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Clc01G18280 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G18280
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein BRICK 1
Genome locationClcChr01:30850369..30854614
RNA-Seq ExpressionClc01G18280
SyntenyClc01G18280
Gene Ontology termsGO:0008064 - regulation of actin polymerization or depolymerization (biological process)
GO:0048870 - cell motility (biological process)
GO:0005856 - cytoskeleton (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0031209 - SCAR complex (cellular component)
GO:0044877 - protein-containing complex binding (molecular function)
InterPro domainsIPR033378 - Protein BRICK1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022132950.1 protein BRICK 1 [Momordica charantia]4.1e-2795.89Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

XP_031742992.1 protein BRICK 1 isoform X3 [Cucumis sativus]4.1e-2795.89Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

XP_031742995.1 protein BRICK 1 isoform X7 [Cucumis sativus]4.1e-2795.89Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

XP_031742996.1 protein BRICK 1 isoform X8 [Cucumis sativus]3.1e-2794.59Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQN
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ+
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQN

XP_031742997.1 protein BRICK 1 isoform X9 [Cucumis sativus]4.1e-2795.89Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

TrEMBL top hitse value%identityAlignment
A0A0A0KG45 Protein BRICK12.0e-2795.89Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

A0A1S3B198 protein BRICK 12.0e-2795.89Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

A0A6J1BTZ0 protein BRICK 12.0e-2795.89Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISINVRRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

A0A6J1HEV8 protein BRICK 12.6e-2794.52Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

A0A6J1KN25 protein BRICK 12.6e-2794.52Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAGGI+NAVNVGIAVQADWENREFISHISIN+RRLFDFLVHF +ATTKSKLASLNEKLDTLERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

SwissProt top hitse value%identityAlignment
A2BD66 Probable protein BRICK1-B2.4e-0645.61Show/hide
Query:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        +  DW NRE+I  I+ +++++ DFL  F   + +S+LA+LNEKL TLERR+E +E +
Subjt:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

Q54X65 Protein BRICK16.4e-0747.27Show/hide
Query:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLE
        +Q DWE REFI  +SIN++++ +FL  F + +T++KL+ LNEKL  L+R+++ LE
Subjt:  VQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLE

Q84VA7 Probable protein BRICK11.3e-2381.33Show/hide
Query:  MARAG--GISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MARAG  G+ N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ F +ATTKSKLASLNEKLD LER+LE+LEVQ
Subjt:  MARAG--GISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

Q8RW98 Protein BRICK13.4e-2480.82Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        M R GG+ N VNVGIAVQADWENREFIS+IS+NVRRLFDFL+ F +ATTKSKLASLNEKLD LER+LE+LEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

Q94JY4 Protein BRICK 15.5e-2787.67Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MA+AGGI+NAVNVGIAVQADWENREFISHIS+NVRRLF+FLV F ++TTKSKLASLNEKLD LERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ

Arabidopsis top hitse value%identityAlignment
AT2G22640.1 BRICK1, putative3.9e-2887.67Show/hide
Query:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ
        MA+AGGI+NAVNVGIAVQADWENREFISHIS+NVRRLF+FLV F ++TTKSKLASLNEKLD LERRLEMLEVQ
Subjt:  MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAGAGCTGGAGGAATTAGTAACGCTGTAAACGTAGGGATAGCGGTTCAAGCTGATTGGGAGAACCGCGAATTCATCTCTCATATTTCCATCAATGTCCGTCGTCT
CTTTGATTTCCTCGTCCATTTTGGTAAGGCAACAACAAAGAGCAAGTTGGCATCTTTGAACGAGAAGCTTGATACGTTGGAGCGGCGGCTTGAAATGCTCGAAGTCCAAA
ATTTAGATTCATGTTGTGTGCTTGAACAAGGAATATGTGCTATTGTGATAAGAAGGAAAAGTATATTTGATGTCAATGCAACTAGACGACTGTGTCTGTTGAGCCTGTTG
TTGAAAATACCCCTCCAAGATCCTTGGGTCATCTCGTCCTTAAATTACCTCCACGCTTTGTCAGTCCCTCCACCATATCATCTCAACTTTCCTTCAGATAATCAGGAAAG
AGGAAGGCCAGCAGAGCTGCGAGGAACAGTTATTCTGAGAGCGTATTTAGACTTGGAATATGGATATGAAGGTGACCCTGCATCATTTGAATACGAACCTCCTAGGCTAG
AATGGCTATGGACATACGAACCAAACTATCCCAGCATAGACAAGAGCTTGCAGGCCAAGAAAAGGCAGGCATTGTGGGATGTTTCGCGGATGAAAATGAAACGTTCTTGT
ATGAATGCTGGGACAGCATCATTGGAAGAGAAAAAGAAGAGACAGACGGTAAAGATGAAGAAGCTGAGACGGTCTGTAATTCCTTGGGTATTCTCTTTAGGCTTCATGAA
CATTGTAGCCATCATAAACCCCATAACTGTGAGGACCATCAACCTTGAGAGGAACAGCTCGGGGGTTCTTGATATGTTCTTGAAATTTCTACGCATAAGAATCCAGGTCT
CAGAGAAGAATGAGTTCGAAATCTTTTTGCCCAGTCCTGAAGTTGGTTCATCGAGGAAGAGCAGTGATGGCCCATGGATGATGTCCACCCCAATTGATACTCTTCTTCGT
TCGCCACCAGACACCCCTCTTGTTCCTTCATCTCCAATATAG
mRNA sequenceShow/hide mRNA sequence
AGATGTTTAAGTTTCTTTCTATTAACTTGGAGTTAAAATTACATACATGGTATAAAAATTATAAATTGCAATATTTAATAAGCCTCGAGTCTAATTAGATGAAATTGGAA
GTTTAGGTTAGAGCTTGAGAGAGGACAAAGGGATTTTTCTTTTCCAAATTCCAAAAAGGCAAAAAAAGAAAAAAAAAAAAAATCCAGTTTTGATCGAGAGAGATATTGGT
ATGCATAATAAGTTTGGTGAAAATGGTAACCCCGGTCCACTCCACCACCACAATCAACTCGCTTTCGGCTGGTGGTTTATGCTATGCTATATTGAAATTGAGAGCTTACC
CCCTGCCCTTGAAGAATCCAAGCGATCTGCTCATCTGAGTTCGCGCCATAGATTAAATCCCACTGTGTGATGGCTAGAGCTGGAGGAATTAGTAACGCTGTAAACGTAGG
GATAGCGGTTCAAGCTGATTGGGAGAACCGCGAATTCATCTCTCATATTTCCATCAATGTCCGTCGTCTCTTTGATTTCCTCGTCCATTTTGGTAAGGCAACAACAAAGA
GCAAGTTGGCATCTTTGAACGAGAAGCTTGATACGTTGGAGCGGCGGCTTGAAATGCTCGAAGTCCAAAATTTAGATTCATGTTGTGTGCTTGAACAAGGAATATGTGCT
ATTGTGATAAGAAGGAAAAGTATATTTGATGTCAATGCAACTAGACGACTGTGTCTGTTGAGCCTGTTGTTGAAAATACCCCTCCAAGATCCTTGGGTCATCTCGTCCTT
AAATTACCTCCACGCTTTGTCAGTCCCTCCACCATATCATCTCAACTTTCCTTCAGATAATCAGGAAAGAGGAAGGCCAGCAGAGCTGCGAGGAACAGTTATTCTGAGAG
CGTATTTAGACTTGGAATATGGATATGAAGGTGACCCTGCATCATTTGAATACGAACCTCCTAGGCTAGAATGGCTATGGACATACGAACCAAACTATCCCAGCATAGAC
AAGAGCTTGCAGGCCAAGAAAAGGCAGGCATTGTGGGATGTTTCGCGGATGAAAATGAAACGTTCTTGTATGAATGCTGGGACAGCATCATTGGAAGAGAAAAAGAAGAG
ACAGACGGTAAAGATGAAGAAGCTGAGACGGTCTGTAATTCCTTGGGTATTCTCTTTAGGCTTCATGAACATTGTAGCCATCATAAACCCCATAACTGTGAGGACCATCA
ACCTTGAGAGGAACAGCTCGGGGGTTCTTGATATGTTCTTGAAATTTCTACGCATAAGAATCCAGGTCTCAGAGAAGAATGAGTTCGAAATCTTTTTGCCCAGTCCTGAA
GTTGGTTCATCGAGGAAGAGCAGTGATGGCCCATGGATGATGTCCACCCCAATTGATACTCTTCTTCGTTCGCCACCAGACACCCCTCTTGTTCCTTCATCTCCAATATA
G
Protein sequenceShow/hide protein sequence
MARAGGISNAVNVGIAVQADWENREFISHISINVRRLFDFLVHFGKATTKSKLASLNEKLDTLERRLEMLEVQNLDSCCVLEQGICAIVIRRKSIFDVNATRRLCLLSLL
LKIPLQDPWVISSLNYLHALSVPPPYHLNFPSDNQERGRPAELRGTVILRAYLDLEYGYEGDPASFEYEPPRLEWLWTYEPNYPSIDKSLQAKKRQALWDVSRMKMKRSC
MNAGTASLEEKKKRQTVKMKKLRRSVIPWVFSLGFMNIVAIINPITVRTINLERNSSGVLDMFLKFLRIRIQVSEKNEFEIFLPSPEVGSSRKSSDGPWMMSTPIDTLLR
SPPDTPLVPSSPI