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Clc01G16630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G16630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:29402334..29404092
RNA-Seq ExpressionClc01G16630
SyntenyClc01G16630
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:1901371 - regulation of leaf morphogenesis (biological process)
GO:1902025 - nitrate import (biological process)
GO:2000280 - regulation of root development (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005179 - hormone activity (molecular function)
InterPro domainsIPR033250 - C-terminally encoded peptide


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR39096.1 hypothetical protein CICLE_v10027106mg [Citrus clementina]1.1e-1249.48Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH
        MAN      FFI MI SH+L  +EGR LK+ K+ L+C  C+     ++ +KP  A+ + N++A  S+  LHH  +  +GFVDAFRPTTPGHSPGVGH
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH

KAG6604188.1 Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]7.2e-2571.88Show/hide
Query:  TQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN
        T FLTYFF F+ILSHQLVLIE R LKV          + PDT KTIT  S+ Q SINN+AKN+  KLHHRIADGFVDAFRPTTPGHSPGVGHSIQN
Subjt:  TQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN

KDO79289.1 hypothetical protein CISIN_1g045305mg [Citrus sinensis]2.4e-1249.48Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH
        MAN      FFI MI SH+L  +EGR LK+ K+ L+C  C+     ++  KP  A+ + N++A  S+  LHH  +  +GFVDAFRPTTPGHSPGVGH
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH

KGN48514.1 hypothetical protein Csa_002922 [Cucumis sativus]1.1e-3378.22Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITK-PSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN
        MA T+ LTYFF+F+ILSH LV+IEGRRLKVKKNGLRCGTCMTP T KTITK   +AQKS N       NKLHHRIADG+VDAFRPTTPGHSPGVGHSIQN
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITK-PSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN

Query:  R
        R
Subjt:  R

TYK12898.1 hypothetical protein E5676_scaffold255G004920 [Cucumis melo var. makuwa]2.7e-3276.24Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKP-SDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN
        MA T+ LTYFF+F+ILSH LV+IEGRRLKV K GLRCGTCMTP T KTITK   +AQKSIN        KLHHRIADG+VDAFRPTTPGHSPGVGHSIQN
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKP-SDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A067GI40 Uncharacterized protein1.2e-1249.48Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH
        MAN      FFI MI SH+L  +EGR LK+ K+ L+C  C+     ++  KP  A+ + N++A  S+  LHH  +  +GFVDAFRPTTPGHSPGVGH
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH

A0A0A0KIB5 Uncharacterized protein5.4e-3478.22Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITK-PSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN
        MA T+ LTYFF+F+ILSH LV+IEGRRLKVKKNGLRCGTCMTP T KTITK   +AQKS N       NKLHHRIADG+VDAFRPTTPGHSPGVGHSIQN
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITK-PSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN

Query:  R
        R
Subjt:  R

A0A5D3CP07 Uncharacterized protein1.3e-3276.24Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKP-SDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN
        MA T+ LTYFF+F+ILSH LV+IEGRRLKV K GLRCGTCMTP T KTITK   +AQKSIN        KLHHRIADG+VDAFRPTTPGHSPGVGHSIQN
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKP-SDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN

Query:  R
        R
Subjt:  R

A0A7N2M1D5 Uncharacterized protein7.5e-1247.47Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN
        MAN      FF+ +IL H+L+ IEGR L  +K  L C  C++P+T    TKP     S  ++AK +         + +VDAFRPTTPGHSPGVGHSIQN
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQN

V4SPP4 Uncharacterized protein5.2e-1349.48Show/hide
Query:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH
        MAN      FFI MI SH+L  +EGR LK+ K+ L+C  C+     ++ +KP  A+ + N++A  S+  LHH  +  +GFVDAFRPTTPGHSPGVGH
Subjt:  MANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHH--RIADGFVDAFRPTTPGHSPGVGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23440.1 unknown protein2.6e-0476.19Show/hide
Query:  VDAFRPTTPGHSPGVGHSIQN
        VD FRPT PGHSPG+GHS+ N
Subjt:  VDAFRPTTPGHSPGVGHSIQN

AT3G50610.1 unknown protein9.7e-0475Show/hide
Query:  DAFRPTTPGHSPGVGHSIQN
        D F+PTTPGHSPGVGH+++N
Subjt:  DAFRPTTPGHSPGVGHSIQN

AT5G66816.1 unknown protein8.8e-0568Show/hide
Query:  ADGFVDAFRPTTPGHSPGVGHSIQN
        A G+ D F PTTPGHSPGVGH+++N
Subjt:  ADGFVDAFRPTTPGHSPGVGHSIQN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTTTTTCATGCATACTTGGACTATAAGACGTAAATATCATGGCCCAAATTCACAGCTCCAACTTTATTATTGTAACGTGCACAGCAAACTCTGTACTCTTTGTCA
CTCCTTCGAATCTTCCCTAGTGTTTGGGAATACACTCCATATTTTTTTTTTCCTCTTCCATGTTTCATGTTTCATGTCCTTTTTTTTCCCTTTTTTTTTTTTTTCTAAAG
AGATTTTTGGCTCTTCAAGACCGCAAATGAGGCCTATAAATACCCAAACTAACTCAAAGGATTGTACGTGCCATCCTTCTCTCTCGATCCACACACCTATCTTCAATTCC
ATTGTTTATTTTCCCCTCCCTTTGTGTGAAATCAAAATGGCCAATACTCAGTTTTTAACTTACTTCTTTATCTTCATGATTTTGTCTCACCAACTTGTTCTGATTGAAGG
AAGGAGGCTGAAAGTAAAGAAAAATGGGCTCCGTTGTGGGACTTGCATGACTCCCGACACTGCAAAAACCATAACCAAACCATCAGATGCACAAAAAAGCATTAATAATA
ATGCTAAAAACAGCATGAATAAGCTGCACCACAGAATTGCCGATGGCTTTGTGGATGCCTTTCGCCCCACCACCCCCGGCCATAGTCCCGGCGTTGGTCACTCCATTCAA
AACCGATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCTTTTTCATGCATACTTGGACTATAAGACGTAAATATCATGGCCCAAATTCACAGCTCCAACTTTATTATTGTAACGTGCACAGCAAACTCTGTACTCTTTGTCA
CTCCTTCGAATCTTCCCTAGTGTTTGGGAATACACTCCATATTTTTTTTTTCCTCTTCCATGTTTCATGTTTCATGTCCTTTTTTTTCCCTTTTTTTTTTTTTTCTAAAG
AGATTTTTGGCTCTTCAAGACCGCAAATGAGGCCTATAAATACCCAAACTAACTCAAAGGATTGTACGTGCCATCCTTCTCTCTCGATCCACACACCTATCTTCAATTCC
ATTGTTTATTTTCCCCTCCCTTTGTGTGAAATCAAAATGGCCAATACTCAGTTTTTAACTTACTTCTTTATCTTCATGATTTTGTCTCACCAACTTGTTCTGATTGAAGG
AAGGAGGCTGAAAGTAAAGAAAAATGGGCTCCGTTGTGGGACTTGCATGACTCCCGACACTGCAAAAACCATAACCAAACCATCAGATGCACAAAAAAGCATTAATAATA
ATGCTAAAAACAGCATGAATAAGCTGCACCACAGAATTGCCGATGGCTTTGTGGATGCCTTTCGCCCCACCACCCCCGGCCATAGTCCCGGCGTTGGTCACTCCATTCAA
AACCGATAA
Protein sequenceShow/hide protein sequence
MSFFMHTWTIRRKYHGPNSQLQLYYCNVHSKLCTLCHSFESSLVFGNTLHIFFFLFHVSCFMSFFFPFFFFSKEIFGSSRPQMRPINTQTNSKDCTCHPSLSIHTPIFNS
IVYFPLPLCEIKMANTQFLTYFFIFMILSHQLVLIEGRRLKVKKNGLRCGTCMTPDTAKTITKPSDAQKSINNNAKNSMNKLHHRIADGFVDAFRPTTPGHSPGVGHSIQ
NR