; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G18730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G18730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPolyadenylate-binding protein 2-like
Genome locationClcChr01:31239583..31243442
RNA-Seq ExpressionClc01G18730
SyntenyClc01G18730
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036316.1 polyadenylate-binding protein 2-like [Cucumis melo var. makuwa]2.6e-9971.48Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        SAVSQESKEEADSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEFVEAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPYGGYGKTPRFRRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

KAG6594888.1 Polyadenylate-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia]5.6e-9468.73Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        + VSQESKEE DSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFG 
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPY GYGKTPR+RRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

XP_004143458.1 polyadenylate-binding protein 3 isoform X1 [Cucumis sativus]9.9e-9970.79Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        SAVSQESKEEADSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEFVEAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPYGGYGKTPRFRRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

XP_038882558.1 polyadenylate-binding protein 3-like isoform X1 [Benincasa hispida]2.4e-11377.55Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEIS---TAASSICLITIPHTD
        M+EEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLP SR TLDYINFEIS   T   S+ LIT+  TD
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEIS---TAASSICLITIPHTD

Query:  PAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDK
        PAGSAVSQESKEEADSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDK
Subjt:  PAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDK

Query:  FGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        FGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRY+PYMGYRSRRPY+ PYFYSPYGGYGKTPRFRRPMRYMPYY
Subjt:  FGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

XP_038882559.1 polyadenylate-binding protein 3-like isoform X2 [Benincasa hispida]9.9e-9971.13Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        M+EEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        SAVSQESKEEADSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRY+PYMGYRSRRPY+ PYFYSPYGGYGKTPRFRRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

TrEMBL top hitse value%identityAlignment
A0A0A0KG83 RRM domain-containing protein4.8e-9970.79Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        MEEEEHEVYGGEIPVEEGDIDMSA DDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        SAVSQESKEEADSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEFVEAEA+QEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPYGGYGKTPRFRRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

A0A5A7T2C2 Polyadenylate-binding protein 2-like1.3e-9971.48Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        SAVSQESKEEADSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEFVEAEAVQEALLLNE+ELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPYGGYGKTPRFRRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

A0A6J1BTY4 polyadenylate-binding protein 3-like isoform X11.3e-9368.38Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        MEEEEHEVYGGEIPVEE D+DMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        +AVSQE+KEE DSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTN+PGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPY GYGK PRFRR M+YMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

A0A6J1HIK8 polyadenylate-binding protein 3-like2.7e-9468.73Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        M+EEEHEVYGGEIPVEEGD+DM+AADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DPAG
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        + VSQESKEE DSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFG 
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPY GYGKTPR+RRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

A0A6J1KVH8 polyadenylate-binding protein 3-like3.5e-9468.73Show/hide
Query:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG
        M+EEEHEVYGGEIPVEEGD+DMSAADD+AIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQ                               DP G
Subjt:  MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAG

Query:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH
        +AVSQESKEE DSRSVFVGN                                                VDYACTPEEVQQHFQSCGTVNRVTILTDKFG 
Subjt:  SAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY
        PKGFAYVEF+EAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPY+ PYFYSPY GYGKTPR+RRPMRYMPYY
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY

SwissProt top hitse value%identityAlignment
O14327 Polyadenylate-binding protein 23.1e-2336.36Show/hide
Query:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGN
        +D DA+    KEL EMK+R+ EME EAA LR MQ +++ E  A+                                        +  KE  D++SV+VGN
Subjt:  ADDDAI----KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGN

Query:  SIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAVQEAL
                                                        VDY+ TPEE+Q HF SCG+VNRVTIL DKF GHPKGFAY+EF E   V  AL
Subjt:  SIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GHPKGFAYVEFVEAEAVQEAL

Query:  LLNESELHGRQLKVQQKRTNIPGMKQYFPQ-----RYNPYMGYRSRRPYMAPY
        LLN S LH R LKV  KRTN+PGM +   +     R     GYR R    APY
Subjt:  LLNESELHGRQLKVQQKRTNIPGMKQYFPQ-----RYNPYMGYRSRRPYMAPY

Q28165 Polyadenylate-binding protein 25.9e-2234.04Show/hide
Query:  EEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAGS
        EEEE      E  + EGD    A +D    EL+ +K R++EMEEEA  L+E+Q +VEK+M                             ++ P  +    
Subjt:  EEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAGS

Query:  AVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GH
         +S E K EAD+RS++VGN                                                VDY  T EE++ HF  CG+VNRVTIL DKF GH
Subjt:  AVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKF-GH

Query:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFR
        PKGFAY+EF + E+V+ +L L+ES   GRQ+KV  KRTN PG+      R  P   YR+R           Y G+   PR R
Subjt:  PKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFR

Q93VI4 Polyadenylate-binding protein 14.8e-5647.88Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEIST
        +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEIST

Query:  AASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQ
                     DP+G  VS   KEE DSRS++VGN                                                VDYACTPEEVQQHFQ
Subjt:  AASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQ

Query:  SCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRR
        SCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNESELHGRQ+KV  KRTN+PGM+Q F  R  P+   R   P +   FY PY  YG+ PRFRR
Subjt:  SCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRR

Query:  PMRYMPY
        PMRY PY
Subjt:  PMRYMPY

Q9FJN9 Polyadenylate-binding protein 21.5e-7858Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICL
        MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA                           
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICL

Query:  ITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNR
              DPA  A +Q  KEE D+RSVFVGN                                                VDYACTPEEVQQHFQ+CGTV+R
Subjt:  ITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNR

Query:  VTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY
        VTILTDKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV QKRTN+PG+KQ+  +R+NPYMGYR RRP+M+PY YSPY GYGK PRFRRPMRYMPY
Subjt:  VTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY

Q9LX90 Polyadenylate-binding protein 35.3e-7959.12Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIP
        MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA Q                             
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIP

Query:  HTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTIL
          DPA  A +QE KEE D+RSV+VGN                                                VDYACTPEEVQ HFQ+CGTVNRVTIL
Subjt:  HTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTIL

Query:  TDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY
         DKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P R+NP MGYR RRP++ PYFYSPY GYGK PRFRRPMRYMPY
Subjt:  TDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY

Arabidopsis top hitse value%identityAlignment
AT5G10350.1 RNA-binding (RRM/RBD/RNP motifs) family protein3.8e-8059.12Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIP
        MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA Q                             
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIP

Query:  HTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTIL
          DPA  A +QE KEE D+RSV+VGN                                                VDYACTPEEVQ HFQ+CGTVNRVTIL
Subjt:  HTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTIL

Query:  TDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY
         DKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P R+NP MGYR RRP++ PYFYSPY GYGK PRFRRPMRYMPY
Subjt:  TDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY

AT5G10350.2 RNA-binding (RRM/RBD/RNP motifs) family protein8.4e-7257.45Show/hide
Query:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIP
        MEEEEHEVYGGEIP      V + DIDMSAAD+DA+ EL EMK+RLKEMEEEAAALREMQAKVEKEMGA Q                             
Subjt:  MEEEEHEVYGGEIP------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIP

Query:  HTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTIL
          DPA  A +QE KEE D+RSV+VGN                                                VDYACTPEEVQ HFQ+CGTVNRVTIL
Subjt:  HTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTIL

Query:  TDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYG
         DKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV  KRTN+PGMKQY P R+NP MGYR RRP++ PYFYSPY GYG
Subjt:  TDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYG

AT5G51120.1 polyadenylate-binding protein 13.4e-5747.88Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEIST
        +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA Q                  
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEIST

Query:  AASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQ
                     DP+G  VS   KEE DSRS++VGN                                                VDYACTPEEVQQHFQ
Subjt:  AASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQ

Query:  SCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRR
        SCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNESELHGRQ+KV  KRTN+PGM+Q F  R  P+   R   P +   FY PY  YG+ PRFRR
Subjt:  SCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRR

Query:  PMRYMPY
        PMRY PY
Subjt:  PMRYMPY

AT5G51120.2 polyadenylate-binding protein 16.2e-5948.24Show/hide
Query:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYI------
        +E+EHEVYGGEIP  EEG++D            +AA D+ +      ++L++MKKR+KE+EEEA ALREMQAK EK+MGA QGL    + +  +      
Subjt:  EEEEHEVYGGEIP-VEEGDIDM-----------SAADDDAI------KELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYI------

Query:  NFEISTAASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEE
        +F  S   S   L      +   S VS   KEE DSRS++VGN                                                VDYACTPEE
Subjt:  NFEISTAASSICLITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEE

Query:  VQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGK
        VQQHFQSCGTVNRVTILTDKFG PKGFAYVEFVE EAVQ +L+LNESELHGRQ+KV  KRTN+PGM+Q F  R  P+   R   P +   FY PY  YG+
Subjt:  VQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGK

Query:  TPRFRRPMRYMPY
         PRFRRPMRY PY
Subjt:  TPRFRRPMRYMPY

AT5G65260.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.1e-7958Show/hide
Query:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICL
        MEEEEHEVYGGEIP              D+DM+AADDDA+KELDEMKKRLKEME+EAAALREMQAKVEKEMGA                           
Subjt:  MEEEEHEVYGGEIP----------VEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICL

Query:  ITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNR
              DPA  A +Q  KEE D+RSVFVGN                                                VDYACTPEEVQQHFQ+CGTV+R
Subjt:  ITIPHTDPAGSAVSQESKEEADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNR

Query:  VTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY
        VTILTDKFG PKGFAYVEFVE EAVQEAL LNESELHGRQLKV QKRTN+PG+KQ+  +R+NPYMGYR RRP+M+PY YSPY GYGK PRFRRPMRYMPY
Subjt:  VTILTDKFGHPKGFAYVEFVEAEAVQEALLLNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATGTCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAA
GAAGCGATTGAAGGAGATGGAGGAGGAGGCAGCTGCTCTTCGCGAAATGCAAGCCAAAGTAGAAAAGGAGATGGGCGCTGTTCAAGGTTTACCTTCATCTCGAATTACCT
TAGACTATATTAATTTTGAAATTTCTACTGCAGCATCTTCAATCTGCCTGATTACAATACCTCATACAGATCCTGCTGGTTCGGCTGTAAGTCAAGAAAGCAAAGAGGAG
GCAGATTCGCGATCCGTGTTTGTTGGCAACAGCATTGTTGCTGCTGGGAATGATGGTAATGGTAACTTATGCTTCATAAATGAGGGCTATTTAACTGTCCTTGTGAGGGT
ACATAATTATGCTTTTCTTGTAGCTTTGATATCGATATCTTGGTTCTATTTATCTCCCTCGCAGGTTGATTATGCGTGTACACCTGAAGAAGTGCAGCAGCATTTCCAAT
CTTGTGGTACTGTCAACAGGGTTACTATTCTTACGGATAAATTTGGTCATCCCAAGGGCTTCGCTTATGTGGAGTTTGTTGAAGCCGAAGCTGTTCAGGAGGCACTCCTT
TTAAATGAGTCAGAGTTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGAACAAATATTCCTGGGATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTA
TCGATCCAGGAGGCCTTACATGGCCCCTTATTTTTACTCACCATATGGAGGATATGGGAAAACGCCCCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAG
mRNA sequenceShow/hide mRNA sequence
ATATCGTATTGCAGACGCCGGCCCGGACACAGGGAAGAACGGAAATGGAGGAAGAGGAGCACGAGGTTTACGGCGGAGAGATCCCGGTCGAGGAGGGTGACATTGACATG
TCTGCCGCCGATGACGACGCCATCAAGGAGCTGGACGAGATGAAGAAGCGATTGAAGGAGATGGAGGAGGAGGCAGCTGCTCTTCGCGAAATGCAAGCCAAAGTAGAAAA
GGAGATGGGCGCTGTTCAAGGTTTACCTTCATCTCGAATTACCTTAGACTATATTAATTTTGAAATTTCTACTGCAGCATCTTCAATCTGCCTGATTACAATACCTCATA
CAGATCCTGCTGGTTCGGCTGTAAGTCAAGAAAGCAAAGAGGAGGCAGATTCGCGATCCGTGTTTGTTGGCAACAGCATTGTTGCTGCTGGGAATGATGGTAATGGTAAC
TTATGCTTCATAAATGAGGGCTATTTAACTGTCCTTGTGAGGGTACATAATTATGCTTTTCTTGTAGCTTTGATATCGATATCTTGGTTCTATTTATCTCCCTCGCAGGT
TGATTATGCGTGTACACCTGAAGAAGTGCAGCAGCATTTCCAATCTTGTGGTACTGTCAACAGGGTTACTATTCTTACGGATAAATTTGGTCATCCCAAGGGCTTCGCTT
ATGTGGAGTTTGTTGAAGCCGAAGCTGTTCAGGAGGCACTCCTTTTAAATGAGTCAGAGTTGCATGGAAGACAATTGAAGGTTCAACAAAAGCGAACAAATATTCCTGGG
ATGAAGCAGTATTTTCCTCAGCGTTACAATCCTTACATGGGTTATCGATCCAGGAGGCCTTACATGGCCCCTTATTTTTACTCACCATATGGAGGATATGGGAAAACGCC
CCGTTTCCGAAGGCCCATGCGATACATGCCATACTACTAGGAAGGGCTTTGCTCATAATTAGATTACCATGAATGTATGACTTTACTCTGGTTCAGAGCCAATAGAACTA
TGGATTTGATTATCATCTTCAGCATTTCTTATTGCAATTACACCAAATGATCTAATGTCTGAGATATGATAATAGTTCATCAGGAACCTGTTCTTAGCATGCTTGAACTT
TTTAGGAGGTTTCTGGCATTTCTTTCTGTTATACGCATACAGATCTAGCGAGAGAGTGAATGTCTACTTCGATATTTCTGCTTCTACTATCTTCTCTCAAGTGATTTTAC
TTGAGTGGGGACAGGAACTTTCTATCAAAA
Protein sequenceShow/hide protein sequence
MEEEEHEVYGGEIPVEEGDIDMSAADDDAIKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQGLPSSRITLDYINFEISTAASSICLITIPHTDPAGSAVSQESKEE
ADSRSVFVGNSIVAAGNDGNGNLCFINEGYLTVLVRVHNYAFLVALISISWFYLSPSQVDYACTPEEVQQHFQSCGTVNRVTILTDKFGHPKGFAYVEFVEAEAVQEALL
LNESELHGRQLKVQQKRTNIPGMKQYFPQRYNPYMGYRSRRPYMAPYFYSPYGGYGKTPRFRRPMRYMPYY