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Clc01G15910 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G15910
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationClcChr01:28714891..28723948
RNA-Seq ExpressionClc01G15910
SyntenyClc01G15910
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004141960.1 uncharacterized protein LOC101206523 [Cucumis sativus]1.5e-4894.95Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEEL+A AAPPTTTD FPTDNHHPYHQ+HH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

XP_008440144.1 PREDICTED: uncharacterized protein LOC103484698 isoform X2 [Cucumis melo]1.9e-4896Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPY-HQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEEL+A AAPPTTTD FPTDNHHPY HQSHHPPPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPY-HQSHHPPPTRKSILSCFNCC

XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]6.6e-4994.95Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEEL+ASAAPPTTTD FPTDNHHPYHQSHH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

XP_023545041.1 uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]2.5e-4893.94Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEEL+ASAAPPTTT+ FPTDNHHPYHQSHH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

XP_038881128.1 uncharacterized protein LOC120072730 [Benincasa hispida]6.6e-4994.95Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKR+VSRASLGNEEEL+ SAAPPTTT+ FPTDNHHPYHQSHHPPPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

TrEMBL top hitse value%identityAlignment
A0A0A0KJ83 Uncharacterized protein7.1e-4994.95Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEEL+A AAPPTTTD FPTDNHHPYHQ+HH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

A0A1S3B0G0 uncharacterized protein LOC103484698 isoform X29.3e-4996Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPY-HQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEEL+A AAPPTTTD FPTDNHHPY HQSHHPPPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPY-HQSHHPPPTRKSILSCFNCC

A0A6J1BXX7 uncharacterized protein LOC111005740 isoform X23.5e-4892.93Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKG LPDYSLDFSK+RENRKQNKRDVSRASLGNEEEL+ASA PPT TD FPT+NHHPYHQSHHPPPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

A0A6J1GFA9 uncharacterized protein LOC1114534222.7e-4892.93Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRD+SRASLGNEEEL+ASAAPPTTT+ FPTDNHHPYHQSHH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

A0A6J1IJV1 uncharacterized protein LOC1114780923.2e-4994.95Show/hide
Query:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC
        MDDRKEKTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEEL+ASAAPPTTTD FPTDNHHPYHQSHH PPTRKSILSCFNCC
Subjt:  MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCC

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown8.1e-2960.75Show/hide
Query:  DDRKEKTAPWLSVPQFGDWDQK--GQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPT---DNHHPYHQSH----HPPPTRKSI
        DDRKEK  PWLSVPQFGDWDQK  G +PDYS+DF+K+RE RKQNKRD SRASLGNEEEL+      T+T    T   +N   +  SH    H P TR+S+
Subjt:  DDRKEKTAPWLSVPQFGDWDQK--GQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPT---DNHHPYHQSH----HPPPTRKSI

Query:  LSCFNCC
         SCFNCC
Subjt:  LSCFNCC

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein1.3e-1342.31Show/hide
Query:  DRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHH-----PPPTRKSILSC
        D++ + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ S             NH   H  H      P   +K IL+ 
Subjt:  DRKEKTAPWLSVPQFGDWDQKG--QLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHH-----PPPTRKSILSC

Query:  FNCC
         NCC
Subjt:  FNCC

AT5G64850.1 FUNCTIONS IN: molecular_function unknown1.4e-2557.66Show/hide
Query:  MDDRKE-KTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEEL---------VASAAPPTTTDPFPTDNHHPYHQSHHP--PPT
        M+DRKE K +PWLSVPQFGDWDQKG   DYS+DFSK+RE RK NKRD SRASLGNEEEL         V +A P   T     +N+      HHP  P  
Subjt:  MDDRKE-KTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEEL---------VASAAPPTTTDPFPTDNHHPYHQSHHP--PPT

Query:  RKSILSCFNCC
        R+ I SCFNCC
Subjt:  RKSILSCFNCC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATAGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGCTGCCTGACTACTCGCTTGATTTCTCAAAACTTAG
GGAAAATAGGAAACAAAACAAGAGAGATGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCGTTGCCTCAGCCGCACCTCCAACCACAACAGACCCTTTCCCTACTG
ATAATCATCACCCCTATCATCAGAGTCACCACCCTCCACCAACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGACCTCTGCAGGCCCACTTATAAAACAATGGGA
GCTCTAACCAATAAAACGAAAAAAGAAAACAACACAATGGGAGCTTTTCCCTTGGCACAAATAGAAGCAACCAACCTTTCCCTTCCTTTGCCTTCCTTCTTACGTTCTTC
GTCTGATTCTGCTGTGCTACCCGACATTGATTTGATTTCGGGATTCAACGCATCTCATTCTTTTGACTCCGGTGATTGCATATTTCTTCAGACGCCGATCCTTGGCCTTC
CCTTCGTTCTGAAACCGCGAGAACTCTTTTCCCGGTCGTTTGTGGTTATCTCTGGCTTTAAAGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATGATAGGAAGGAGAAAACTGCTCCCTGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGCTGCCTGACTACTCGCTTGATTTCTCAAAACTTAG
GGAAAATAGGAAACAAAACAAGAGAGATGTGTCTCGGGCGAGTCTTGGAAATGAAGAGGAGCTCGTTGCCTCAGCCGCACCTCCAACCACAACAGACCCTTTCCCTACTG
ATAATCATCACCCCTATCATCAGAGTCACCACCCTCCACCAACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGACCTCTGCAGGCCCACTTATAAAACAATGGGA
GCTCTAACCAATAAAACGAAAAAAGAAAACAACACAATGGGAGCTTTTCCCTTGGCACAAATAGAAGCAACCAACCTTTCCCTTCCTTTGCCTTCCTTCTTACGTTCTTC
GTCTGATTCTGCTGTGCTACCCGACATTGATTTGATTTCGGGATTCAACGCATCTCATTCTTTTGACTCCGGTGATTGCATATTTCTTCAGACGCCGATCCTTGGCCTTC
CCTTCGTTCTGAAACCGCGAGAACTCTTTTCCCGGTCGTTTGTGGTTATCTCTGGCTTTAAAGGTTAA
Protein sequenceShow/hide protein sequence
MDDRKEKTAPWLSVPQFGDWDQKGQLPDYSLDFSKLRENRKQNKRDVSRASLGNEEELVASAAPPTTTDPFPTDNHHPYHQSHHPPPTRKSILSCFNCCDLCRPTYKTMG
ALTNKTKKENNTMGAFPLAQIEATNLSLPLPSFLRSSSDSAVLPDIDLISGFNASHSFDSGDCIFLQTPILGLPFVLKPRELFSRSFVVISGFKG