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Clc01G17010 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G17010
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionADP-ribosylation factor
Genome locationClcChr01:29770516..29771279
RNA-Seq ExpressionClc01G17010
SyntenyClc01G17010
Gene Ontology termsGO:0006886 - intracellular protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR006689 - Small GTPase superfamily, ARF/SAR type
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK12862.1 ADP-ribosylation factor 1 [Cucumis melo var. makuwa]1.9e-3293.59Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKASSRAYKASS
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYIQATCATSGQGLYEGLDWLSSNIS KASSRA+ ASS
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKASSRAYKASS

XP_004141900.1 ADP-ribosylation factor 1 [Cucumis sativus]4.4e-2995.65Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYIQATCATSGQGLYEGLDWLSSNIS KA
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

XP_022133335.1 ADP-ribosylation factor 2-like [Momordica charantia]8.8e-3097.1Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYIQATCATSGQGLYEGLDWLSSNISNKA
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

XP_022963212.1 ADP-ribosylation factor 1-like [Cucurbita moschata]3.9e-3098.53Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK

XP_038883646.1 ADP-ribosylation factor 2-like [Benincasa hispida]2.1e-3193.24Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKASSRAY
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA S+ +
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKASSRAY

TrEMBL top hitse value%identityAlignment
A0A0A0KID8 ADP-ribosylation factor, arf2.1e-2995.65Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYIQATCATSGQGLYEGLDWLSSNIS KA
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

A0A5D3CND0 ADP-ribosylation factor 19.2e-3393.59Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKASSRAYKASS
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYIQATCATSGQGLYEGLDWLSSNIS KASSRA+ ASS
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKASSRAYKASS

A0A6J1BUS7 ADP-ribosylation factor 2-like4.3e-3097.1Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLR+RRWYIQATCATSGQGLYEGLDWLSSNISNKA
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

A0A6J1HEL2 ADP-ribosylation factor 1-like1.9e-3098.53Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK

A0A6J1KPF3 ADP-ribosylation factor 1-like1.9e-3098.53Show/hide
Query:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK
        +HELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK
Subjt:  KHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK

SwissProt top hitse value%identityAlignment
O48649 ADP-ribosylation factor 12.1e-2683.58Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NIS+KA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

P36397 ADP-ribosylation factor 14.7e-2682.09Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI++KA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

P51821 ADP-ribosylation factor 14.7e-2681.82Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+N++NK
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNK

P51823 ADP-ribosylation factor 21.2e-2683.58Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI+NKA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

Q06396 ADP-ribosylation factor 14.7e-2682.09Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI++KA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

Arabidopsis top hitse value%identityAlignment
AT1G10630.1 ADP-ribosylation factor A1F3.3e-2782.09Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI++KA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

AT2G47170.1 Ras-related small GTP-binding family protein3.3e-2782.09Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI++KA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

AT3G62290.1 ADP-ribosylation factor A1E8.8e-2883.58Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI+NKA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

AT3G62290.2 ADP-ribosylation factor A1E8.8e-2883.58Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI+NKA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA

AT3G62290.3 ADP-ribosylation factor A1E8.8e-2883.58Show/hide
Query:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA
        EL DA +LVFANKQDLPNAM  AEITDKLGLHSLR R WYIQ+TCATSG+GLYEGLDWLS+NI+NKA
Subjt:  ELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCCTTCGCATTTCTCTTGGCTTTTACGCTTCATTTTTCTTTTTCTTCTCATTCAAGCATGAACTGGTTGATGCAACTGTGCTCGTGTTTGCTAACAAGCAAGACCT
TCCAAATGCTATGACTGTTGCTGAAATCACTGATAAACTTGGCCTTCACTCACTCCGACATCGTCGCTGGTACATCCAGGCTACTTGTGCCACTTCAGGCCAAGGATTGT
ATGAAGGTCTTGACTGGCTGTCTAGCAATATCTCAAACAAGGCAAGTTCCAGAGCTTATAAGGCTTCCTCTATATTTCCCGTAAAGCATAATGGGATTCTTAGTATGAAA
AAGCAGAATATATACACTCAAAACTAA
mRNA sequenceShow/hide mRNA sequence
TTTCATGCTCCTTCGCATTTCTCTTGGCTTTTACGCTTCATTTTTCTTTTTCTTCTCATTCAAGCATGAACTGGTTGATGCAACTGTGCTCGTGTTTGCTAACAAGCAAG
ACCTTCCAAATGCTATGACTGTTGCTGAAATCACTGATAAACTTGGCCTTCACTCACTCCGACATCGTCGCTGGTACATCCAGGCTACTTGTGCCACTTCAGGCCAAGGA
TTGTATGAAGGTCTTGACTGGCTGTCTAGCAATATCTCAAACAAGGCAAGTTCCAGAGCTTATAAGGCTTCCTCTATATTTCCCGTAAAGCATAATGGGATTCTTAGTAT
GAAAAAGCAGAATATATACACTCAAAACTAACGGGTTGTTTTGTACCTTTTCTTGCAGGCCTAATCTCAGTTGTTTTGATAAACATCTTGGGGGAAAGCTCTTTAAGGTG
AAGCCAGAAGGAA
Protein sequenceShow/hide protein sequence
MLLRISLGFYASFFFFFSFKHELVDATVLVFANKQDLPNAMTVAEITDKLGLHSLRHRRWYIQATCATSGQGLYEGLDWLSSNISNKASSRAYKASSIFPVKHNGILSMK
KQNIYTQN