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Clc01G19190 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G19190
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:31553949..31554457
RNA-Seq ExpressionClc01G19190
SyntenyClc01G19190
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036273.1 hypothetical protein E6C27_scaffold18G00720 [Cucumis melo var. makuwa]2.2e-2386.49Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRRED  SVKPPKTAHH GG + GKSSKKV+PGT+FGVP TSNS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS

KAF3969578.1 hypothetical protein CMV_006642 [Castanea mollissima]8.5e-0455Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPG
        MSSI  SCA VYVMKK+ +EKL+RME+ER+ R E S +  K +   G+  G+ SKKV+PG
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPG

KAG6594855.1 hypothetical protein SDJN03_11408, partial [Cucurbita argyrosperma subsp. sororia]2.5e-1976.06Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFGVPATSNS
        MSSIGASCARVYVMKKK EEKLQRMEQE++GRRED VKP KTAHHGGA  G + KKV+PGT+  VPA++ S
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFGVPATSNS

KAG6604014.1 hypothetical protein SDJN03_04623, partial [Cucurbita argyrosperma subsp. sororia]4.6e-1869.86Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH--GGAVTGKSSKKVYPGTIFGVPATSNS
        MSS+GA+CARVYVM+KK EEKL+RMEQER+GR ED+VKPPK+AHH  GG + GK+ KKV+PG +F V A SNS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH--GGAVTGKSSKKVYPGTIFGVPATSNS

KGN48780.1 hypothetical protein Csa_002943 [Cucumis sativus]4.8e-2384.72Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKT+HH  G + GKSSKKV+PGT+FG+ ATSNS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS

TrEMBL top hitse value%identityAlignment
A0A0A0KGB8 Uncharacterized protein2.3e-2384.72Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKT+HH  G + GKSSKKV+PGT+FG+ ATSNS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS

A0A2N9EUS9 Uncharacterized protein6.3e-0555Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPG
        MSSIGASCA +YVM+K+ +EKL+RME+ER  + E SV+  K +   G+  G+ SKKV+PG
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPG

A0A2P5BZF9 Uncharacterized protein5.4e-0447.14Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERS--GRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFGVPAT
        MSSIGASCA VYVM+K+ +EK++RME+ER+  G  +D+         G + T   SKKV+PG   G  +T
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERS--GRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFGVPAT

A0A2P5CW36 Uncharacterized protein5.4e-0448.48Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERS--GRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFG
        MSSIGASCA VYVM+K+ +EK++RME+ER+  G  +D+         GG+ T   SKK++PG   G
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERS--GRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFG

A0A5A7T065 Uncharacterized protein1.0e-2386.49Show/hide
Query:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS
        MSS+GASCARVYVMKKKAEEKLQRMEQERSGRRED  SVKPPKTAHH GG + GKSSKKV+PGT+FGVP TSNS
Subjt:  MSSIGASCARVYVMKKKAEEKLQRMEQERSGRRED--SVKPPKTAHH-GGAVTGKSSKKVYPGTIFGVPATSNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCTCCATAGGAGCTAGCTGCGCTCGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTACAGAGGATGGAGCAGGAGAGATCCGGCAGGAGAGAAGACTCCGT
CAAACCTCCTAAAACTGCCCATCACGGCGGCGCTGTCACCGGCAAATCCAGTAAAAAAGTCTATCCGGGCACCATATTTGGGGTTCCGGCGACCTCTAATTCTTGA
mRNA sequenceShow/hide mRNA sequence
TTTATATTGTCCAATCCAAATATGATACACAAATTGGGGGTTATGGTTATCTGACCCCTACGCTAGGGGCCAACGAAACGCCTACGCCTCTACCAAACAAGTTTTCCACT
ATAAATACAACAAGGGTTTAAGGCATTGAAACCCACCGATTCAAGAAAAAAAGCCCACAGAAAGAATTGTGGACAATTCATTTCAATTCCCTTTTGTAAAAACCATGTCC
TCCATAGGAGCTAGCTGCGCTCGGGTTTATGTAATGAAAAAGAAAGCAGAGGAAAAACTACAGAGGATGGAGCAGGAGAGATCCGGCAGGAGAGAAGACTCCGTCAAACC
TCCTAAAACTGCCCATCACGGCGGCGCTGTCACCGGCAAATCCAGTAAAAAAGTCTATCCGGGCACCATATTTGGGGTTCCGGCGACCTCTAATTCTTGAAAACAGGGCT
CCTCTGGCTTTTACTCTCTGAATGGAAATTCATGTCAGAGTCGGACGTTTTTAGTGCTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MSSIGASCARVYVMKKKAEEKLQRMEQERSGRREDSVKPPKTAHHGGAVTGKSSKKVYPGTIFGVPATSNS