV
        SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKC+HGFHVHCIDKWLSSHTSCPKCRNCLTDTC KITAGCGQE        AESSSSV+PPAAEEVGVNV
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE--------AESSSSVEPPAAEEVGVNV

Query:  VIAPVEREGLISNYRESISR
        VIAPVEREGLISNYRESISR
Subjt:  VIAPVEREGLISNYRESISR

TrEMBL top hitse value%identityAlignment
A0A0A0KF92 RING-type E3 ubiquitin transferase8.3e-10992.2Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSISNSRR L+PSAT AA+PPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGR GGALVVHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE------AESSSSVEPPAAEEVGVNVVI
        SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKC+HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGC QE      AESSSSVEPP AEEVGVNVVI
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE------AESSSSVEPPAAEEVGVNVVI

Query:  APVEREGLISNYRESISR
        APVEREG+I+NYRES+SR
Subjt:  APVEREGLISNYRESISR

A0A1S3B203 RING-type E3 ubiquitin transferase4.1e-10891.4Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSISNSRR LLPS TAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGR GGALVVHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE---------AESSSSVEPPAAEEVGVN
        SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKC+HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKI AGCGQE         AESSSSVEPP AEEV VN
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE---------AESSSSVEPPAAEEVGVN

Query:  VVIAPVEREGLISNYRESISR
        VVIAPVEREG+I+NYRES+SR
Subjt:  VVIAPVEREGLISNYRESISR

A0A5A7SLG8 RING-type E3 ubiquitin transferase4.1e-10891.4Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSISNSRR LLPS TAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGR GGALVVHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE---------AESSSSVEPPAAEEVGVN
        SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKC+HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKI AGCGQE         AESSSSVEPP AEEV VN
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE---------AESSSSVEPPAAEEVGVN

Query:  VVIAPVEREGLISNYRESISR
        VVIAPVEREG+I+NYRES+SR
Subjt:  VVIAPVEREGLISNYRESISR

A0A6J1GCL7 RING-type E3 ubiquitin transferase6.6e-9080.28Show/hide
Query:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY
        MSI+NSRRLLLP+ T  ASPP  AQPRPGFGSFDMNVVMVLSVLLCAL+CSLGLNA+LKCALRCS+LLAT+SGGR GG   VHPKGVRRNVLKKFPTVEY
Subjt:  MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEY

Query:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSV------EPPAAEEVGVNVVI
         KEGNKLRGIDGECVICL EFE GDRVRVLP CFHGFHVHCIDKWLSSH SCPKCRNCLTDTCHKI +G  QEA     +       PP  EEV VNVVI
Subjt:  SKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSV------EPPAAEEVGVNVVI

Query:  APVEREGLISNYR
        APVEREGL+ NYR
Subjt:  APVEREGLISNYR

Q8W550 RING-type E3 ubiquitin transferase (Fragment)1.4e-8797.56Show/hide
Query:  LLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRG
        LLPS TAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGR GGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRG
Subjt:  LLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRG

Query:  IDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE
        IDGECVICLLEFEAGDRVRVLPKC+HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKI AGCGQE
Subjt:  IDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQE

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL107.6e-3544.44Show/hide
Query:  NVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVS-----GGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVL
        NV+M+LS+L+C +IC LGL+ I++CALR ST              RG +     KG+++  L+ FP V YS E N L G+D ECVICL +F +G+++R+L
Subjt:  NVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVS-----GGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVL

Query:  PKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQ----EAESSSSV-------EP---------PAAEEVGVNVVIAPVEREGLISNYRE
        PKC HGFHV CIDKWL  H +CPKCRNCL +TC KI     Q     AE +  V       EP         P      V V+IAP+E EG ++  RE
Subjt:  PKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQ----EAESSSSV-------EP---------PAAEEVGVNVVIAPVEREGLISNYRE

Q6NML0 E3 ubiquitin-protein ligase ATL762.6e-3545.56Show/hide
Query:  NVVMVLSVLLCALICSLGLNAILKCALRCSTL------LATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRV
        NV+M+LSVL+C +IC LGL+ I++CA R S+       ++++S  R         KG+++  L+ FP V YS+E N L GI  ECVICL +F +G+++R+
Subjt:  NVVMVLSVLLCALICSLGLNAILKCALRCSTL------LATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRV

Query:  LPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES
        LPKC HGFHV CIDKWL  H +CPKCR+CL +TC KI    G  +++ S    P      V V I P+E EG ++ +RES
Subjt:  LPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES

Q6NQG7 RING-H2 finger protein ATL789.6e-4652.94Show/hide
Query:  SNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKE
        S SR+LL    T   SP     P  G  +FD NVVMVLSVLLCAL+CSLGLN+I++CALRCS L+ + +GG      + +  GV+R  LK F TV YS E
Subjt:  SNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKE

Query:  GNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLI
         N L G+D EC ICL EF A +RV++LP C HGFHV CIDKWLSSH+SCP CR+CL  TC KI A C Q   S +S +PP   +  + + IAP+E E  I
Subjt:  GNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLI

Query:  SNYR
          +R
Subjt:  SNYR

Q94BY6 RING-H2 finger protein ATL751.7e-3445.14Show/hide
Query:  NVVMVLSVLLCALICSLGLNAILKCAL-RCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCF
        NV+M+LSVL+C +IC LGL+ I++CA  R S+ + +              KG+ +  L+ FP V YS E N L G+  ECVICL +F +G+++R+LPKC 
Subjt:  NVVMVLSVLLCALICSLGLNAILKCAL-RCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCF

Query:  HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES
        HGFHV CIDKWL  H +CPKCR+CL +TC KI        + S + +  A     V V IAP+E EG ++  RES
Subjt:  HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES

Q9LS99 RING-H2 finger protein ATL776.9e-3642.78Show/hide
Query:  PGFGSFDMNVVMVLSVLLCALICSLGLNAILKCA-LRCSTLL----ATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFE
        P   +   NV+M+LS+LLC +ICSLGL+ I++CA +R  + +     ++    R  ++    KG+++  LK  P V YS E N L G+  ECVICL +F 
Subjt:  PGFGSFDMNVVMVLSVLLCALICSLGLNAILKCA-LRCSTLL----ATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFE

Query:  AGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES
        AG+++RVLPKC HGFH+ CIDKWL+ H +CPKCR+CL DTC K+ + C    +++  V   A E + +   I+P+E E  ++ +RES
Subjt:  AGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein1.2e-3545.14Show/hide
Query:  NVVMVLSVLLCALICSLGLNAILKCAL-RCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCF
        NV+M+LSVL+C +IC LGL+ I++CA  R S+ + +              KG+ +  L+ FP V YS E N L G+  ECVICL +F +G+++R+LPKC 
Subjt:  NVVMVLSVLLCALICSLGLNAILKCAL-RCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVLPKCF

Query:  HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES
        HGFHV CIDKWL  H +CPKCR+CL +TC KI        + S + +  A     V V IAP+E EG ++  RES
Subjt:  HGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES

AT1G49210.1 RING/U-box superfamily protein1.9e-3645.56Show/hide
Query:  NVVMVLSVLLCALICSLGLNAILKCALRCSTL------LATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRV
        NV+M+LSVL+C +IC LGL+ I++CA R S+       ++++S  R         KG+++  L+ FP V YS+E N L GI  ECVICL +F +G+++R+
Subjt:  NVVMVLSVLLCALICSLGLNAILKCALRCSTL------LATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRV

Query:  LPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES
        LPKC HGFHV CIDKWL  H +CPKCR+CL +TC KI    G  +++ S    P      V V I P+E EG ++ +RES
Subjt:  LPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES

AT1G49220.1 RING/U-box superfamily protein5.4e-3644.44Show/hide
Query:  NVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVS-----GGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVL
        NV+M+LS+L+C +IC LGL+ I++CALR ST              RG +     KG+++  L+ FP V YS E N L G+D ECVICL +F +G+++R+L
Subjt:  NVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVS-----GGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFEAGDRVRVL

Query:  PKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQ----EAESSSSV-------EP---------PAAEEVGVNVVIAPVEREGLISNYRE
        PKC HGFHV CIDKWL  H +CPKCRNCL +TC KI     Q     AE +  V       EP         P      V V+IAP+E EG ++  RE
Subjt:  PKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQ----EAESSSSV-------EP---------PAAEEVGVNVVIAPVEREGLISNYRE

AT1G49230.1 RING/U-box superfamily protein6.8e-4752.94Show/hide
Query:  SNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKE
        S SR+LL    T   SP     P  G  +FD NVVMVLSVLLCAL+CSLGLN+I++CALRCS L+ + +GG      + +  GV+R  LK F TV YS E
Subjt:  SNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKE

Query:  GNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLI
         N L G+D EC ICL EF A +RV++LP C HGFHV CIDKWLSSH+SCP CR+CL  TC KI A C Q   S +S +PP   +  + + IAP+E E  I
Subjt:  GNKLRGIDGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLI

Query:  SNYR
          +R
Subjt:  SNYR

AT3G18773.1 RING/U-box superfamily protein4.9e-3742.78Show/hide
Query:  PGFGSFDMNVVMVLSVLLCALICSLGLNAILKCA-LRCSTLL----ATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFE
        P   +   NV+M+LS+LLC +ICSLGL+ I++CA +R  + +     ++    R  ++    KG+++  LK  P V YS E N L G+  ECVICL +F 
Subjt:  PGFGSFDMNVVMVLSVLLCALICSLGLNAILKCA-LRCSTLL----ATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGIDGECVICLLEFE

Query:  AGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES
        AG+++RVLPKC HGFH+ CIDKWL+ H +CPKCR+CL DTC K+ + C    +++  V   A E + +   I+P+E E  ++ +RES
Subjt:  AGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTATCTCCAATTCAAGAAGGCTCCTCCTTCCCTCCGCCACGGCCGCCGCCAGTCCGCCGGAGCTAGCGCAGCCGCGTCCTGGGTTCGGGAGTTTCGACATGAACGT
AGTAATGGTTCTTTCAGTTCTCCTCTGCGCTCTAATTTGCTCTCTGGGTCTCAACGCCATCTTAAAATGCGCGTTGCGGTGCTCCACTTTGCTAGCCACCGTGTCAGGGG
GGCGTCGTGGTGGGGCCTTGGTGGTACACCCGAAAGGTGTTCGACGAAATGTCTTAAAGAAATTCCCAACAGTGGAATACTCAAAAGAGGGGAATAAATTGAGGGGAATT
GATGGGGAGTGCGTGATTTGTTTGTTGGAGTTCGAAGCAGGGGATCGGGTTCGTGTATTGCCTAAATGCTTTCATGGATTCCATGTTCATTGCATCGATAAGTGGCTGAG
TTCCCACACTTCTTGTCCCAAGTGTCGTAATTGCCTCACTGACACTTGCCATAAGATCACCGCCGGCTGCGGCCAGGAGGCGGAGAGTTCTTCCTCTGTTGAACCACCGG
CGGCGGAGGAGGTGGGTGTCAATGTTGTTATTGCTCCGGTGGAAAGGGAAGGTTTGATAAGCAACTATAGGGAAAGTATTAGTAGATGA
mRNA sequenceShow/hide mRNA sequence
TAAAAAAGGACACGTCAGCTTTCTTCTTCTCCCAATCCCCACAATCCACTAATTTCGCTTTTGCTATATAAATTCCCCCAATATTCTCACTAAGAACAAAATTAATAACA
ATTCCAAAACTCCAATCTTTGAATTTTCAACATTCTCCCTCACATCCACATGTCTATCTCCAATTCAAGAAGGCTCCTCCTTCCCTCCGCCACGGCCGCCGCCAGTCCGC
CGGAGCTAGCGCAGCCGCGTCCTGGGTTCGGGAGTTTCGACATGAACGTAGTAATGGTTCTTTCAGTTCTCCTCTGCGCTCTAATTTGCTCTCTGGGTCTCAACGCCATC
TTAAAATGCGCGTTGCGGTGCTCCACTTTGCTAGCCACCGTGTCAGGGGGGCGTCGTGGTGGGGCCTTGGTGGTACACCCGAAAGGTGTTCGACGAAATGTCTTAAAGAA
ATTCCCAACAGTGGAATACTCAAAAGAGGGGAATAAATTGAGGGGAATTGATGGGGAGTGCGTGATTTGTTTGTTGGAGTTCGAAGCAGGGGATCGGGTTCGTGTATTGC
CTAAATGCTTTCATGGATTCCATGTTCATTGCATCGATAAGTGGCTGAGTTCCCACACTTCTTGTCCCAAGTGTCGTAATTGCCTCACTGACACTTGCCATAAGATCACC
GCCGGCTGCGGCCAGGAGGCGGAGAGTTCTTCCTCTGTTGAACCACCGGCGGCGGAGGAGGTGGGTGTCAATGTTGTTATTGCTCCGGTGGAAAGGGAAGGTTTGATAAG
CAACTATAGGGAAAGTATTAGTAGATGAGATTGAAGTGGGAAGTGGGAAGTGGGAAGTGGGGTTAGGCTCTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MSISNSRRLLLPSATAAASPPELAQPRPGFGSFDMNVVMVLSVLLCALICSLGLNAILKCALRCSTLLATVSGGRRGGALVVHPKGVRRNVLKKFPTVEYSKEGNKLRGI
DGECVICLLEFEAGDRVRVLPKCFHGFHVHCIDKWLSSHTSCPKCRNCLTDTCHKITAGCGQEAESSSSVEPPAAEEVGVNVVIAPVEREGLISNYRESISR