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Clc01G16640 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G16640
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprecursor of CEP3
Genome locationClcChr01:29422428..29424976
RNA-Seq ExpressionClc01G16640
SyntenyClc01G16640
Gene Ontology termsGO:0007165 - signal transduction (biological process)
GO:1901371 - regulation of leaf morphogenesis (biological process)
GO:1902025 - nitrate import (biological process)
GO:2000280 - regulation of root development (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
GO:0005179 - hormone activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6595043.1 Precursor of CEP3, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2575.9Show/hide
Query:  IYSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        I SA SRPLKTHTNHQLS       HFQFH +++ EGKG++GAVSTP+PPT AAG SSPGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  IYSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

KAG7027066.1 Precursor of CEP3, partial [Cucurbita argyrosperma subsp. argyrosperma]2.7e-2575.9Show/hide
Query:  IYSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        I SA SRPLKTHTNHQLS       HFQFH +++ EGKG++GAVSTP+PPT AAG SSPGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  IYSAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

KAG7034348.1 hypothetical protein SDJN02_04075, partial [Cucurbita argyrosperma subsp. argyrosperma]6.2e-2270.37Show/hide
Query:  SAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        S  SRPLKT TNHQL E P    HFQFH E+++EG G+    + PNPPTAAA  SSPGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  SAFSRPLKTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

KGN48516.1 hypothetical protein Csa_002724 [Cucumis sativus]2.8e-2274.7Show/hide
Query:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSN-GAVSTPNP-PTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        AFSRPL THT H QLS+T P +PHFQ H + L EGK SN  AVSTPNP P +AA +S+PGRKMDDFRPTTPGHSPGVGHSIEN
Subjt:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSN-GAVSTPNP-PTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

TYK12897.1 hypothetical protein E5676_scaffold255G004910 [Cucumis melo var. makuwa]1.6e-2276.19Show/hide
Query:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSNG-AVST--PNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        AFSRPL THT+H QLS T P +PHFQFH   + EGK SN  AVST  PNPPTAAAG S+PGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSNG-AVST--PNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

TrEMBL top hitse value%identityAlignment
A0A059AMU0 Uncharacterized protein2.5e-0543.75Show/hide
Query:  HTNHQLSETPPN---HPHFQFHAENLDEGKGSNGAVS-TPNPPTAAAGNS----SPGRKMDDFRPTTPGHSPGVGHSIEN
        H N  L + P          +  E L+E   ++ + S  P+PPTA  G +    SPGR +DDFRPT PGHSPGVGHS++N
Subjt:  HTNHQLSETPPN---HPHFQFHAENLDEGKGSNGAVS-TPNPPTAAAGNS----SPGRKMDDFRPTTPGHSPGVGHSIEN

A0A059ANL6 Uncharacterized protein5.7e-0546.07Show/hide
Query:  SRPLKTHTNHQLSETPPN----HPHFQFHAENLDEGKGSNGAVS-TPNPP------TAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        S P K    H+L E  P           H+E L+  K +N AVS TP PP       A     SPGR +DDFRPT PGHSPGVGHS++N
Subjt:  SRPLKTHTNHQLSETPPN----HPHFQFHAENLDEGKGSNGAVS-TPNPP------TAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

A0A0A0KLC0 Uncharacterized protein1.3e-2274.7Show/hide
Query:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSN-GAVSTPNP-PTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        AFSRPL THT H QLS+T P +PHFQ H + L EGK SN  AVSTPNP P +AA +S+PGRKMDDFRPTTPGHSPGVGHSIEN
Subjt:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSN-GAVSTPNP-PTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

A0A1S3VMK4 precursor of CEP39.6e-0567.5Show/hide
Query:  VSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        VS P PP+AAA    PGR +D+FRPT PGHSPGVGHS+ N
Subjt:  VSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

A0A5D3CLS2 Uncharacterized protein7.9e-2376.19Show/hide
Query:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSNG-AVST--PNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        AFSRPL THT+H QLS T P +PHFQFH   + EGK SN  AVST  PNPPTAAAG S+PGRKMDDFRPTTPGHSPGVGHSI+N
Subjt:  AFSRPLKTHTNH-QLSETPPNHPHFQFHAENLDEGKGSNG-AVST--PNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

SwissProt top hitse value%identityAlignment
O80460 Precursor of CEP32.7e-0450Show/hide
Query:  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        + G+V + +PPT     S P   +D FRPT PGHSPG+GHS+ N
Subjt:  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

Q058G9 Precursor of CEP54.6e-0440.74Show/hide
Query:  HAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        H + + + K    +   P PP + +G    G+  +DFRPTTPGHSPG+GHS+ +
Subjt:  HAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

Arabidopsis top hitse value%identityAlignment
AT2G23440.1 unknown protein1.9e-0550Show/hide
Query:  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        + G+V + +PPT     S P   +D FRPT PGHSPG+GHS+ N
Subjt:  SNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

AT3G50610.1 unknown protein9.5e-0557.14Show/hide
Query:  STPNPPTAAAGNSSPG---RKMDDFRPTTPGHSPGVGHSIEN
        ST +      GN SPG   +K DDF+PTTPGHSPGVGH+++N
Subjt:  STPNPPTAAAGNSSPG---RKMDDFRPTTPGHSPGVGHSIEN

AT5G66815.1 unknown protein3.3e-0540.74Show/hide
Query:  HAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN
        H + + + K    +   P PP + +G    G+  +DFRPTTPGHSPG+GHS+ +
Subjt:  HAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN

AT5G66816.1 unknown protein4.7e-0446.67Show/hide
Query:  PTAAAGNSSPGRKM-----------DDFRPTTPGHSPGVGHSIEN
        PT+   +   G KM           DDF PTTPGHSPGVGH+++N
Subjt:  PTAAAGNSSPGRKM-----------DDFRPTTPGHSPGVGHSIEN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTCCCTGCAATTGGTTTGGTGTCAAACACAATCCTAAATCTAATAGGGTCTCTATGCCTGCCTGACCTTGATGGATTCTTTTTGTCTCTGTCTCATCACATCGT
CTTGAGGTTGCAATTACTTCAAATACTCACTTGCCACAATTTCGACACCATCAACTCTGCTCTTTTCTCACTTTGGAGGAAGTCCATCGTTGTGGACATCCATAAGCATC
TAATGACCATTGTATGTACTCACTTGACAACTTCACCAGCACAAGCTCTTTTCTCACCTTGGAGGAAGTCTATCGTTGTGGATATTTATTCTGCCTTCAGCAGGCCATTG
AAAACCCACACAAATCACCAACTCTCTGAGACCCCTCCAAACCACCCTCATTTCCAATTCCATGCCGAAAATCTTGACGAAGGAAAAGGGTCAAACGGCGCCGTTTCTAC
TCCGAACCCTCCCACAGCAGCTGCAGGTAATTCGTCACCCGGCCGGAAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTGAGA
ACTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTCCCTGCAATTGGTTTGGTGTCAAACACAATCCTAAATCTAATAGGGTCTCTATGCCTGCCTGACCTTGATGGATTCTTTTTGTCTCTGTCTCATCACATCGT
CTTGAGGTTGCAATTACTTCAAATACTCACTTGCCACAATTTCGACACCATCAACTCTGCTCTTTTCTCACTTTGGAGGAAGTCCATCGTTGTGGACATCCATAAGCATC
TAATGACCATTGTATGTACTCACTTGACAACTTCACCAGCACAAGCTCTTTTCTCACCTTGGAGGAAGTCTATCGTTGTGGATATTTATTCTGCCTTCAGCAGGCCATTG
AAAACCCACACAAATCACCAACTCTCTGAGACCCCTCCAAACCACCCTCATTTCCAATTCCATGCCGAAAATCTTGACGAAGGAAAAGGGTCAAACGGCGCCGTTTCTAC
TCCGAACCCTCCCACAGCAGCTGCAGGTAATTCGTCACCCGGCCGGAAGATGGATGACTTCAGGCCAACCACCCCCGGCCATAGCCCTGGCGTTGGCCATTCCATTGAGA
ACTAA
Protein sequenceShow/hide protein sequence
MKLPAIGLVSNTILNLIGSLCLPDLDGFFLSLSHHIVLRLQLLQILTCHNFDTINSALFSLWRKSIVVDIHKHLMTIVCTHLTTSPAQALFSPWRKSIVVDIYSAFSRPL
KTHTNHQLSETPPNHPHFQFHAENLDEGKGSNGAVSTPNPPTAAAGNSSPGRKMDDFRPTTPGHSPGVGHSIEN