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Clc01G15840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:28605663..28607148
RNA-Seq ExpressionClc01G15840
SyntenyClc01G15840
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034399.1 hypothetical protein SDJN02_04127 [Cucurbita argyrosperma subsp. argyrosperma]2.4e-5884.93Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF
        MEI N KTRSRLLL+  I MLHVASCFA+ NKAPERPSFGNFIQETVAILKKSHP+ WDK+K LIHQMQLQFFPPNLDFRSSDE+KGVVDEVK+AVEKSF
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF

Query:  GASKDAVEESAKSVAKVMEEAVDKVKENLV----DKDKAKHSHDEL
        GASKDAV ESA+S AKVMEEAVDKVKENLV    DKDK KHSHDEL
Subjt:  GASKDAVEESAKSVAKVMEEAVDKVKENLV----DKDKAKHSHDEL

XP_022950287.1 uncharacterized protein LOC111453420 [Cucurbita moschata]8.3e-5985.62Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF
        MEI N KTRSRLLL+  ILMLHVASCFA+ NKAPERPSFGNFIQETVAILKKSHP+ WDK+K LIHQMQLQFFPPNLDFRSSDE+KGVVDEVK+AVEKSF
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF

Query:  GASKDAVEESAKSVAKVMEEAVDKVKENLV----DKDKAKHSHDEL
        GASKDAV ESA+S AKVMEEAVDKVKENLV    DKDK KHSHDEL
Subjt:  GASKDAVEESAKSVAKVMEEAVDKVKENLV----DKDKAKHSHDEL

XP_022977956.1 uncharacterized protein LOC111478091 [Cucurbita maxima]6.4e-5984.46Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF
        MEI N KTRSRLLL+  +LMLHVASCFA+ NKAPERPSFGNFIQETVAILKKSHP+ WDK+K LIHQMQLQFFPPNLDFRSSDE+KGVVDEVK+AVEKSF
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF

Query:  GASKDAVEESAKSVAKVMEEAVDKVKENLVDKDKA------KHSHDEL
        GASKDAV ESAKS AKVMEEAVDKVKENLVDKDK       KHSHDEL
Subjt:  GASKDAVEESAKSVAKVMEEAVDKVKENLVDKDKA------KHSHDEL

XP_023544688.1 uncharacterized protein LOC111804199 [Cucurbita pepo subsp. pepo]2.2e-5987.5Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF
        MEI N KTRSRLLL+  ILMLHVASCFA+ NKAPERPSFGNFIQETVAILKKSHP+ WDK+K LIHQMQLQFFPPNLDFRSSDE+KGVVDEVK+AVEKSF
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF

Query:  GASKDAVEESAKSVAKVMEEAVDKVKENLV--DKDKAKHSHDEL
        GASKDAV ESAKS AKVMEEAVDKVKENLV  DKDK KHSHDEL
Subjt:  GASKDAVEESAKSVAKVMEEAVDKVKENLV--DKDKAKHSHDEL

XP_038881383.1 uncharacterized protein LOC120072918 [Benincasa hispida]5.2e-6190.14Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF
        MEICNAK +SRLLLMLLILMLHVASCFADSN+APERPSFGNFIQETVAI KKSH T WDKIKSLIHQMQLQFFPPNLDFRS DE KG+VDEVK+AVEKSF
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF

Query:  GASKDAVEESAKSVAKVMEEAVDKVKENLVDKDKAKHSHDEL
        GASKDAVE SAKS AKVMEEAVDKVKENLVDKDK K SHDEL
Subjt:  GASKDAVEESAKSVAKVMEEAVDKVKENLVDKDKAKHSHDEL

TrEMBL top hitse value%identityAlignment
A0A0A0KFX9 Uncharacterized protein3.2e-5686.11Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESK-GVVDEVKDAVEKS
        MEICNA+TRS LLL+LLILMLHVASCFADSN APERPSF NFIQETVAILKKSH T  +KIKSLIHQMQLQFFPPNLDFRSSDE+K GVVDE+K+AVEKS
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESK-GVVDEVKDAVEKS

Query:  FGASKDAVEESAKSVAKVMEEAVDKVKENLVD-KDKAKHSHDEL
        FGASKDAVEESAKS AKVMEEAVDKVKENL D KD+ K+ HDEL
Subjt:  FGASKDAVEESAKSVAKVMEEAVDKVKENLVD-KDKAKHSHDEL

A0A1S3B154 uncharacterized protein LOC1034846925.1e-5484.72Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESK-GVVDEVKDAVEKS
        MEI +A+T SRLLL+LLILMLHVASCFADSNKAPERPSF NFIQETVAILKKSH T  DKI+S+IHQMQ QFFPPNLDFRSSDE+K GVVDEVK+AVEKS
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESK-GVVDEVKDAVEKS

Query:  FGASKDAVEESAKSVAKVMEEAVDKVKENLVD-KDKAKHSHDEL
        F  SKDAVEESAKS AKVMEEAVDKVKENLVD KDK K+ HDEL
Subjt:  FGASKDAVEESAKSVAKVMEEAVDKVKENLVD-KDKAKHSHDEL

A0A5D3CLZ9 Uncharacterized protein5.1e-5484.72Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESK-GVVDEVKDAVEKS
        MEI +A+T SRLLL+LLILMLHVASCFADSNKAPERPSF NFIQETVAILKKSH T  DKI+S+IHQMQ QFFPPNLDFRSSDE+K GVVDEVK+AVEKS
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESK-GVVDEVKDAVEKS

Query:  FGASKDAVEESAKSVAKVMEEAVDKVKENLVD-KDKAKHSHDEL
        F  SKDAVEESAKS AKVMEEAVDKVKENLVD KDK K+ HDEL
Subjt:  FGASKDAVEESAKSVAKVMEEAVDKVKENLVD-KDKAKHSHDEL

A0A6J1GEE2 uncharacterized protein LOC1114534204.0e-5985.62Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF
        MEI N KTRSRLLL+  ILMLHVASCFA+ NKAPERPSFGNFIQETVAILKKSHP+ WDK+K LIHQMQLQFFPPNLDFRSSDE+KGVVDEVK+AVEKSF
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF

Query:  GASKDAVEESAKSVAKVMEEAVDKVKENLV----DKDKAKHSHDEL
        GASKDAV ESA+S AKVMEEAVDKVKENLV    DKDK KHSHDEL
Subjt:  GASKDAVEESAKSVAKVMEEAVDKVKENLV----DKDKAKHSHDEL

A0A6J1ILF3 uncharacterized protein LOC1114780913.1e-5984.46Show/hide
Query:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF
        MEI N KTRSRLLL+  +LMLHVASCFA+ NKAPERPSFGNFIQETVAILKKSHP+ WDK+K LIHQMQLQFFPPNLDFRSSDE+KGVVDEVK+AVEKSF
Subjt:  MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSF

Query:  GASKDAVEESAKSVAKVMEEAVDKVKENLVDKDKA------KHSHDEL
        GASKDAV ESAKS AKVMEEAVDKVKENLVDKDK       KHSHDEL
Subjt:  GASKDAVEESAKSVAKVMEEAVDKVKENLVDKDKA------KHSHDEL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16850.1 unknown protein3.5e-0731.93Show/hide
Query:  LLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFR-SSDESKGVVDEVKDAVEKSFGASKDAVEES
        +   L +L ++V S   DS +A   PS        +  +K+S    W K++  + + Q  FFPPN  F   +D   G  + +K+A  +SF  SK  VEE+
Subjt:  LLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFR-SSDESKGVVDEVKDAVEKSFGASKDAVEES

Query:  AKSVAKVMEEAVDKVKENL
        A+S A+V+ +  + VKE +
Subjt:  AKSVAKVMEEAVDKVKENL

AT5G64820.1 unknown protein5.3e-1130.6Show/hide
Query:  MLLILMLHVASCFADSNKAPERPSFGNFIQETVAIL-KKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDE-----VKDAVEKSFGASKDAVE
        +++IL+  V++  A+S+ A ++    + ++    I   K  P++W+ I+  + ++Q++ +PPNLDFRS+ +   + +E     V++A  +S   SK+A+E
Subjt:  MLLILMLHVASCFADSNKAPERPSFGNFIQETVAIL-KKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDE-----VKDAVEKSFGASKDAVE

Query:  ESAKSVAKVMEEAVDKVKENLVDKDKAKHSHDEL
        ESAK    V+ E V K  E +  +     SHDE+
Subjt:  ESAKSVAKVMEEAVDKVKENLVDKDKAKHSHDEL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATTTGCAATGCAAAAACTCGAAGCAGATTGCTTCTTATGTTGTTAATTTTAATGCTTCATGTTGCTTCATGTTTTGCAGATTCTAATAAAGCTCCCGAGAGACC
ATCTTTTGGGAACTTCATTCAAGAAACTGTTGCCATTTTGAAGAAATCTCATCCAACTACTTGGGATAAAATCAAAAGTCTCATTCACCAAATGCAGTTGCAGTTTTTTC
CTCCTAATTTGGATTTTAGGAGTAGTGATGAATCAAAGGGTGTGGTTGATGAAGTGAAAGACGCAGTGGAGAAGAGCTTTGGAGCAAGCAAAGATGCAGTTGAGGAATCT
GCTAAATCTGTAGCAAAAGTGATGGAGGAAGCAGTGGACAAGGTTAAAGAGAACCTGGTAGATAAGGACAAGGCCAAACATTCTCATGATGAGCTTTGA
mRNA sequenceShow/hide mRNA sequence
TGGGATTCCTTTTACAAAAACGCCATGGAAATTTGCAATGCAAAAACTCGAAGCAGATTGCTTCTTATGTTGTTAATTTTAATGCTTCATGTTGCTTCATGTTTTGCAGA
TTCTAATAAAGCTCCCGAGAGACCATCTTTTGGGAACTTCATTCAAGAAACTGTTGCCATTTTGAAGAAATCTCATCCAACTACTTGGGATAAAATCAAAAGTCTCATTC
ACCAAATGCAGTTGCAGTTTTTTCCTCCTAATTTGGATTTTAGGAGTAGTGATGAATCAAAGGGTGTGGTTGATGAAGTGAAAGACGCAGTGGAGAAGAGCTTTGGAGCA
AGCAAAGATGCAGTTGAGGAATCTGCTAAATCTGTAGCAAAAGTGATGGAGGAAGCAGTGGACAAGGTTAAAGAGAACCTGGTAGATAAGGACAAGGCCAAACATTCTCA
TGATGAGCTTTGATCATCTCATCTCCTCTCTGGAAGGAGATCTACCTCTGTTCTTTTTCTTCTTTTCTTTTAGAAATTTGCATTCACTCATTTAAACCAGAAAACAATAT
ATCAAACCAGATATCCAAATTGATTAGGCTTCTTGTGACAGATGATGAGGATCACTTTTGTGCCTTACCCCAGTCACTACCTTCTGGCATGAAGGATGAAGTGTATTTGC
TTTTTTTTCTTATACAATGAAATCATTGAGGAATATTTAGAAATGTATTTATTTCTTTTTAGATAAGAAACATA
Protein sequenceShow/hide protein sequence
MEICNAKTRSRLLLMLLILMLHVASCFADSNKAPERPSFGNFIQETVAILKKSHPTTWDKIKSLIHQMQLQFFPPNLDFRSSDESKGVVDEVKDAVEKSFGASKDAVEES
AKSVAKVMEEAVDKVKENLVDKDKAKHSHDEL