; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G15630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionEncodes a root meristem growth factor, Belongs to a family of functionally redundant ous peptides that are secreted, putative
Genome locationClcChr01:28401629..28402987
RNA-Seq ExpressionClc01G15630
SyntenyClc01G15630
Gene Ontology termsGO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR039337 - Protein GOLVEN 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2094320.1 hypothetical protein ES319_A02G149100v1 [Gossypium barbadense]6.2e-0540.85Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C++L+  A  L  F STT T RN+    + +     ++L   K+ G+   S DEL +MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

KAG6604255.1 hypothetical protein SDJN03_04864, partial [Cucurbita argyrosperma subsp. sororia]3.1e-2070.67Show/hide
Query:  MAMNCRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        MA+NCRFLVFVAL LL FASTTVTGR+MR + M+E +ERP+DL+VH NK KK + SD+LV MDY PA +RPPIHN
Subjt:  MAMNCRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

KJB18361.1 hypothetical protein B456_003G048600 [Gossypium raimondii]8.1e-0542.25Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C+ L+  A  L  F STT T RN+      +     ++L   K+ G+   S DELV+MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

MBA0677939.1 hypothetical protein [Gossypium aridum]6.2e-0542.25Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C+ L+  A  L  F STT T RN+      +     ++L   K+ G+   S DELV+MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

MBA0761107.1 hypothetical protein [Gossypium trilobum]6.2e-0542.25Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C+ L+  A  L  F STT T RN+      +     ++L   K+ G+   S DELV+MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

TrEMBL top hitse value%identityAlignment
A0A0D2QNE0 Uncharacterized protein3.9e-0542.25Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C+ L+  A  L  F STT T RN+      +     ++L   K+ G+   S DELV+MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

A0A5J5WPP8 Uncharacterized protein3.0e-0540.85Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C++L+  A  L  F STT T RN+    + +     ++L   K+ G+   S DEL +MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

A0A7J8WTP6 Uncharacterized protein3.0e-0542.25Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C+ L+  A  L  F STT T RN+      +     ++L   K+ G+   S DELV+MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

A0A7J9DK90 Uncharacterized protein3.0e-0542.25Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C+ L+  A  L  F STT T RN+      +     ++L   K+ G+   S DELV+MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

A0A7J9IR72 Uncharacterized protein3.9e-0542.25Show/hide
Query:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN
        C+ L+  A  L  F STT T RN+      +     ++L   K+ G+   S DELV+MDY PA+R+PPIHN
Subjt:  CRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAATTGCAGATTTCTTGTGTTTGTGGCTTTGCTTCTGCTGCATTTTGCTTCAACCACAGTAACAGGAAGAAATATGAGAGGTTTGTTAATGAAAGAAGCAGA
AGAAAGGCCAAAAGATCTTATAGTGCATAAAAATAAAGGGAAGAAGACGCAAAGCAGCGATGAGTTGGTGGCAATGGATTACAATCCTGCTTCAAGGAGACCTCCAATCC
ACAACTAA
mRNA sequenceShow/hide mRNA sequence
TCTATTTCCCCCTTTTTTTCTCCATCTAATTTCATTTCCATACCCTTCCTCTTTCCCCCTTTGTCTTCAACGGACGAACATAATGCACGACCCACTTCGGTACGACATTG
CAGCCCACAGATGCCTGCTCGAATAGCGTGCTAATACTTTTGACAACGTTTTTTTATTTTTTTTTATTTTTTTTTATTTTACTTTTAGCAACACATCTTAGTGAATTTTC
TTGTAGTAAACCGACATCAATAATTATAAAATGAAGCTTAACAAAGAGTTTTTTCAACGGAAATTCAAAACTGCAAATCTCTTGGTCGCTAATATATTTGTATGTCAGTT
AAGCTATGCTGAGAGATAAGAATATATGCAAACGAGTAAACATTAGAATTTATCATGACTCATGAAATATAAACGGAGATAATTGAGAGGAAAAATGGGATAACCTCTAA
AATGACCTATAATTGTAGAGCCTTGTGTTACAGCAAGAGCCAATCCTTTTCATCCCAAGAGAGCATTGATAAGGACTCAAACACACCATTATCTCTTTCAAGTAGTAATT
ACACTGTTTTACATCACAGTCCATTGCTCCACATGTCTACAAAGCCTTCAAAGCTTCCATGGCATCGCCTAAACACATCCATATAAAAGGCACTCAAAACTATGTGCAAT
TTGCTCTTATTGTGGAAGAAACATAGCCCATCTAAACAGTATAGAGTTTGAGATGGCTATGAATTGCAGATTTCTTGTGTTTGTGGCTTTGCTTCTGCTGCATTTTGCTT
CAACCACAGTAACAGGAAGAAATATGAGAGGTTTGTTAATGAAAGAAGCAGAAGAAAGGCCAAAAGATCTTATAGTGCATAAAAATAAAGGGAAGAAGACGCAAAGCAGC
GATGAGTTGGTGGCAATGGATTACAATCCTGCTTCAAGGAGACCTCCAATCCACAACTAAATAGTTATAGCGTTTGTGCCTGCTACTACACAAATGAATGTTATGCCCCC
TAACTTTATACTAGAAGACCCCTCAAATTTAATTTACAATTCATTCTCACTTATGTTTTTTGTTTGTAATTTGCAATCCCTGCTTGGTTCAAAAACCTATATATGTATGT
ACATATATAATATGAATAATTTCAAGGCTACCGTTAAACTTAACTTTCAAATATAAAAAAACCATCCTCACCATCAGTTTTTGT
Protein sequenceShow/hide protein sequence
MAMNCRFLVFVALLLLHFASTTVTGRNMRGLLMKEAEERPKDLIVHKNKGKKTQSSDELVAMDYNPASRRPPIHN