; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G20110 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G20110
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
Genome locationClcChr01:32125373..32128339
RNA-Seq ExpressionClc01G20110
SyntenyClc01G20110
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150000.1 transcription factor bHLH110 [Cucumis sativus]5.7e-15487.64Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY-QQQPNE-QQLSTLYSSVQSPAS
        MESANLQHQLQELFVGYSSLVSAPRT PI THEC +PNI+L+GNSYNNPYLV+QSLQCSSR  ENDQNVWFNFSSTY QQQPNE QQLS LYSS+QSPAS
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY-QQQPNE-QQLSTLYSSVQSPAS

Query:  YGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHHV
        YG   GISAGSNTNYY NN+FSSS RNNN+N  +SSSTSTLDLLSSSSFSS+MGYNL A D HHHLDFLSTPNY SS F+KNRALFGY      H HHHV
Subjt:  YGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHHV

Query:  QDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQ
        QDSINNNNSPSNSSNKTSSSSVARAKRP+NSMSEPKKSNNPESKKSCSTSR+SCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQ
Subjt:  QDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQ

Query:  VETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        VETLSMPYLGSSQSKPYQKQQP SI E+GTKPRQDLRSRGLCLMPLS ASFIHG+D
Subjt:  VETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

XP_008440761.1 PREDICTED: transcription factor bHLH110-like isoform X1 [Cucumis melo]2.8e-15387.11Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY--QQQPNE-QQLSTLYSSVQSPA
        MESANLQHQLQELFVGYSSLVSAPRT PI THEC +PNI+L+GNSYNNPYLV+QSLQCSS+  ENDQNVWFNFSSTY  QQQPNE QQLS LYSS+QSPA
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY--QQQPNE-QQLSTLYSSVQSPA

Query:  SYGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHH
        SYG  QGISAGSNTNYY NN+FSSS RNNN+N  +SSSTSTLDLLSSSSFSS++GYNL A D HHHLDFLSTPNY SS F+KNRALFGY      H HH 
Subjt:  SYGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHH

Query:  VQDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD
        VQDSINNNNSPSNSSNKTSSSSVARAKRP+NSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD
Subjt:  VQDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD

Query:  QVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        QVETLSMPYLGSSQSKPYQKQQP SI E+GTKPRQDLRSRGLCLMPLS ASFIHG+D
Subjt:  QVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

XP_022949972.1 transcription factor bHLH110-like [Cucurbita moschata]6.1e-14082.37Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ
        MESANLQHQLQELFVGYSSLVS PRTAPITHEC+PNIILDG+SYNN YLVDQS+ CS    ++N WFNFSSTYQQ QPNEQQLSTLYSS+QSPASYGGFQ
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ

Query:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN
        GISAGSN NYY N               SS+STLDLLSSSSFSSSMGYNLQAA H H+DFLS  NYSSGF+KNRA+FGY    HH HVQDS+NNNNSPSN
Subjt:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN

Query:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS
        SSNK SS SV RAKRP NS+S PKK SNNPESKKSCS+SRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYL S
Subjt:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS

Query:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        SQSKPYQK QQP  I EDGT+PRQDLRSRGLCLMPLS ASFIHGFD
Subjt:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

XP_023543353.1 transcription factor bHLH133-like [Cucurbita pepo subsp. pepo]4.2e-14182.95Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ
        MESANLQHQLQELFVGYSSLVSAPRTAPITHEC+PNIILDG+SYNN YLVDQS+ CS    ++N WFNFSSTYQQ QPNEQQLSTLYSS+QSPASYGGFQ
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ

Query:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN
        G+SAGSN NYY N               SSTSTLDLLSSSSFSSSMGYNLQAA H H+DFLS  NYSSGF+KNRA+FGY    HH HVQDS+NNNNSPSN
Subjt:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN

Query:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS
        SSNK SS SV RAKRP NS+S PKK SNNPESKKSCS+SRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYL S
Subjt:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS

Query:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        SQSKPYQK QQP  I EDGTKPRQDLRSRGLCLMPLS ASFIHGFD
Subjt:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

XP_038881337.1 transcription factor bHLH133-like [Benincasa hispida]8.4e-15888.86Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THECNPNIILDGNSYNNPYLVDQSLQCSSREND-QNVWFNFSSTYQQQ--PNEQQLSTLYSSVQSPASYG
        MESANLQHQLQELFVGYSSLVSAPRTAPI THECNPNIIL+GNSYNNP LVDQSLQCSSREN+ +NVWFNFSSTYQ+Q  PNEQQLSTLYSSVQSPASYG
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THECNPNIILDGNSYNNPYLVDQSLQCSSREND-QNVWFNFSSTYQQQ--PNEQQLSTLYSSVQSPASYG

Query:  GFQGISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAA---DHHHLDFL-STPNYSSGFSKNRALFGYGAHQHHHVQDSINN
        GFQGI AGSNTNYYTN+V+S++S NNN+N  S+TSTLDLLSSSSFSSSMGYNLQAA    HHHLDFL STPNYSSGF+KNRALFGY    HHHVQDSINN
Subjt:  GFQGISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAA---DHHHLDFL-STPNYSSGFSKNRALFGYGAHQHHHVQDSINN

Query:  NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSM
        NNSPSNSSNKTSS+SV RAKRPV S+SEPKKSNNPESKKSCSTSRS+CPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSM
Subjt:  NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSM

Query:  PYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        PYLGSSQSKPYQKQQP  I EDGTKPRQDLRSRGLCLMP+S ASFIHGFD
Subjt:  PYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

TrEMBL top hitse value%identityAlignment
A0A0A0KGK3 BHLH domain-containing protein2.7e-15487.64Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY-QQQPNE-QQLSTLYSSVQSPAS
        MESANLQHQLQELFVGYSSLVSAPRT PI THEC +PNI+L+GNSYNNPYLV+QSLQCSSR  ENDQNVWFNFSSTY QQQPNE QQLS LYSS+QSPAS
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY-QQQPNE-QQLSTLYSSVQSPAS

Query:  YGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHHV
        YG   GISAGSNTNYY NN+FSSS RNNN+N  +SSSTSTLDLLSSSSFSS+MGYNL A D HHHLDFLSTPNY SS F+KNRALFGY      H HHHV
Subjt:  YGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHHV

Query:  QDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQ
        QDSINNNNSPSNSSNKTSSSSVARAKRP+NSMSEPKKSNNPESKKSCSTSR+SCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQ
Subjt:  QDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQ

Query:  VETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        VETLSMPYLGSSQSKPYQKQQP SI E+GTKPRQDLRSRGLCLMPLS ASFIHG+D
Subjt:  VETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

A0A1S3B1F5 transcription factor bHLH110-like isoform X11.4e-15387.11Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY--QQQPNE-QQLSTLYSSVQSPA
        MESANLQHQLQELFVGYSSLVSAPRT PI THEC +PNI+L+GNSYNNPYLV+QSLQCSS+  ENDQNVWFNFSSTY  QQQPNE QQLS LYSS+QSPA
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY--QQQPNE-QQLSTLYSSVQSPA

Query:  SYGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHH
        SYG  QGISAGSNTNYY NN+FSSS RNNN+N  +SSSTSTLDLLSSSSFSS++GYNL A D HHHLDFLSTPNY SS F+KNRALFGY      H HH 
Subjt:  SYGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHH

Query:  VQDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD
        VQDSINNNNSPSNSSNKTSSSSVARAKRP+NSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD
Subjt:  VQDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD

Query:  QVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        QVETLSMPYLGSSQSKPYQKQQP SI E+GTKPRQDLRSRGLCLMPLS ASFIHG+D
Subjt:  QVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

A0A5A7SMP4 Transcription factor bHLH110-like isoform X11.4e-15387.11Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY--QQQPNE-QQLSTLYSSVQSPA
        MESANLQHQLQELFVGYSSLVSAPRT PI THEC +PNI+L+GNSYNNPYLV+QSLQCSS+  ENDQNVWFNFSSTY  QQQPNE QQLS LYSS+QSPA
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPI-THEC-NPNIILDGNSYNNPYLVDQSLQCSSR--ENDQNVWFNFSSTY--QQQPNE-QQLSTLYSSVQSPA

Query:  SYGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHH
        SYG  QGISAGSNTNYY NN+FSSS RNNN+N  +SSSTSTLDLLSSSSFSS++GYNL A D HHHLDFLSTPNY SS F+KNRALFGY      H HH 
Subjt:  SYGGFQGISAGSNTNYYTNNVFSSSSRNNNSN--SSSSTSTLDLLSSSSFSSSMGYNLQAAD-HHHLDFLSTPNY-SSGFSKNRALFGYG----AHQHHH

Query:  VQDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD
        VQDSINNNNSPSNSSNKTSSSSVARAKRP+NSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD
Subjt:  VQDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHD

Query:  QVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        QVETLSMPYLGSSQSKPYQKQQP SI E+GTKPRQDLRSRGLCLMPLS ASFIHG+D
Subjt:  QVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

A0A6J1GDJ8 transcription factor bHLH110-like2.9e-14082.37Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ
        MESANLQHQLQELFVGYSSLVS PRTAPITHEC+PNIILDG+SYNN YLVDQS+ CS    ++N WFNFSSTYQQ QPNEQQLSTLYSS+QSPASYGGFQ
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ

Query:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN
        GISAGSN NYY N               SS+STLDLLSSSSFSSSMGYNLQAA H H+DFLS  NYSSGF+KNRA+FGY    HH HVQDS+NNNNSPSN
Subjt:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN

Query:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS
        SSNK SS SV RAKRP NS+S PKK SNNPESKKSCS+SRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYL S
Subjt:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS

Query:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        SQSKPYQK QQP  I EDGT+PRQDLRSRGLCLMPLS ASFIHGFD
Subjt:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

A0A6J1IU97 transcription factor bHLH133-like1.5e-13982.37Show/hide
Query:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ
        MESANLQHQLQELFVGYSSLVSAPRTAPITHEC+PNIILDG+SYNN YLVDQS+ CS    ++N  FNFSSTYQQ QPNEQQLSTLYSS+QSPASYGGFQ
Subjt:  MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQ-QPNEQQLSTLYSSVQSPASYGGFQ

Query:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN
        G+SAGSN NYY N               SSTSTLDLLSSSSFSS+MGYNLQAA H H+DFLS  NYSSGF+KNRA+FGY    HH HVQDS+NNNNSPSN
Subjt:  GISAGSNTNYYTNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHH-HVQDSINNNNSPSN

Query:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS
        SSNK SS SV RAKRP NS+S PKK SNNPESKKSCS+SRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYL S
Subjt:  SSNKTSSSSVARAKRPVNSMSEPKK-SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGS

Query:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD
        SQSKPYQK QQP  I EDGTKPRQDLRSRGLCLMPLS ASFIHGFD
Subjt:  SQSKPYQK-QQPASIPEDGTKPRQDLRSRGLCLMPLSYASFIHGFD

SwissProt top hitse value%identityAlignment
Q7XHI5 Transcription factor bHLH1332.0e-1333.33Show/hide
Query:  NYYTNNVFSSSSR------NNNSNSSSSTSTLDLLSSSSFSSS--------MG--YNLQAADHHHLDFLSTPNYSSGFSKNRALFGYG---AHQHHHVQD
        N++++   SSSS       N+N N SS     DL     +S S        MG    ++  +HHH       N    +   R          HQ    Q+
Subjt:  NYYTNNVFSSSSR------NNNSNSSSSTSTLDLLSSSSFSSS--------MG--YNLQAADHHHLDFLSTPNYSSGFSKNRALFGYG---AHQHHHVQD

Query:  SINNN--------NSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPE-------SKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVL
        S NNN        NSP N S  T  ++       ++S     + N+ E       +KK      SS   LKVRKEKLG RI++L +LV+PFGKTDT+SVL
Subjt:  SINNN--------NSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPE-------SKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVL

Query:  TEAIGYIQFLHDQVETLSMPYLG-----SSQSKPYQKQQPASIPED--------------------------GTKPRQDLRSRGLCLMPLS
        +EAIGYI+FLH Q+E LS+PY G     +   +  Q+      PED                            +P +DLRSRGLCL+P+S
Subjt:  TEAIGYIQFLHDQVETLSMPYLG-----SSQSKPYQKQQPASIPED--------------------------GTKPRQDLRSRGLCLMPLS

Q8GXT3 Transcription factor bHLH1231.2e-1846.1Show/hide
Query:  NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSM
        +  P N S    SSS        N +      + P +K++ S + S  P  K RKEK+GDRI+ALQ+LV+PFGKTD +SVL+EAI YI+FLH QV  LS 
Subjt:  NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSM

Query:  PYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS
        PY+ S  S  +Q+   ++  E   +P  DLRSRGLCL+P+S
Subjt:  PYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS

Q8S3D1 Transcription factor bHLH682.2e-1532.24Show/hide
Query:  SNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHHHVQDSINNNNSPSNSSNKTSSSSVARAKR-PVNSMSEPK
        S+  +S   +D+    + +++ GY + + +        T   ++  + N               D+INNNN+  + S+  +   ++  +  P +  SE  
Subjt:  SNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHHHVQDSINNNNSPSNSSNKTSSSSVARAKR-PVNSMSEPK

Query:  K---SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQ------PASIPE
              +   K     S SS   LKVRKEKLG RI+AL +LV+PFGKTDT+SVL+EAIGYI+FL  Q+E LS PY G++ S   + QQ          PE
Subjt:  K---SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQ------PASIPE

Query:  D-------------------------GTKPRQDLRSRGLCLMPLS
        D                           +P++DLRSRGLCL+P+S
Subjt:  D-------------------------GTKPRQDLRSRGLCLMPLS

Q8VZ22 Transcription factor bHLH1033.0e-1741.33Show/hide
Query:  SINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQV-
        S+ ++  P        S +  +     +   E  +S+ P  +    T  S  P  KVRKEKLGDRI+ALQ+LV+PFGKTDT+SVL +AI YI+FL +Q+ 
Subjt:  SINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQV-

Query:  -ETLSMPYL---GSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS
         +  + P+L   GS + K +  +   +       PRQDLRSRGLCLMP+S
Subjt:  -ETLSMPYL---GSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS

Q9SFZ3 Transcription factor bHLH1101.0e-2538.1Show/hide
Query:  LYSSVQSPASYGGFQGISAGSNTNYYTNNVFSSSSRNN--------NSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLD-------FLSTPNYSSGF
        L  S+ S     G  G S  S+++  +++  S S R N        N +S S +  + +   S+ S     N+Q  D    +       F +    S G 
Subjt:  LYSSVQSPASYGGFQGISAGSNTNYYTNNVFSSSSRNN--------NSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLD-------FLSTPNYSSGF

Query:  SKNRALFGYGAHQHHHVQDSINN-NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTD
        S+  +L  +G   HHH+Q ++ + ++SP++     S+       +  N +   K   N  SKK    SRSSCPP KVRKEKLGDRI+ALQ+LV+PFGKTD
Subjt:  SKNRALFGYGAHQHHHVQDSINN-NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTD

Query:  TSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPR-QDLRSRGLCLMPLSYASFIHG
        T+SVL EAIGYI+FL  Q+ETLS+PY+ +S+++P +  Q  S  ++G +   +DLRSRGLCL+PLS  +++ G
Subjt:  TSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPR-QDLRSRGLCLMPLSYASFIHG

Arabidopsis top hitse value%identityAlignment
AT1G27660.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein7.4e-2738.1Show/hide
Query:  LYSSVQSPASYGGFQGISAGSNTNYYTNNVFSSSSRNN--------NSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLD-------FLSTPNYSSGF
        L  S+ S     G  G S  S+++  +++  S S R N        N +S S +  + +   S+ S     N+Q  D    +       F +    S G 
Subjt:  LYSSVQSPASYGGFQGISAGSNTNYYTNNVFSSSSRNN--------NSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLD-------FLSTPNYSSGF

Query:  SKNRALFGYGAHQHHHVQDSINN-NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTD
        S+  +L  +G   HHH+Q ++ + ++SP++     S+       +  N +   K   N  SKK    SRSSCPP KVRKEKLGDRI+ALQ+LV+PFGKTD
Subjt:  SKNRALFGYGAHQHHHVQDSINN-NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTD

Query:  TSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPR-QDLRSRGLCLMPLSYASFIHG
        T+SVL EAIGYI+FL  Q+ETLS+PY+ +S+++P +  Q  S  ++G +   +DLRSRGLCL+PLS  +++ G
Subjt:  TSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPR-QDLRSRGLCLMPLSYASFIHG

AT2G20100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.4e-1433.33Show/hide
Query:  NYYTNNVFSSSSR------NNNSNSSSSTSTLDLLSSSSFSSS--------MG--YNLQAADHHHLDFLSTPNYSSGFSKNRALFGYG---AHQHHHVQD
        N++++   SSSS       N+N N SS     DL     +S S        MG    ++  +HHH       N    +   R          HQ    Q+
Subjt:  NYYTNNVFSSSSR------NNNSNSSSSTSTLDLLSSSSFSSS--------MG--YNLQAADHHHLDFLSTPNYSSGFSKNRALFGYG---AHQHHHVQD

Query:  SINNN--------NSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPE-------SKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVL
        S NNN        NSP N S  T  ++       ++S     + N+ E       +KK      SS   LKVRKEKLG RI++L +LV+PFGKTDT+SVL
Subjt:  SINNN--------NSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPE-------SKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVL

Query:  TEAIGYIQFLHDQVETLSMPYLG-----SSQSKPYQKQQPASIPED--------------------------GTKPRQDLRSRGLCLMPLS
        +EAIGYI+FLH Q+E LS+PY G     +   +  Q+      PED                            +P +DLRSRGLCL+P+S
Subjt:  TEAIGYIQFLHDQVETLSMPYLG-----SSQSKPYQKQQPASIPED--------------------------GTKPRQDLRSRGLCLMPLS

AT3G20640.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.7e-2046.1Show/hide
Query:  NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSM
        +  P N S    SSS        N +      + P +K++ S + S  P  K RKEK+GDRI+ALQ+LV+PFGKTD +SVL+EAI YI+FLH QV  LS 
Subjt:  NNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSM

Query:  PYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS
        PY+ S  S  +Q+   ++  E   +P  DLRSRGLCL+P+S
Subjt:  PYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS

AT4G21340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein2.2e-1841.33Show/hide
Query:  SINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQV-
        S+ ++  P        S +  +     +   E  +S+ P  +    T  S  P  KVRKEKLGDRI+ALQ+LV+PFGKTDT+SVL +AI YI+FL +Q+ 
Subjt:  SINNNNSPSNSSNKTSSSSVARAKRPVNSMSEPKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQV-

Query:  -ETLSMPYL---GSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS
         +  + P+L   GS + K +  +   +       PRQDLRSRGLCLMP+S
Subjt:  -ETLSMPYL---GSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLMPLS

AT4G29100.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein1.5e-1632.24Show/hide
Query:  SNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHHHVQDSINNNNSPSNSSNKTSSSSVARAKR-PVNSMSEPK
        S+  +S   +D+    + +++ GY + + +        T   ++  + N               D+INNNN+  + S+  +   ++  +  P +  SE  
Subjt:  SNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHHHVQDSINNNNSPSNSSNKTSSSSVARAKR-PVNSMSEPK

Query:  K---SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQ------PASIPE
              +   K     S SS   LKVRKEKLG RI+AL +LV+PFGKTDT+SVL+EAIGYI+FL  Q+E LS PY G++ S   + QQ          PE
Subjt:  K---SNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQ------PASIPE

Query:  D-------------------------GTKPRQDLRSRGLCLMPLS
        D                           +P++DLRSRGLCL+P+S
Subjt:  D-------------------------GTKPRQDLRSRGLCLMPLS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTCTGCTAATCTCCAACATCAACTTCAAGAACTCTTTGTTGGATATTCTTCTTTGGTATCAGCTCCAAGAACAGCTCCCATCACTCATGAATGCAACCCCAATAT
CATTTTGGACGGAAATTCCTACAATAACCCTTATTTAGTGGATCAAAGCTTACAATGTTCATCAAGGGAGAATGATCAGAATGTATGGTTTAATTTCTCATCAACTTACC
AACAACAACCCAACGAACAGCAACTTTCAACTCTTTATTCTTCTGTTCAATCTCCAGCAAGTTATGGAGGTTTTCAAGGGATATCAGCTGGATCCAACACCAATTATTAC
ACCAATAATGTTTTTTCGAGCAGTTCAAGGAATAATAATAGTAATAGTAGTAGTAGTACTTCAACGTTGGATTTGTTGTCTTCATCATCATTTTCAAGTTCCATGGGCTA
CAATTTACAGGCTGCTGATCATCATCATTTGGATTTTCTATCAACCCCAAATTATTCAAGTGGTTTTAGCAAAAATAGAGCTCTATTTGGCTATGGCGCTCATCAACATC
ATCATGTCCAAGATTCAATTAATAATAACAACAGCCCATCAAACAGCTCCAATAAAACTTCATCATCAAGTGTTGCAAGAGCAAAGAGGCCAGTTAACAGCATGTCTGAG
CCTAAAAAGTCAAATAATCCAGAATCTAAGAAATCTTGCTCCACTTCAAGATCCTCTTGCCCACCATTAAAGGTGAGAAAAGAGAAATTGGGAGACAGGATTTCAGCACT
TCAAAGGCTGGTTGCACCTTTTGGTAAGACTGATACTTCCTCAGTTCTAACCGAAGCAATTGGCTACATTCAGTTTCTTCATGACCAAGTTGAGACTTTAAGCATGCCAT
ATTTGGGGTCCTCTCAGAGCAAACCCTACCAAAAACAGCAGCCTGCTTCGATCCCGGAGGATGGAACAAAACCAAGGCAAGATCTTAGAAGCAGAGGGCTATGCCTTATG
CCACTTTCCTACGCTTCATTCATTCATGGTTTTGATTGA
mRNA sequenceShow/hide mRNA sequence
AATTTATAATTTTAATTTGATGAGCATATATGTTTTGAACAACTTTCTTCTTTCCAAATGATACTATAAACTTTGGAATTGGAAGGGCCAAGAAGACAACACACAACAGT
AAAGTTGGGAAAAAAGGAAAAGGCAACTCTCCCCCATTATCATCTCCTCCCTTTAATCATTTCATTCTATTCTTTTTTTTCAAAATCTCTTTTTAGGCCATACCCATGGA
GTCTGCTAATCTCCAACATCAACTTCAAGAACTCTTTGTTGGATATTCTTCTTTGGTATCAGCTCCAAGAACAGCTCCCATCACTCATGAATGCAACCCCAATATCATTT
TGGACGGAAATTCCTACAATAACCCTTATTTAGTGGATCAAAGCTTACAATGTTCATCAAGGGAGAATGATCAGAATGTATGGTTTAATTTCTCATCAACTTACCAACAA
CAACCCAACGAACAGCAACTTTCAACTCTTTATTCTTCTGTTCAATCTCCAGCAAGTTATGGAGGTTTTCAAGGGATATCAGCTGGATCCAACACCAATTATTACACCAA
TAATGTTTTTTCGAGCAGTTCAAGGAATAATAATAGTAATAGTAGTAGTAGTACTTCAACGTTGGATTTGTTGTCTTCATCATCATTTTCAAGTTCCATGGGCTACAATT
TACAGGCTGCTGATCATCATCATTTGGATTTTCTATCAACCCCAAATTATTCAAGTGGTTTTAGCAAAAATAGAGCTCTATTTGGCTATGGCGCTCATCAACATCATCAT
GTCCAAGATTCAATTAATAATAACAACAGCCCATCAAACAGCTCCAATAAAACTTCATCATCAAGTGTTGCAAGAGCAAAGAGGCCAGTTAACAGCATGTCTGAGCCTAA
AAAGTCAAATAATCCAGAATCTAAGAAATCTTGCTCCACTTCAAGATCCTCTTGCCCACCATTAAAGGTGAGAAAAGAGAAATTGGGAGACAGGATTTCAGCACTTCAAA
GGCTGGTTGCACCTTTTGGTAAGACTGATACTTCCTCAGTTCTAACCGAAGCAATTGGCTACATTCAGTTTCTTCATGACCAAGTTGAGACTTTAAGCATGCCATATTTG
GGGTCCTCTCAGAGCAAACCCTACCAAAAACAGCAGCCTGCTTCGATCCCGGAGGATGGAACAAAACCAAGGCAAGATCTTAGAAGCAGAGGGCTATGCCTTATGCCACT
TTCCTACGCTTCATTCATTCATGGTTTTGATTGAGAGAGAGAATCAAAGATTTGAAAATTATTTCATCAACGAAAGAAAGAAAAGGGCTCAGCCCCCCCCCCCCCCCCCC
ACCAAAAAAAAAG
Protein sequenceShow/hide protein sequence
MESANLQHQLQELFVGYSSLVSAPRTAPITHECNPNIILDGNSYNNPYLVDQSLQCSSRENDQNVWFNFSSTYQQQPNEQQLSTLYSSVQSPASYGGFQGISAGSNTNYY
TNNVFSSSSRNNNSNSSSSTSTLDLLSSSSFSSSMGYNLQAADHHHLDFLSTPNYSSGFSKNRALFGYGAHQHHHVQDSINNNNSPSNSSNKTSSSSVARAKRPVNSMSE
PKKSNNPESKKSCSTSRSSCPPLKVRKEKLGDRISALQRLVAPFGKTDTSSVLTEAIGYIQFLHDQVETLSMPYLGSSQSKPYQKQQPASIPEDGTKPRQDLRSRGLCLM
PLSYASFIHGFD