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Clc01G17360 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G17360
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:30061398..30061758
RNA-Seq ExpressionClc01G17360
SyntenyClc01G17360
Gene Ontology termsNA
InterPro domainsIPR026939 - ZNF706/At2g23090 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647516.1 hypothetical protein Csa_003813 [Cucumis sativus]2.4e-1881.43Show/hide
Query:  DEQSALYYLRLASLFRPLPSEGDLFFELGFQIIEVLSGFLVKMGGGNGQKAKMAREKNMEKLKAA-KGEF
        DEQ+ALY+LRLAS      SEGDLFF LGFQI +VLSGFLVKMGGGNGQK+KMAREKNMEKLKAA KGEF
Subjt:  DEQSALYYLRLASLFRPLPSEGDLFFELGFQIIEVLSGFLVKMGGGNGQKAKMAREKNMEKLKAA-KGEF
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCATTGGTCTGTGACCTGTATGCGGATGAACAAAGCGCATTGTATTATTTGCGCCTTGCTTCCTTGTTCCGGCCCCTTCCAAGCGAAGGCGATCTCTTCTTCGAATT
AGGGTTTCAGATTATTGAGGTTCTCTCGGGATTCCTCGTAAAAATGGGAGGGGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATGGAGAAGCTAAAAGCTG
CTAAGGGCGAGTTTTCTCTCTCTAATTCTTCGCCTCTATTTATCGACAATTCTTTCTTTTTTGTCGTACTTTTGTTGATTTCTGAGTGGATTTCTAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCATTGGTCTGTGACCTGTATGCGGATGAACAAAGCGCATTGTATTATTTGCGCCTTGCTTCCTTGTTCCGGCCCCTTCCAAGCGAAGGCGATCTCTTCTTCGAATT
AGGGTTTCAGATTATTGAGGTTCTCTCGGGATTCCTCGTAAAAATGGGAGGGGGGAACGGGCAGAAAGCGAAGATGGCTCGCGAGAAGAACATGGAGAAGCTAAAAGCTG
CTAAGGGCGAGTTTTCTCTCTCTAATTCTTCGCCTCTATTTATCGACAATTCTTTCTTTTTTGTCGTACTTTTGTTGATTTCTGAGTGGATTTCTAACTAA
Protein sequenceShow/hide protein sequence
MSLVCDLYADEQSALYYLRLASLFRPLPSEGDLFFELGFQIIEVLSGFLVKMGGGNGQKAKMAREKNMEKLKAAKGEFSLSNSSPLFIDNSFFFVVLLLISEWISN