; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G19625 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G19625
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLate embryogenesis abundant protein
Genome locationClcChr01:31838842..31839942
RNA-Seq ExpressionClc01G19625
SyntenyClc01G19625
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008441122.1 PREDICTED: uncharacterized protein LOC103485350 [Cucumis melo]3.5e-4379.56Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRR-ICSPELRSRQAIGFATAPEQNRKD--MDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESE
        MINAIRFGRTPPPI+LTSPLPPQLRR ICS ELRSRQA GFATAP+QN KD  MD+SQ K KETGDIM DSFGEGY+TRS+EEGFGGTYGGN   DD+ E
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRR-ICSPELRSRQAIGFATAPEQNRKD--MDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESE

Query:  --NKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
          NKKS    N+H EYDRSQGSEVKEKEKSRHQ HAN
Subjt:  --NKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

XP_011658492.1 uncharacterized protein LOC101219972 [Cucumis sativus]6.6e-4278.68Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRK--DMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGN-QSI-DDES
        MINAIRFGRTPPPI+LTSPLPP+LRRI SPEL SRQAI FATAP++N K  +MDDSQ K KETGDIM DSFGEGY+TRS+EEGFGGTYGG  QSI DDE 
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRK--DMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGN-QSI-DDES

Query:  ENKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
         NKK     NQH EYD+SQGSEVKEKEKSRHQ HAN
Subjt:  ENKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

XP_022133090.1 uncharacterized protein LOC111005770 [Momordica charantia]8.9e-3969.92Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAP-EQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENK
        M +AIR GR+PPP +LT+PLPPQLRR  SPELRSRQ IG ATAP +Q+  +MDDS+   K+TGDIMS SFGEGY+TRSDEEGFGG YGGN+S DD++E K
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAP-EQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENK

Query:  KSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
           +H N H EYD+SQGSEVKEKE SRHQ HAN
Subjt:  KSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

XP_023543426.1 uncharacterized protein LOC111803316 [Cucurbita pepo subsp. pepo]3.0e-3464.39Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENKK
        MINAIRFGR+PPPI+LT PLPPQLRRI +PELRSRQ IGF+TAP+QN ++MDDS+   K+TGDIM+DSFG  Y+ RS+ EGFGG Y   +S ++ +EN+K
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENKK

Query:  SFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
                 EYD+SQGSEVKEKEK+RHQ H+N
Subjt:  SFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

XP_038883658.1 uncharacterized protein LOC120074572 [Benincasa hispida]1.5e-4982.58Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENKK
        MINAIRFGRTPPPI+LTSPLPPQLRRICSPELRSRQAIG ATAP+QN  DMDDSQ K KETGDIM DSFGE Y+TRS+EEGFGGTYG NQ  DDE++NKK
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENKK

Query:  SFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
           HGNQH EYD+SQG EVKEKEKSRHQ HAN
Subjt:  SFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

TrEMBL top hitse value%identityAlignment
A0A0A0KGG3 Uncharacterized protein3.2e-4278.68Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRK--DMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGN-QSI-DDES
        MINAIRFGRTPPPI+LTSPLPP+LRRI SPEL SRQAI FATAP++N K  +MDDSQ K KETGDIM DSFGEGY+TRS+EEGFGGTYGG  QSI DDE 
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRK--DMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGN-QSI-DDES

Query:  ENKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
         NKK     NQH EYD+SQGSEVKEKEKSRHQ HAN
Subjt:  ENKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

A0A1S3B3C5 uncharacterized protein LOC1034853501.7e-4379.56Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRR-ICSPELRSRQAIGFATAPEQNRKD--MDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESE
        MINAIRFGRTPPPI+LTSPLPPQLRR ICS ELRSRQA GFATAP+QN KD  MD+SQ K KETGDIM DSFGEGY+TRS+EEGFGGTYGGN   DD+ E
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRR-ICSPELRSRQAIGFATAPEQNRKD--MDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESE

Query:  --NKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
          NKKS    N+H EYDRSQGSEVKEKEKSRHQ HAN
Subjt:  --NKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

A0A5D3CN97 Late embryogenesis abundant protein1.7e-4379.56Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRR-ICSPELRSRQAIGFATAPEQNRKD--MDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESE
        MINAIRFGRTPPPI+LTSPLPPQLRR ICS ELRSRQA GFATAP+QN KD  MD+SQ K KETGDIM DSFGEGY+TRS+EEGFGGTYGGN   DD+ E
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRR-ICSPELRSRQAIGFATAPEQNRKD--MDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESE

Query:  --NKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
          NKKS    N+H EYDRSQGSEVKEKEKSRHQ HAN
Subjt:  --NKKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

A0A6J1BUB9 uncharacterized protein LOC1110057704.3e-3969.92Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAP-EQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENK
        M +AIR GR+PPP +LT+PLPPQLRR  SPELRSRQ IG ATAP +Q+  +MDDS+   K+TGDIMS SFGEGY+TRSDEEGFGG YGGN+S DD++E K
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAP-EQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENK

Query:  KSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
           +H N H EYD+SQGSEVKEKE SRHQ HAN
Subjt:  KSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

A0A6J1GES9 uncharacterized protein LOC1114535097.1e-3462.88Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENKK
        MIN+IRFGR PPPI+LT PLPP+LRRI SPELRSRQ IGF+TAP+QN+++MDDS+   K++GDIM+DSFG  Y+ RS+ EGFGG Y   +S ++ +EN+K
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENKK

Query:  SFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
                 EYD+SQGSEVKEKEK+RHQ H+N
Subjt:  SFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G66780.1 unknown protein9.2e-1844.78Show/hide
Query:  MINAIRFGRTPPPILLTSPLPPQLRRICS-PELRSRQAIGFATAPEQNRKDMDDSQKKPKE-TGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESEN
        MINA +  R+ P     S         CS P    R+  G + A   +++ MD   + P E TGD+MS S+GEGY+TRSDEEGFGG YGGNQ++  E+E 
Subjt:  MINAIRFGRTPPPILLTSPLPPQLRRICS-PELRSRQAIGFATAPEQNRKDMDDSQKKPKE-TGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESEN

Query:  KKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN
            +H N H +YD++QGSE KEKEK+R+Q  ++
Subjt:  KKSFLHGNQHEEYDRSQGSEVKEKEKSRHQPHAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTTTGCTCACATCACCTCTTCCGCCGCAGCTCCGCCGTATTTGCTCGCCTGAGCTCCGATCCCGTCAAGC
GATTGGTTTTGCCACTGCACCTGAACAGAACCGAAAGGACATGGATGACTCTCAGAAGAAACCCAAGGAGACTGGAGATATAATGTCTGATTCCTTCGGCGAAGGGTACT
CAACTCGAAGCGATGAAGAAGGATTTGGAGGAACTTATGGAGGGAATCAGTCAATCGATGACGAATCTGAGAATAAAAAATCGTTTCTCCACGGGAATCAACATGAAGAA
TATGATAGAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGTCACGCCATCAGCCTCATGCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATCAACGCAATCAGATTCGGCCGTACTCCACCGCCGATTTTGCTCACATCACCTCTTCCGCCGCAGCTCCGCCGTATTTGCTCGCCTGAGCTCCGATCCCGTCAAGC
GATTGGTTTTGCCACTGCACCTGAACAGAACCGAAAGGACATGGATGACTCTCAGAAGAAACCCAAGGAGACTGGAGATATAATGTCTGATTCCTTCGGCGAAGGGTACT
CAACTCGAAGCGATGAAGAAGGATTTGGAGGAACTTATGGAGGGAATCAGTCAATCGATGACGAATCTGAGAATAAAAAATCGTTTCTCCACGGGAATCAACATGAAGAA
TATGATAGAAGCCAAGGGAGCGAAGTGAAGGAGAAGGAGAAGTCACGCCATCAGCCTCATGCAAATTGA
Protein sequenceShow/hide protein sequence
MINAIRFGRTPPPILLTSPLPPQLRRICSPELRSRQAIGFATAPEQNRKDMDDSQKKPKETGDIMSDSFGEGYSTRSDEEGFGGTYGGNQSIDDESENKKSFLHGNQHEE
YDRSQGSEVKEKEKSRHQPHAN