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Clc01G15480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationClcChr01:28224153..28230781
RNA-Seq ExpressionClc01G15480
SyntenyClc01G15480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441002.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo]9.6e-4771.81Show/hide
Query:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLF-TDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV
        MGACATKPK +KAE+GEA      PEE+ A TKP++ GDEKA EI V DDKVDSK RSLSNLF  DQKEG+KE  E       DP EKQET   ETEKQ 
Subjt:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLF-TDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV

Query:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        I+P PEEK SENNPP  EP VSDSVTEN T+ISSEKLMETPNE NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

XP_008441003.1 PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo]6.7e-4065.59Show/hide
Query:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQVIN
        MGACATKPK +KAE+GEA      PEE+ A TKP++ GDEKA EIV DD              D+KEG+KE  E       DP EKQET   ETEKQ I+
Subjt:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQVIN

Query:  PPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        P PEEK SENNPP  EP VSDSVTEN T+ISSEKLMETPNE NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  PPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

XP_038881338.1 early nodulin-75-like isoform X1 [Benincasa hispida]2.2e-5977.2Show/hide
Query:  MGACATKPKVLKAEAGE--APAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV
        MGACATKPKVLKAEAGE  APAPEPSPEEVAAGTKPEN GD KA EIV DDKVDSKSRSLS+LFTDQKEG KES E EK   E+P EKQ+TT  ET KQ+
Subjt:  MGACATKPKVLKAEAGE--APAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV

Query:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN
        I PPPEEK SENNPPE EPPVSDSVTENK      K +E+PNE NK +DPK    IEDKIK E+T END P EKTESSEKPTETEKEVKVISN
Subjt:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN

XP_038881339.1 fibrous sheath CABYR-binding protein-like isoform X2 [Benincasa hispida]1.6e-5776.68Show/hide
Query:  MGACATKPKVLKAEAGE--APAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV
        MGACATKPKVLKAEAGE  APAPEPSPEEVAAGTKPEN GD KA EIV DDKVDSKSRSLS+LFTDQ EG KES E EK   E+P EKQ+TT  ET KQ+
Subjt:  MGACATKPKVLKAEAGE--APAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV

Query:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN
        I PPPEEK SENNPPE EPPVSDSVTENK      K +E+PNE NK +DPK    IEDKIK E+T END P EKTESSEKPTETEKEVKVISN
Subjt:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN

XP_038881340.1 early nodulin-75-like isoform X3 [Benincasa hispida]6.0e-4969.95Show/hide
Query:  MGACATKPKVLKAEAGE--APAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV
        MGACATKPKVLKAEAGE  APAPEPSPEEVAAGTKPEN GD KA EIV DDK               KEG KES E EK   E+P EKQ+TT  ET KQ+
Subjt:  MGACATKPKVLKAEAGE--APAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV

Query:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN
        I PPPEEK SENNPPE EPPVSDSVTENK      K +E+PNE NK +DPK    IEDKIK E+T END P EKTESSEKPTETEKEVKVISN
Subjt:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPK----IEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein5.9e-3462.7Show/hide
Query:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQVI
        MGACATKPK LKAE+G+A      PEE+ A TKP++ GDEKA EI V DDKVDSK  SL++LF  QKEG+KE  E+      DP EKQET   ETEKQ I
Subjt:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQVI

Query:  NPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKV
        NP PEEK SENNPP  EP VSDSVTENKT+      METP+E            IKVE+T END P EKTES+EKPTETEKEVKV
Subjt:  NPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKV

A0A1S3B2F3 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X23.2e-4065.59Show/hide
Query:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQVIN
        MGACATKPK +KAE+GEA      PEE+ A TKP++ GDEKA EIV DD              D+KEG+KE  E       DP EKQET   ETEKQ I+
Subjt:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQVIN

Query:  PPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        P PEEK SENNPP  EP VSDSVTEN T+ISSEKLMETPNE NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  PPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X14.6e-4771.81Show/hide
Query:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLF-TDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV
        MGACATKPK +KAE+GEA      PEE+ A TKP++ GDEKA EI V DDKVDSK RSLSNLF  DQKEG+KE  E       DP EKQET   ETEKQ 
Subjt:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLF-TDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV

Query:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        I+P PEEK SENNPP  EP VSDSVTEN T+ISSEKLMETPNE NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X14.6e-4771.81Show/hide
Query:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLF-TDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV
        MGACATKPK +KAE+GEA      PEE+ A TKP++ GDEKA EI V DDKVDSK RSLSNLF  DQKEG+KE  E       DP EKQET   ETEKQ 
Subjt:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEI-VHDDKVDSKSRSLSNLF-TDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQV

Query:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS
        I+P PEEK SENNPP  EP VSDSVTEN T+ISSEKLMETPNE NK  DPK EDKIKVE+T END P EKTESSEKPTETEKEVKVI+
Subjt:  INPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVIS

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 13.5e-2652.97Show/hide
Query:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPE---NDG--DEKAAEIVHDDKVDSKSRSLSNLFTDQK--------EGSKESKENEKAGAEDPSEK-
        MGACATKPKVLK ++G+APAP P+PE     T PE    DG  D +  EIV +DKVDSK R LS+LF DQ+        E  +   E+EK     P EK 
Subjt:  MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPE---NDG--DEKAAEIVHDDKVDSKSRSLSNLFTDQK--------EGSKESKENEKAGAEDPSEK-

Query:  QETTAHETEKQVINPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEV-KVI
         ET   ETEK+ INPP EEK SE NPPE EPPVSDSVTEN                       IE  IKVE+ +EN PP EKTES EKPTETE+ V KVI
Subjt:  QETTAHETEKQVINPPPEEKRSENNPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEV-KVI

Query:  SN
        SN
Subjt:  SN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCTACTAAGCCAAAGGTTCTGAAGGCGGAGGCCGGCGAGGCTCCGGCACCGGAGCCTTCTCCGGAGGAGGTGGCGGCCGGAACTAAACCGGAGAATGA
CGGTGATGAGAAGGCCGCGGAGATCGTCCATGATGACAAGGTGGATTCTAAGTCACGTTCTCTTAGTAATTTGTTCACCGATCAGAAAGAAGGAAGCAAGGAGTCCAAAG
AAAACGAGAAGGCGGGAGCAGAAGATCCATCGGAGAAACAAGAGACCACCGCACATGAAACTGAAAAGCAAGTAATAAACCCACCGCCGGAGGAGAAGCGATCGGAAAAC
AACCCACCGGAGTCGGAGCCACCAGTTTCCGACTCTGTTACAGAGAACAAAACTATTATCTCATCAGAGAAACTAATGGAAACCCCAAACGAACCAAACAAACACAATGA
CCCAAAAATTGAAGACAAAATCAAAGTGGAAATTACCAATGAAAATGATCCTCCTCTTGAGAAGACAGAGTCATCGGAGAAACCAACCGAAACAGAGAAGGAAGTGAAGG
TAATTAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
AATAATAAACAATTTACAGCCTGTGGGTATACAATTTCATATTCATATATATTTTTTTTGTACATATATACGTTCTAAGCATAAATGTTTCAGTTTTGGTTTATTTTTAA
TAATTAAAAATTTTGCATCTTCATTGTTTCTGACCAATTGTCCGAATCCCAAACTGCCGAAATCCCTCTTTATAAATTATTACACCCATTTTCTCTCTGCTTCTCACTTT
CATTTCACTCAAAGAGAGAGAGAGGAAAAAAAAAAAAAAAGAAAGGATGGGAGCTTGTGCTACTAAGCCAAAGGTTCTGAAGGCGGAGGCCGGCGAGGCTCCGGCACCGG
AGCCTTCTCCGGAGGAGGTGGCGGCCGGAACTAAACCGGAGAATGACGGTGATGAGAAGGCCGCGGAGATCGTCCATGATGACAAGGTGGATTCTAAGTCACGTTCTCTT
AGTAATTTGTTCACCGATCAGAAAGAAGGAAGCAAGGAGTCCAAAGAAAACGAGAAGGCGGGAGCAGAAGATCCATCGGAGAAACAAGAGACCACCGCACATGAAACTGA
AAAGCAAGTAATAAACCCACCGCCGGAGGAGAAGCGATCGGAAAACAACCCACCGGAGTCGGAGCCACCAGTTTCCGACTCTGTTACAGAGAACAAAACTATTATCTCAT
CAGAGAAACTAATGGAAACCCCAAACGAACCAAACAAACACAATGACCCAAAAATTGAAGACAAAATCAAAGTGGAAATTACCAATGAAAATGATCCTCCTCTTGAGAAG
ACAGAGTCATCGGAGAAACCAACCGAAACAGAGAAGGAAGTGAAGGTAATTAGCAATTAAGAAATAATTTAAAAAAAAAAAAAAAAGAATCTTTAATTAATTAGCAGAGG
AACTAATATCGAATTGTTTCATTTTCCGTCCTCTTTTTTTTGGTTGTTATGGAGAAAAATACACACCTCCTTTTGTTGTTTGTGTTTCATTTTTCATAAGCCAAAGATTA
AATTTATCGCATCTCAAAGTTTTTGGTTCATCAATAATTTATTAACATAATATTCATTAATATTATGTTTTTGTTTAAACTAATATCATTTATTTTTTAATTTATATTGA
TTTTAACTTGTTCGCCTTCTATAAATTTTTAAACCCATTAACTAGAGAAGTGTTAAACTATTGAGATAATTAATTTAACTCATAGTTTTATTTTAGCTTGATTTTGCTAC
GTACATCAATGAGATGTTTATGTATTTTTTTTTTCCTTTTTGCGTTCGATGATTGTAGACGATAGGCAGGCAATTGAAAAAAATGATATTATTATTGTCTTATATATTCA
ATAATCTGACATTTTATTAACGTAATATTGTTAGATTTGATTAAATTTAAAAAGATATCATTATTTATGCCTATATACCATATGATACAGAAGTAGATAAATGTGAATTT
TGGTGAAGTGGACAATGTAGATATATGAGAAATGTTTTGTTCTAACACTAATTATGTACATCCTTAACTTATCTAAACGAACTCCATCTAGATACCTTTACATCTCTATC
ATCCATCTTGATAGCATTTGAACTTGTTAGTGTAATCTAAAATGATCTAACTTAGAACTAGTGTATTTTAATGATTCTAAAAACAATCAAAACTCATGTATTAAACGATC
CAACTAAAACGTTACAAATACTGGAATTCATTCATATTTCTTCATGATATATTAATTATATAGTCCCCAACCAAACAAATTCATTCTTATTAACTATGCAATACCAATTC
AAAGATATGAACAAAAGTTGAGTCCTTGAATCAAAATATGTTCCCATCTCTTATGAAACACACACTCTAATCCAAGATCTTTCCATACTTTTAATGGCACTCAAGCTTAT
GAAGAAATGGTTGCAACTTAATCTTAGTCTTTAAATGCATTATGGCTCTCAAATGACCTAAGAACCCCACCTCCAAGTGCGATATATTATTATTCAATCTTAAAATAACC
CAATAATTCCACCCCTTACCCTTTATGCACTCTAACCTCTAAATAAACCCTCTTTCTTCACACTTCTAATTCACTAAATATATAATGCATTCTAACACATAAGCAAACTC
AAGCTGACCTTTTCATATTTATGAACAAATGGATCTTATATTATACATATTTACAACTTCTAGAAACAATTTAAATTCAACACAA
Protein sequenceShow/hide protein sequence
MGACATKPKVLKAEAGEAPAPEPSPEEVAAGTKPENDGDEKAAEIVHDDKVDSKSRSLSNLFTDQKEGSKESKENEKAGAEDPSEKQETTAHETEKQVINPPPEEKRSEN
NPPESEPPVSDSVTENKTIISSEKLMETPNEPNKHNDPKIEDKIKVEITNENDPPLEKTESSEKPTETEKEVKVISN