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Clc01G19360 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G19360
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:31654928..31656871
RNA-Seq ExpressionClc01G19360
SyntenyClc01G19360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038881745.1 uncharacterized protein LOC120073162 [Benincasa hispida]3.0e-3658.86Show/hide
Query:  AKLDPQGNGLAFLVLLSHASINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLIRAHVASHSLIPHRQPTGSSFIFLIILILLTGYGTNMSHLRSSDC
        AKLDPQGNGLAFLV LSH SINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLI AHVASHSL PHRQPTG                           
Subjt:  AKLDPQGNGLAFLVLLSHASINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLIRAHVASHSLIPHRQPTGSSFIFLIILILLTGYGTNMSHLRSSDC

Query:  DKAVAALIKMPFESRSKKVWIQPSQVKPRQWKGGQYFPLKRPQSWHLPLARGLVDGYV
                        K VWI  +  K     G  +FP K  QS HLPLARGLVDGYV
Subjt:  DKAVAALIKMPFESRSKKVWIQPSQVKPRQWKGGQYFPLKRPQSWHLPLARGLVDGYV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCTTTTGTGAAATTGAGCTTGCTTTTGACCTGTCGCCTGATTCCTTGGCAGCGAAGCTCGACCCTCAAGGGAATGGGTTGGCTTTCTTGGTGCTTCTGTCGCATGC
ATCCATAAACAAATTAAGGGGAGCTGATGTGCTTGGAAAGTTGTCATTAATTTGGTTTTATCTTCAAGATTCTCCGAGCTGTCACTTTTCTCTTGGTGTCTGGTTGCTGA
TCCGCGCTCACGTTGCTAGCCACTCACTCATCCCCCACCGCCAGCCTACAGGTTCGAGCTTTATTTTCTTAATTATTTTAATCTTATTGACTGGATATGGAACTAATATG
AGCCATCTAAGATCATCAGATTGTGACAAGGCAGTCGCTGCTCTTATTAAGATGCCATTTGAATCCCGTAGTAAGAAGGTTTGGATTCAGCCAAGCCAAGTCAAGCCAAG
GCAATGGAAAGGGGGGCAGTATTTTCCCCTCAAAAGGCCACAGAGTTGGCACTTGCCACTTGCCAGGGGTCTGGTGGATGGCTATGTTGGGTATGTGTTGTGTGTTGAAG
TGAGGATGTGGCCATCTATAAGTCCAAAACTGTCAGGTACTATAGCTTTTACATTTCCACAGAGGCCAAACTGGAAATGCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCTTTTGTGAAATTGAGCTTGCTTTTGACCTGTCGCCTGATTCCTTGGCAGCGAAGCTCGACCCTCAAGGGAATGGGTTGGCTTTCTTGGTGCTTCTGTCGCATGC
ATCCATAAACAAATTAAGGGGAGCTGATGTGCTTGGAAAGTTGTCATTAATTTGGTTTTATCTTCAAGATTCTCCGAGCTGTCACTTTTCTCTTGGTGTCTGGTTGCTGA
TCCGCGCTCACGTTGCTAGCCACTCACTCATCCCCCACCGCCAGCCTACAGGTTCGAGCTTTATTTTCTTAATTATTTTAATCTTATTGACTGGATATGGAACTAATATG
AGCCATCTAAGATCATCAGATTGTGACAAGGCAGTCGCTGCTCTTATTAAGATGCCATTTGAATCCCGTAGTAAGAAGGTTTGGATTCAGCCAAGCCAAGTCAAGCCAAG
GCAATGGAAAGGGGGGCAGTATTTTCCCCTCAAAAGGCCACAGAGTTGGCACTTGCCACTTGCCAGGGGTCTGGTGGATGGCTATGTTGGGTATGTGTTGTGTGTTGAAG
TGAGGATGTGGCCATCTATAAGTCCAAAACTGTCAGGTACTATAGCTTTTACATTTCCACAGAGGCCAAACTGGAAATGCAAATGA
Protein sequenceShow/hide protein sequence
MCFCEIELAFDLSPDSLAAKLDPQGNGLAFLVLLSHASINKLRGADVLGKLSLIWFYLQDSPSCHFSLGVWLLIRAHVASHSLIPHRQPTGSSFIFLIILILLTGYGTNM
SHLRSSDCDKAVAALIKMPFESRSKKVWIQPSQVKPRQWKGGQYFPLKRPQSWHLPLARGLVDGYVGYVLCVEVRMWPSISPKLSGTIAFTFPQRPNWKCK