; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G16690 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G16690
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionATP-dependent RNA helicase eIF4A isoform X2
Genome locationClcChr01:29456769..29460895
RNA-Seq ExpressionClc01G16690
SyntenyClc01G16690
Gene Ontology termsGO:0006413 - translational initiation (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12893.1 ATP-dependent RNA helicase FAL1 isoform X2 [Cucumis melo var. makuwa]1.7e-10395.63Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELD+VCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

XP_004141918.1 eukaryotic initiation factor 4A-I isoform X3 [Cucumis sativus]2.2e-10393.75Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDP EAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELD+VCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINVS
        AEMPIN+S
Subjt:  AEMPINVS

XP_008440274.1 PREDICTED: eukaryotic initiation factor 4A-I isoform X1 [Cucumis melo]1.7e-10394.71Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELD+VCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINVS
        AEMPIN+S
Subjt:  AEMPINVS

XP_031742372.1 ATP-dependent RNA helicase eIF4A isoform X1 [Cucumis sativus]4.9e-10394.2Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDP EAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELD+VCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINV
        AEMPINV
Subjt:  AEMPINV

XP_038881299.1 eukaryotic initiation factor 4A-I [Benincasa hispida]6.9e-10595.67Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        M +DPIEAFSPPSHPSS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SEDK EVEK+GEKSHMIVVTDACLPLLASGESPL+AHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINVS
        AEMPIN+S
Subjt:  AEMPINVS

TrEMBL top hitse value%identityAlignment
A0A0A0KFR9 Uncharacterized protein1.1e-10393.75Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDP EAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPM+VCCSSRDELD+VCSAVSNL YISLASLYSDLAEADR+LILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINVS
        AEMPIN+S
Subjt:  AEMPINVS

A0A1S3B0P7 eukaryotic initiation factor 4A-I isoform X18.2e-10494.71Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELD+VCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINVS
        AEMPIN+S
Subjt:  AEMPINVS

A0A1S3B1C4 ATP-dependent RNA helicase FAL1 isoform X24.1e-10395.15Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELD+VCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKE YMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

A0A5D3CLW0 ATP-dependent RNA helicase FAL1 isoform X28.2e-10495.63Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAIDPIEAFSPPSH SS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELD+VCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QKFSS+SE+KCE EK+GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEE+SGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPIN
        AEMPIN
Subjt:  AEMPIN

A0A6J1HF44 eukaryotic initiation factor 4A-I isoform X25.3e-10394.23Show/hide
Query:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ
        MAID IEAFSPPSHPSS FSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILE FRQ
Subjt:  MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQ

Query:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
        TTSRW+QK +S+S+DKCEVE+ GEKSHMIVVTDACLPLLASGESPLSAHVLINYE+PTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI
Subjt:  TTSRWNQKFSSISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVI

Query:  AEMPINVS
        AEMPIN+S
Subjt:  AEMPINVS

SwissProt top hitse value%identityAlignment
A4QVP2 ATP-dependent RNA helicase eIF4A8.7e-1024.74Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + ++++++ D+ +A R LI+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL
             +++ TD    LLA G       ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+NV+ L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL

O02494 Eukaryotic initiation factor 4A2.7e-1126.06Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        R FYV V++ ++KM+TL+ L +       +  I+ C++R  +D +   +    + + +S++ D+ + DR +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVS
             +++ TD    LLA G       ++INY++P   ETY+ R+         G+ IN V   ++V L+ IE      I EMP+ ++
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVS

Q4P331 ATP-dependent RNA helicase eIF4A1.8e-1025.26Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        + FYVAV++  +K++TL  L +          ++ C++R ++D +   +++ ++ ++++++ D+ +A R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL
             +++ TD    LLA G       ++INY++P+ +E Y+ R+         G+ IN V   +V  L+ IE+     I EMP+NV+ L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL

Q6FQQ6 ATP-dependent RNA helicase eIF4A8.7e-1025.79Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        + FYV V+  QFK + L  L D      +   ++ C++R +++ +   ++     +++S+YSDL + +R  I+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL
             +++ TD    LLA G       ++INY++PT KE Y+ R+         G+ IN +V  +V  L+ +E+     I E+P ++  L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL

Q7RV88 ATP-dependent RNA helicase eIF4A8.7e-1024.74Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        + FY+AV++ ++K++TL  L +          ++ C++R ++D +   ++   + ++++++ D+ +A R LI+++FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL
             +++ TD    LLA G       ++INY++P  +E Y+ R+         G+ IN V   +V  ++ IE+     I EMP+NV+ L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL

Arabidopsis top hitse value%identityAlignment
AT1G72730.1 DEA(D/H)-box RNA helicase family protein1.9e-0722.63Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        + FYV VD+ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN +   +   +  I+    +V+ E+P NV+ L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL

AT3G13920.1 eukaryotic translation initiation factor 4A12.4e-0723.16Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN V   +   L  I++   +V+ E+P NV+ L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL

AT3G13920.3 eukaryotic translation initiation factor 4A12.4e-0723.16Show/hide
Query:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL
        + FYV V++ ++K+ETL  L +      S   ++  ++R ++D +   + +  + ++++ + D+ +  R +I+ +FR  +SR                  
Subjt:  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFSSISEDKCEVEKL

Query:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL
             +++ TD    LLA G       ++IN+++PT+ E Y+ R+         G+ IN V   +   L  I++   +V+ E+P NV+ L
Subjt:  GEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCS--ASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVL

AT4G37020.1 BEST Arabidopsis thaliana protein match is: eukaryotic initiation factor 4A-III (TAIR:AT3G19760.1)1.5e-7366.99Show/hide
Query:  IDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT
        +D +EA S P    S+ SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRDELDAVCS++S L YISLA+LYSDLA+ +RA+++EKFRQ T
Subjt:  IDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT

Query:  SRWNQKFSSISEDKCEVEKLGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV
          WNQ+ +S+ E+  E  + G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EESSG++
Subjt:  SRWNQKFSSISEDKCEVEKLGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV

Query:  IAEMPINVS
        IAEMPIN+S
Subjt:  IAEMPINVS

AT4G37020.2 FUNCTIONS IN: molecular_function unknown3.3e-7367.31Show/hide
Query:  IDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT
        +D +EA S P    S+ SQQ HFY+AVDR QFKMET+V LL V GRRP LP++VCCSSRDELDAVCS++S L YISLA+LYSDLA+ +RA+++EKFRQ T
Subjt:  IDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTT

Query:  SRWNQKFSSISEDKCEVEKLGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV
          WNQ+ +S+ E+  E  + G++   SH++VVTD CLPLL+SGES LSA VLINYE+PTKKETY RR+TTC AS GI+INMVVGGEV TLKS+EESSG++
Subjt:  SRWNQKFSSISEDKCEVEKLGEK---SHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLV

Query:  IAEMPINV
        IAEMPINV
Subjt:  IAEMPINV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCGATCCAATTGAAGCCTTCTCGCCTCCCTCTCACCCATCTTCCCAATTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGATAGGCTCCAGTTCAAGATGGA
AACGTTAGTGGGTTTGTTGGACGTGGCCGGTCGCCGTCCGTCCTTGCCGATGATTGTGTGTTGTAGTTCTCGCGACGAGCTCGATGCTGTCTGCTCCGCTGTCTCCAACC
TCCAATACATCTCTTTGGCCTCCTTGTACAGTGACCTTGCTGAAGCAGACCGTGCACTGATTTTAGAGAAATTTCGGCAAACAACATCAAGGTGGAACCAAAAGTTCAGT
TCTATATCAGAAGACAAATGTGAGGTTGAGAAACTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTC
TGCCCATGTTTTGATAAATTATGAGATACCAACAAAGAAGGAAACGTATATGAGGCGCATGACTACCTGCTCAGCCTCAGATGGGATCTTGATCAACATGGTTGTTGGGG
GAGAAGTGGTAACTCTCAAAAGCATTGAAGAAAGTAGTGGCCTTGTTATTGCTGAGATGCCCATTAATGTAAGTGTATTATCACTACTTGCTTTGATCTTCATGTGA
mRNA sequenceShow/hide mRNA sequence
TGCAAAGTCATAAAGTCCAAAATAATTAACATTTATTGTTTTGATTATGCTTATCAGTAGCTTTAACACAATAGGTGTGCTCCAAACAATTACGATTGAATCCAAATCAA
AGAAACTTTGAAGAGACGCCTCTCTTAGCTTCATCAATTTGCTGCAAATCACAAATATTAACCTGAAATTTTCTCTTTCTCATATTTGGTAAAATCCTTATCCCGTTTTT
CCGCCATCTCTGCCGTCTGGGTTCCTTCTCCCGTTTCTGTCACCGGCCACCGCTGCTAGTAGAAGGAAGAGATTGGGGTTGTGAAAAAGGAAATTTCTATCACCATTCAA
CAAATTGGATTGAGATCTTCACCGATTTTTAATTTTTCTACGAAAGAGCTTCACCATTTGAGGAAAAGCTGAATTGGTTGGAGAAAGAACAGCAAACTAAATCATGGGAG
TGAGGAAGTGACGGTTTGGTGTTCATTGCTTTTCGAAGAAAGAAAGAAGAGGAAGGAAAAAAAAAAAAAAAAAGCAGAAATCGTGTACCCCGCATGCGAATTGGGTCAAT
AGTTTGCTTTTCCACTCCATTTTTGTCATTTCTTATTTGTTTAGCATTATTTTATTATTTAGAAGACTGCCCTAAATTTGTAATTTTTTTTAAAAAAGTTAATTATTCCT
GAACTTACTCCCATATATTTTTTGTTAAATTTAAATTGTAAATATATTTGACAAACTATAATTAGAAAATTTTGTAACATGCATAAAGACAAATTTATCTTGAAATGGGC
CTAAGTATTATTCTCCAAAATAATATCGGTGGTTTGGAATATATTTTCAAGTATTTAATTTAAAAAATAAGTTATTTTGAAATAATTATATTTATTTGACAACCACTCAA
AATGAATTTTGAAATTCATTAGTGTTTTTATTTTACATAGTTCTTATCAAAAGTGTTTAAATGAAAATGAAGTTTTGAAAAATATATATTTTTTTAAAATTAATCGAAAC
GGACCATTAAACTATTGACATTTCTTATCAAAAATATTTAAATGAAAATAAATTTTTTAAAAATATTTATTTTTTAAGCTAATCTTAACCTACTTAAAATTAAGTAAAAA
TGAAAAAAATATCAAATTATTTATAAATATAATAAAATTTTACTTTTTATTCGAATTTATACCGATAGAAAGGAAAATTTGGATATATTTATAATTATTTCTAATAGTTT
CTATTTTTGAACTTCTCTTATTATTCATTTAAATAATTTTTATAAAATATTTGGCTTAAAATATGGTCAATAAATGGTAAAATTGGTGACCAAGGTCCAAGGCAGGGGAG
GAGCGGGCGAGGTGTGTCTTCAGGAAAGATCAAACTAGGAAGCAAGCAGGCGAGAGCGCTGTGGTGCAGTGCAGCACAGGGACCATGGCAATCGATCCAATTGAAGCCTT
CTCGCCTCCCTCTCACCCATCTTCCCAATTCAGTCAACAGCGCCACTTCTATGTTGCCGTTGATAGGCTCCAGTTCAAGATGGAAACGTTAGTGGGTTTGTTGGACGTGG
CCGGTCGCCGTCCGTCCTTGCCGATGATTGTGTGTTGTAGTTCTCGCGACGAGCTCGATGCTGTCTGCTCCGCTGTCTCCAACCTCCAATACATCTCTTTGGCCTCCTTG
TACAGTGACCTTGCTGAAGCAGACCGTGCACTGATTTTAGAGAAATTTCGGCAAACAACATCAAGGTGGAACCAAAAGTTCAGTTCTATATCAGAAGACAAATGTGAGGT
TGAGAAACTTGGAGAAAAATCTCACATGATTGTAGTAACAGACGCCTGCCTTCCACTTCTTGCTTCTGGGGAGTCACCTCTTTCTGCCCATGTTTTGATAAATTATGAGA
TACCAACAAAGAAGGAAACGTATATGAGGCGCATGACTACCTGCTCAGCCTCAGATGGGATCTTGATCAACATGGTTGTTGGGGGAGAAGTGGTAACTCTCAAAAGCATT
GAAGAAAGTAGTGGCCTTGTTATTGCTGAGATGCCCATTAATGTAAGTGTATTATCACTACTTGCTTTGATCTTCATGTGA
Protein sequenceShow/hide protein sequence
MAIDPIEAFSPPSHPSSQFSQQRHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMIVCCSSRDELDAVCSAVSNLQYISLASLYSDLAEADRALILEKFRQTTSRWNQKFS
SISEDKCEVEKLGEKSHMIVVTDACLPLLASGESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVGGEVVTLKSIEESSGLVIAEMPINVSVLSLLALIFM