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Clc01G16990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G16990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionB-like cyclin
Genome locationClcChr01:29767479..29767736
RNA-Seq ExpressionClc01G16990
SyntenyClc01G16990
Gene Ontology termsGO:0007049 - cell cycle (biological process)
GO:0051301 - cell division (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12863.1 cyclin-D3-3 [Cucumis melo var. makuwa]1.8e-0879.07Show/hide
Query:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
        MALHDEPQV D+Q  HSFLLDALFCEELCC EDLP   +DEDT
Subjt:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
XP_008440318.1 PREDICTED: cyclin-D3-3 [Cucumis melo]1.8e-0879.07Show/hide
Query:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
        MALHDEPQV D+Q  HSFLLDALFCEELCC EDLP   +DEDT
Subjt:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
XP_011657878.1 cyclin-D3-3 [Cucumis sativus]4.3e-1065Show/hide
Query:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDTPVPGNSEKRPAFSRFQF
        MALHDEPQV DIQ  HSFLLDALFCEELCCHEDLP   +D+DT       K   F  F F
Subjt:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDTPVPGNSEKRPAFSRFQF
XP_038883645.1 cyclin-D3-3-like [Benincasa hispida]6.6e-1188.1Show/hide
Query:  MALHDEPQVQDIQAHSFLLDALFCEELCCHEDLPA---DEDT
        MALHDEPQVQDIQ HSFLLDALFCEELCC EDLPA   DEDT
Subjt:  MALHDEPQVQDIQAHSFLLDALFCEELCCHEDLPA---DEDT
TrEMBL top hitse value%identityAlignment
A0A0A0KJL4 B-like cyclin2.1e-1065Show/hide
Query:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDTPVPGNSEKRPAFSRFQF
        MALHDEPQV DIQ  HSFLLDALFCEELCCHEDLP   +D+DT       K   F  F F
Subjt:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDTPVPGNSEKRPAFSRFQF
A0A1S3B0E7 B-like cyclin8.7e-0979.07Show/hide
Query:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
        MALHDEPQV D+Q  HSFLLDALFCEELCC EDLP   +DEDT
Subjt:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
A0A5D3CLT1 B-like cyclin8.7e-0979.07Show/hide
Query:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
        MALHDEPQV D+Q  HSFLLDALFCEELCC EDLP   +DEDT
Subjt:  MALHDEPQVQDIQ-AHSFLLDALFCEELCCHEDLP---ADEDT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCTCCATGACGAACCCCAAGTTCAGGACATCCAAGCCCATTCCTTTCTTCTCGATGCTCTTTTCTGTGAAGAACTCTGCTGCCATGAAGACTTGCCTGCTGATGA
AGACACCCCAGTACCGGGAAACTCTGAGAAAAGACCAGCCTTTTCTCGCTTTCAATTTGGTGGAAAACGACCCACTTTCGGCGGATACCCAGCTTCACTCTCTGATTTCA
AAAGAAGAGCAAACCCACTGTTTGTTATGCTTCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTCTCCATGACGAACCCCAAGTTCAGGACATCCAAGCCCATTCCTTTCTTCTCGATGCTCTTTTCTGTGAAGAACTCTGCTGCCATGAAGACTTGCCTGCTGATGA
AGACACCCCAGTACCGGGAAACTCTGAGAAAAGACCAGCCTTTTCTCGCTTTCAATTTGGTGGAAAACGACCCACTTTCGGCGGATACCCAGCTTCACTCTCTGATTTCA
AAAGAAGAGCAAACCCACTGTTTGTTATGCTTCTATGA
Protein sequenceShow/hide protein sequence
MALHDEPQVQDIQAHSFLLDALFCEELCCHEDLPADEDTPVPGNSEKRPAFSRFQFGGKRPTFGGYPASLSDFKRRANPLFVMLL