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Clc01G19370 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G19370
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr01:31656760..31657590
RNA-Seq ExpressionClc01G19370
SyntenyClc01G19370
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647580.1 hypothetical protein Csa_003027 [Cucumis sativus]4.8e-1988.89Show/hide
Query:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEGGGRKENVFEHEDYVYTQSLP
        HGRA SNGIVVGSIKSFNLGR GCQK NVEC++G GRKENVFEHEDYVYTQSLP
Subjt:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEGGGRKENVFEHEDYVYTQSLP

KAE9601283.1 hypothetical protein Lalb_Chr13g0296161 [Lupinus albus]1.4e-0558.18Show/hide
Query:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP
        HGR   N  VV S  S    R GC+K   ECKEG GG KE  FE+EDYVYT SLP
Subjt:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP

KAF1887834.1 hypothetical protein Lal_00023842 [Lupinus albus]1.4e-0558.18Show/hide
Query:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP
        HGR   N  VV S  S    R GC+K   ECKEG GG KE  FE+EDYVYT SLP
Subjt:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP

KAF7834232.1 putative transmembrane protein [Senna tora]7.4e-0453.57Show/hide
Query:  SNGIVVGSIKSF------NLGRPGCQKANVECKEGGGR-KENVFEHEDYVYTQSLP
        SN +VVGS  S       N    GC+K  VECKEG G  +ENV E+EDY+YT SLP
Subjt:  SNGIVVGSIKSF------NLGRPGCQKANVECKEGGGR-KENVFEHEDYVYTQSLP

TKY73914.1 hypothetical protein E2542_SST02671 [Spatholobus suberectus]6.7e-0553.7Show/hide
Query:  GRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP
        G A +N  VV S  S  +GR GC+K   ECKEG GG ++ V E+EDY+YT SLP
Subjt:  GRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP

TrEMBL top hitse value%identityAlignment
A0A2N9EH86 Uncharacterized protein1.2e-0468.42Show/hide
Query:  NLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP
        N GR  C K  VECKEG GG +ENVFE+EDY+YT SLP
Subjt:  NLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP

A0A6A4PI88 Uncharacterized protein6.5e-0658.18Show/hide
Query:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP
        HGR   N  VV S  S    R GC+K   ECKEG GG KE  FE+EDYVYT SLP
Subjt:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP

A0A6A5NJ21 Uncharacterized protein6.5e-0658.18Show/hide
Query:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP
        HGR   N  VV S  S    R GC+K   ECKEG GG KE  FE+EDYVYT SLP
Subjt:  HGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP

A0A7J6EBF5 Uncharacterized protein8.0e-0445.76Show/hide
Query:  HGR----AKSNGIVVGSIKSFNLGRPGCQK-ANVECKEGGGRKENVFEHEDYVYTQSLP
        HG+    + +N   V S  S N+GR  C K  NVECK+   ++++VFE EDY+YT SLP
Subjt:  HGR----AKSNGIVVGSIKSFNLGRPGCQK-ANVECKEGGGRKENVFEHEDYVYTQSLP

A0A7N2LYV5 Uncharacterized protein3.8e-0656.36Show/hide
Query:  GRAKSNGIVVGSI-KSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP
        G+A +N ++VGS   S N GR  C K  VECKEG GG +EN +E+EDY+YT SLP
Subjt:  GRAKSNGIVVGSI-KSFNLGRPGCQKANVECKEG-GGRKENVFEHEDYVYTQSLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCATGCGACAGAAGCACCAAGAAAGCCAACCCATTCCCTTGAGGGTCGAGCTTCGCTGCCAAGGAATCAGGCGACAGGGCATGGACGTGCAAAATCCAATGGAATAGT
GGTGGGTTCCATTAAATCCTTCAATTTGGGAAGACCCGGGTGTCAAAAAGCCAATGTTGAATGCAAAGAGGGGGGCGGAAGAAAAGAGAATGTTTTTGAACATGAAGACT
ATGTCTACACTCAATCTCTCCCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCATGCGACAGAAGCACCAAGAAAGCCAACCCATTCCCTTGAGGGTCGAGCTTCGCTGCCAAGGAATCAGGCGACAGGGCATGGACGTGCAAAATCCAATGGAATAGT
GGTGGGTTCCATTAAATCCTTCAATTTGGGAAGACCCGGGTGTCAAAAAGCCAATGTTGAATGCAAAGAGGGGGGCGGAAGAAAAGAGAATGTTTTTGAACATGAAGACT
ATGTCTACACTCAATCTCTCCCTTAGACTATGTTTCCTACTTCAATGCCTGAGATAAGGGGGAAATCGAAACCTGTCTCTAAGCTAATTTATCAAGTACCTGCAGCATTT
TACAAGTCAATTTGAAGCTCCAAACTTCTTTCCTTTGTAGAATCTGCAAATCCTCTGAAGATGACGTTTCTGGCTGCGTAATAAATTTTGCCTTTGTATTTGCAAGAATA
AAGGGA
Protein sequenceShow/hide protein sequence
MHATEAPRKPTHSLEGRASLPRNQATGHGRAKSNGIVVGSIKSFNLGRPGCQKANVECKEGGGRKENVFEHEDYVYTQSLP