CuGenDBv2

Gene ID	Clc01G16680
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	B3 domain-containing protein
Genome location	ClcChr01:29453250..29453930
RNA-Seq Expression	Clc01G16680
Synteny	Clc01G16680
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KGN48519.1 hypothetical protein Csa_003627 [Cucumis sativus]

1.6e-53

79.73

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Query:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
        MACLDTYK +SD+KG +PPMSPRLSFSNDF+ESS++PSPTSTTN      I PNI PSDDFEFSPNPTNHTAMTAAD+LFFKGKLLPTLRDELL+  DDD
Subjt:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD

Query:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTAT---HNNNANQAKIP
        D+D A VPPK GLPKWKEFLSLKRSVVDGRCTAT    NN+ANQ+KIP
Subjt:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTAT---HNNNANQAKIP

TYK12894.1 uncharacterized protein E5676_scaffold255G004880 [Cucumis melo var. makuwa]

7.3e-51

77.03

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Query:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
        MACLDTYK +SD+KG +PPMSPRLSFSNDF+ESS++PSPT+TTN      I  N  PSDDFEFSPNPTNHTAMTAAD+LFFKGKLLPTLRDELL+   DD
Subjt:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD

Query:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP
        D+D A VPPK GLPKWKEFLSLKRSVVDGRCTAT NN   +ANQ KIP
Subjt:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP

XP_008441107.1 PREDICTED: uncharacterized protein LOC103485334 [Cucumis melo]

4.7e-50

76.35

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Query:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
        MACLDTYK +SD+KG +PPMSPRLSFSNDF+ESS++PSPT+TTN      I  N  PSDDFEFSPNPTNHTAMTAAD+LFFKGKLLPTL DELL+   DD
Subjt:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD

Query:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP
        D+D A VPPK GLPKWKEFLSLKRSVVDGRCTAT NN   +ANQ KIP
Subjt:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP

XP_022950341.1 uncharacterized protein LOC111453452 [Cucurbita moschata]

4.1e-46

68.29

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Query:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTT------NIPPNISPSDDFEFS--PNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDD
        MACLD+YK  D+KGHYPPMSPRLSFSNDF+ES H  +  + T      NIPPNIS SDDFEFS   NP+NHT MTAAD+LFFKGKLLPTLRDELLL DDD
Subjt:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTT------NIPPNISPSDDFEFS--PNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDD

Query:  DDD--DEAAVPPKGLPKWKEFLSLKRSVVDGRC--TATHNNNANQAKIP-------TSNLSMTS
        DD     + VPPKGLPKWKEFLSLKRSVVDGRC  T THN+N NQ K+P       +S++ MTS
Subjt:  DDD--DEAAVPPKGLPKWKEFLSLKRSVVDGRC--TATHNNNANQAKIP-------TSNLSMTS

XP_038882319.1 uncharacterized protein LOC120073563 [Benincasa hispida]

2.3e-57

78.26

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Query:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTT------NIPPNIS-PSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
        MACLDTYKRSD+KG YPPMSPRLSFSNDF+ESSH PSPT+T       NIPPNIS PSDDFEFS NP+NHTAMTAAD+LFFKGKLLPTLRDELLL DDDD
Subjt:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTT------NIPPNIS-PSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD

Query:  DDDEAAVPPKGLPKWKEFLSLKRSVVDGRCTATHNNNAN-QAKIP--------TSNLSMTS
        DD  AAVPPKGLP+WKEFLSLKRSVVDGRCTAT NNN N Q KIP        +S+L MTS
Subjt:  DDDEAAVPPKGLPKWKEFLSLKRSVVDGRCTATHNNNAN-QAKIP--------TSNLSMTS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIB7 Uncharacterized protein

7.6e-54

79.73

Show/hide

Query:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
        MACLDTYK +SD+KG +PPMSPRLSFSNDF+ESS++PSPTSTTN      I PNI PSDDFEFSPNPTNHTAMTAAD+LFFKGKLLPTLRDELL+  DDD
Subjt:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD

Query:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTAT---HNNNANQAKIP
        D+D A VPPK GLPKWKEFLSLKRSVVDGRCTAT    NN+ANQ+KIP
Subjt:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTAT---HNNNANQAKIP

A0A1S3B2N0 uncharacterized protein LOC103485334

2.3e-50

76.35

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Query:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
        MACLDTYK +SD+KG +PPMSPRLSFSNDF+ESS++PSPT+TTN      I  N  PSDDFEFSPNPTNHTAMTAAD+LFFKGKLLPTL DELL+   DD
Subjt:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD

Query:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP
        D+D A VPPK GLPKWKEFLSLKRSVVDGRCTAT NN   +ANQ KIP
Subjt:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP

A0A5D3CPD3 Uncharacterized protein

3.5e-51

77.03

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Query:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
        MACLDTYK +SD+KG +PPMSPRLSFSNDF+ESS++PSPT+TTN      I  N  PSDDFEFSPNPTNHTAMTAAD+LFFKGKLLPTLRDELL+   DD
Subjt:  MACLDTYK-RSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTN------IPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD

Query:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP
        D+D A VPPK GLPKWKEFLSLKRSVVDGRCTAT NN   +ANQ KIP
Subjt:  DDDEAAVPPK-GLPKWKEFLSLKRSVVDGRCTATHNN---NANQAKIP

A0A6J1GEJ6 uncharacterized protein LOC111453452

2.0e-46

68.29

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Query:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTT------NIPPNISPSDDFEFS--PNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDD
        MACLD+YK  D+KGHYPPMSPRLSFSNDF+ES H  +  + T      NIPPNIS SDDFEFS   NP+NHT MTAAD+LFFKGKLLPTLRDELLL DDD
Subjt:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTT------NIPPNISPSDDFEFS--PNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDD

Query:  DDD--DEAAVPPKGLPKWKEFLSLKRSVVDGRC--TATHNNNANQAKIP-------TSNLSMTS
        DD     + VPPKGLPKWKEFLSLKRSVVDGRC  T THN+N NQ K+P       +S++ MTS
Subjt:  DDD--DEAAVPPKGLPKWKEFLSLKRSVVDGRC--TATHNNNANQAKIP-------TSNLSMTS

A0A6J1IL61 uncharacterized protein LOC111478032

5.8e-46

67.48

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Query:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSP----TSTTNIPPNISPSDDFEFS--PNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDDD
        MACLD+YK  D+KGHYPPMSPRLSFSNDF+ES H  +     +   NIPPNIS SDDFEFS   NP+NHT MTAAD+LFFKGKLLPTLRDELLL+DDDDD
Subjt:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSP----TSTTNIPPNISPSDDFEFS--PNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDDD

Query:  DD---EAAVPPKGLPKWKEFLSLKRSVVDGRCTAT---HNNNANQAKIP-------TSNLSMT
        D     + VPPKGLPKWKEFLSLKRSVVDGRCT T    +N+ NQ K+P       +S+L MT
Subjt:  DD---EAAVPPKGLPKWKEFLSLKRSVVDGRCTAT---HNNNANQAKIP-------TSNLSMT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT3G50640.1 unknown protein

4.9e-05

31.72

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Query:  RLSFSNDFIESSHDPSPTSTTNIPPNIS---PSDDFEFSPNPTNHTAMTAADKLFFKGKLLP---------TLRDELLLRDDDD--DDDEAAVPPKGLPK
        R+SFSN+F+E   + S   + NI    S   PS DF FS       +M  AD++F KGK+LP         TL +ELL  ++    D +  ++ P  L  
Subjt:  RLSFSNDFIESSHDPSPTSTTNIPPNIS---PSDDFEFSPNPTNHTAMTAADKLFFKGKLLP---------TLRDELLLRDDDD--DDDEAAVPPKGLPK

Query:  --------WKEFLSLKRSVVDGRCTATHNNN--ANQAKIPTSNLS
                W+E L LKR+ V  + T   N    +   KI + N++
Subjt:  --------WKEFLSLKRSVVDGRCTATHNNN--ANQAKIPTSNLS

AT5G66800.1 unknown protein

1.9e-12

38.96

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Query:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTNIPP-------NISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLP---------TLRD
        MACL+ Y  +   G   PMSPR+SFSNDF+E    P  T TT   P       + S SD+FEFS   +N+T M  AD+LF KGKLLP         TLR+
Subjt:  MACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTNIPP-------NISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLP---------TLRD

Query:  ELLLRDDDDDDDEAAV------PP----------KGLPKWKEFLSLKRSVVDGR
        ELL+ +D+++    A       PP              +WK  L LKR+ V  +
Subjt:  ELLLRDDDDDDDEAAV------PP----------KGLPKWKEFLSLKRSVVDGR

Sequences

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CDS sequence

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ATGCATTATACATATATGTTGTGCCCATTCTGTGAAGAAAGTACAAGACGAATGGCTTGCTTGGACACGTACAAGAGGTCAGATGAGAAGGGACACTACCCTCCGATGAG
CCCAAGACTGTCCTTTTCCAACGACTTCATCGAATCATCCCATGATCCTTCCCCCACCAGCACCACCAATATTCCTCCAAATATTTCCCCCTCCGACGACTTCGAATTCT
CCCCAAATCCCACCAATCACACCGCCATGACTGCCGCCGACAAGCTCTTCTTCAAGGGAAAATTGTTGCCCACTCTCAGAGATGAACTTCTCCTTCGCGACGACGACGAT
GACGATGACGAGGCTGCAGTGCCCCCGAAAGGCCTACCCAAATGGAAAGAGTTTTTGAGCCTCAAGAGATCGGTTGTTGATGGGCGCTGCACCGCCACACACAACAACAA
CGCCAACCAAGCCAAAATCCCCACCTCAAATCTTTCCATGACTTCCTAG

mRNA sequence

Show/hide mRNA sequence

AACCTAAAATGTCCACAATTAGCCTAAAAAATCTTGTACACTACTAATCTGTGAAGTATGAGACTTGATGCCCAGCGTGCATATTAAAAAAATTGAAAAATAATATTAAT
GAACGTAGAATGGATCCAGAGTTGAGGGACATATAAATCCAAGCAATAATGCATTATACATATATGTTGTGCCCATTCTGTGAAGAAAGTACAAGACGAATGGCTTGCTT
GGACACGTACAAGAGGTCAGATGAGAAGGGACACTACCCTCCGATGAGCCCAAGACTGTCCTTTTCCAACGACTTCATCGAATCATCCCATGATCCTTCCCCCACCAGCA
CCACCAATATTCCTCCAAATATTTCCCCCTCCGACGACTTCGAATTCTCCCCAAATCCCACCAATCACACCGCCATGACTGCCGCCGACAAGCTCTTCTTCAAGGGAAAA
TTGTTGCCCACTCTCAGAGATGAACTTCTCCTTCGCGACGACGACGATGACGATGACGAGGCTGCAGTGCCCCCGAAAGGCCTACCCAAATGGAAAGAGTTTTTGAGCCT
CAAGAGATCGGTTGTTGATGGGCGCTGCACCGCCACACACAACAACAACGCCAACCAAGCCAAAATCCCCACCTCAAATCTTTCCATGACTTCCTAGATCCATCACTATC
TCAATTACTACTCTGCTTTTT

Protein sequence

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MHYTYMLCPFCEESTRRMACLDTYKRSDEKGHYPPMSPRLSFSNDFIESSHDPSPTSTTNIPPNISPSDDFEFSPNPTNHTAMTAADKLFFKGKLLPTLRDELLLRDDDD
DDDEAAVPPKGLPKWKEFLSLKRSVVDGRCTATHNNNANQAKIPTSNLSMTS

Clc01G16680 (gene) of Watermelon (cordophanus) v2 genome