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Clc01G15570 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15570
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:28340307..28341065
RNA-Seq ExpressionClc01G15570
SyntenyClc01G15570
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025567.1 hypothetical protein E6C27_scaffold253G00560 [Cucumis melo var. makuwa]4.6e-3876.47Show/hide
Query:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKD--HGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHH--SI
        MEEESSSSRNSEEVL AAQQLMQLSN DDNSSNV VVV  K NK       KKD   GGG EEEVDQKRCQIESS+WLKIEEIFGK DE  CCDHH  SI
Subjt:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKD--HGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHH--SI

Query:  I-SRPKKRRFRSIESIYMNTKPININGRFSANTIVG
        I SRPKKRRFRSI+SIYM TKP+  NGRFS  T+VG
Subjt:  I-SRPKKRRFRSIESIYMNTKPININGRFSANTIVG

KAG6595108.1 hypothetical protein SDJN03_11661, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2866.17Show/hide
Query:  MEEESSS-SRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG--EEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSII
        MEEESSS SRNSEEVLDAAQQL+QLSN+DD+SSN   VV  +N K     K K+D GG G  EEEVDQKRCQIE+S+  KIEEIFGKDD+ D  +    I
Subjt:  MEEESSS-SRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG--EEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSII

Query:  SRPKKRRFRSIESIYMNTKPININGRFSANTIV
         RP KRRFRSI+SIYMNTKP+ +N RFS   IV
Subjt:  SRPKKRRFRSIESIYMNTKPININGRFSANTIV

KGN48398.1 hypothetical protein Csa_004350 [Cucumis sativus]4.3e-2876.52Show/hide
Query:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG---EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSI
        MEEESSSS NSEEVL AAQQLMQLSN DDNSSNV VVV     K N KK    D GGGG   EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS 
Subjt:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG---EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSI

Query:  I--SRPKKRRFRSIE
        I  SRPKKRRFRSI+
Subjt:  I--SRPKKRRFRSIE

XP_022133223.1 uncharacterized protein LOC111005872 [Momordica charantia]1.6e-3066.67Show/hide
Query:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRP
        MEEESS SRN EEVL AAQQLMQLSN+DD+SSNV      KNNK       K+  G GGEEEVDQKRCQIE+S+W KIEEIFGK++E+   D +S I RP
Subjt:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRP

Query:  KKR--RFRSIESIYMNTKPININGRFSANTIV
        KKR  RFRSI+SIYM TKPI IN RFS N I+
Subjt:  KKR--RFRSIESIYMNTKPININGRFSANTIV

XP_031742655.1 uncharacterized protein LOC116404425 [Cucumis sativus]1.1e-3675.91Show/hide
Query:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG---EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSI
        MEEESSSS NSEEVL AAQQLMQLSN DDNSSNV VVV     K N KK    D GGGG   EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS 
Subjt:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG---EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSI

Query:  I--SRPKKRRFRSIESIYMNTKPININGRFSANTIVG
        I  SRPKKRRFRSI+SIYM TKPI  NGRFS  T+VG
Subjt:  I--SRPKKRRFRSIESIYMNTKPININGRFSANTIVG

TrEMBL top hitse value%identityAlignment
A0A0A0KFU1 Uncharacterized protein2.1e-2876.52Show/hide
Query:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG---EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSI
        MEEESSSS NSEEVL AAQQLMQLSN DDNSSNV VVV     K N KK    D GGGG   EEEVDQKRCQIESSVWLKIEEIFGKD+E D CC HHS 
Subjt:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGG---EEEVDQKRCQIESSVWLKIEEIFGKDDEKD-CCDHHSI

Query:  I--SRPKKRRFRSIE
        I  SRPKKRRFRSI+
Subjt:  I--SRPKKRRFRSIE

A0A5A7SLI9 Uncharacterized protein2.2e-3876.47Show/hide
Query:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKD--HGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHH--SI
        MEEESSSSRNSEEVL AAQQLMQLSN DDNSSNV VVV  K NK       KKD   GGG EEEVDQKRCQIESS+WLKIEEIFGK DE  CCDHH  SI
Subjt:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKD--HGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHH--SI

Query:  I-SRPKKRRFRSIESIYMNTKPININGRFSANTIVG
        I SRPKKRRFRSI+SIYM TKP+  NGRFS  T+VG
Subjt:  I-SRPKKRRFRSIESIYMNTKPININGRFSANTIVG

A0A6J1BYI0 uncharacterized protein LOC1110058727.7e-3166.67Show/hide
Query:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRP
        MEEESS SRN EEVL AAQQLMQLSN+DD+SSNV      KNNK       K+  G GGEEEVDQKRCQIE+S+W KIEEIFGK++E+   D +S I RP
Subjt:  MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRP

Query:  KKR--RFRSIESIYMNTKPININGRFSANTIV
        KKR  RFRSI+SIYM TKPI IN RFS N I+
Subjt:  KKR--RFRSIESIYMNTKPININGRFSANTIV

A0A6J1GFL5 uncharacterized protein LOC1114537262.0e-2363.78Show/hide
Query:  NSEEVLDAAQQLMQLS----NDDDN-SSNVAVVVPTKNNKNNNKKKMKKDHG-----GGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISR
        +SEEVL AAQ LMQLS    +DDDN SSNV V V    N     KK+KK HG     GG EEEVDQKR QIE+S+WLKIEEIFGKDDE+   D +S I R
Subjt:  NSEEVLDAAQQLMQLS----NDDDN-SSNVAVVVPTKNNKNNNKKKMKKDHG-----GGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISR

Query:  PKKRRFRSIESIYMNTKPININGRFSA
        PKKRRFRS++SIY+ TKPI  NGRF A
Subjt:  PKKRRFRSIESIYMNTKPININGRFSA

A0A6J5V3C5 Uncharacterized protein1.3e-0946.79Show/hide
Query:  SEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIES
        +E  L AAQQLMQLS D+DN++N +    +++NKN         H G   EEVDQ R  I   +W KIEEIFGK+++ D         RPKKRR+RS+ S
Subjt:  SEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIES

Query:  IYMNTKPIN
        IY+ +KP+N
Subjt:  IYMNTKPIN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGTAGCAATGTCGCCGTCGT
CGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATGCCAAATCGAGTCGTCAG
TTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGATTCCGATCCATTGAAAGC
ATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAG
mRNA sequenceShow/hide mRNA sequence
TTTTTTTTTGAGTTTTAATGGAAGAAGAATCGTCCAGTTCGCGTAATTCGGAGGAGGTATTGGATGCGGCGCAGCAGTTGATGCAGCTGAGCAACGACGACGACAATAGT
AGCAATGTCGCCGTCGTCGTCCCAACGAAGAACAACAAGAACAATAACAAGAAAAAGATGAAAAAGGATCACGGTGGTGGCGGCGAGGAGGAGGTTGATCAAAAGAGATG
CCAAATCGAGTCGTCAGTTTGGTTGAAAATTGAAGAGATTTTTGGGAAAGATGATGAGAAAGATTGTTGTGATCATCATTCTATTATTTCTCGTCCTAAGAAGAGACGAT
TCCGATCCATTGAAAGCATATATATGAACACTAAACCCATCAATATTAACGGTAGATTCTCCGCAAATACCATCGTCGGGTGTTGGACACGAAGATGGTGGCAGTAGCGA
TGGCGATGGATCAACCCGCACCAGCATAATCCTATGGTTAAAGTACTATCACTACCCTTTGTTATGTTTTGAAATTTTTTAACTCATTGAATTATGTTCGTGTGGAAAAT
TATAAACTATATATATATATATATATTGTTAATTTTGAATATGAAAGCTTGGAAATTAGTGGTAGAATTGTACATTTTGCCTTCCTGCTTCTTCCTATGCAATGTCATTG
GAAGTCGAAAAGAGATGAAAATTATAGTGAATGAATTTAAACTTTATGCTTTTTATTTCAATTATCAATCTTTGCATTTCATTCTTGCCTATTTAATAT
Protein sequenceShow/hide protein sequence
MEEESSSSRNSEEVLDAAQQLMQLSNDDDNSSNVAVVVPTKNNKNNNKKKMKKDHGGGGEEEVDQKRCQIESSVWLKIEEIFGKDDEKDCCDHHSIISRPKKRRFRSIES
IYMNTKPININGRFSANTIVGCWTRRWWQ