; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G20390 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G20390
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHistone H1
Genome locationClcChr01:32345999..32347612
RNA-Seq ExpressionClc01G20390
SyntenyClc01G20390
Gene Ontology termsGO:0006334 - nucleosome assembly (biological process)
GO:0016584 - nucleosome positioning (biological process)
GO:0030261 - chromosome condensation (biological process)
GO:0045910 - negative regulation of DNA recombination (biological process)
GO:0000786 - nucleosome (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0003690 - double-stranded DNA binding (molecular function)
GO:0008168 - methyltransferase activity (molecular function)
GO:0031492 - nucleosomal DNA binding (molecular function)
InterPro domainsIPR005818 - Linker histone H1/H5, domain H15
IPR005819 - Linker histone H1/H5
IPR036388 - Winged helix-like DNA-binding domain superfamily
IPR036390 - Winged helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8647604.1 hypothetical protein Csa_003640 [Cucumis sativus]2.7e-7487.38Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEA           V+VPA EEPKE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAAK
        LALQLKNSTAKGKLTKIKASYKLSETGKKKD +ATKVAKANAEKKTKQARTTRTTGRKRKAVK +E    A KKVVAKKPKRSTPAKPKQPKSIK+PAAK
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAAK

Query:  RAKKAV
        RAKKAV
Subjt:  RAKKAV

XP_004134874.1 histone H1 [Cucumis sativus]3.8e-8192.27Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MSSTGE AEVKVPAEDV PVEVPA EEPKE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA
        ILALQLKNSTAKGKLTKIKASYKLSETGKKKD +ATKVAKANAEKKTKQARTTRTTGRKRKAVK +E    A KKVVAKKPKRSTPAKPKQPKSIK+PAA
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA

Query:  KRAKKAV
        KRAKKAV
Subjt:  KRAKKAV

XP_008440801.1 PREDICTED: histone H1 [Cucumis melo]4.2e-8091.83Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EEPKE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA
        KILALQLKNSTAKGKLTKIKASYKLSE GKKKDK+ATKVAKANAEK TKQARTTRTTGRKRKAVKK+E    A KKVVAKKPKRSTPAKPKQPKSIK+PA
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKKAV
        AKRAKKAV
Subjt:  AKRAKKAV

XP_022950733.1 histone H1 [Cucurbita moschata]2.1e-7184.95Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAEVKVPAED P VEVP+AEE KEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEKKTKQARTTR T  KRK   A K  +A KKVVAKKPKR+TPAKPKQPKSI++PAAKR
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR

Query:  AKKAVA
        AKKAVA
Subjt:  AKKAVA

XP_038883821.1 histone H1 [Benincasa hispida]8.0e-8793.33Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSS GEAEVKVPAEDVPPV VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA-------KKVVAKKPKRSTPAKPKQPKSIKAP
        L+LQLKNSTAKGKLTKIKASYKLSETGKKKDK+ATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA       KKVVAKKPKRSTPAKPK PKSI++P
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA-------KKVVAKKPKRSTPAKPKQPKSIKAP

Query:  AAKRAKKAVA
        AAKRAKKAVA
Subjt:  AAKRAKKAVA

TrEMBL top hitse value%identityAlignment
A0A0A0KJB6 Histone H11.9e-8192.27Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
        MSSTGE AEVKVPAEDV PVEVPA EEPKE EK PVKEKKPRA REKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK
Subjt:  MSSTGE-AEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRK

Query:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA
        ILALQLKNSTAKGKLTKIKASYKLSETGKKKD +ATKVAKANAEKKTKQARTTRTTGRKRKAVK +E    A KKVVAKKPKRSTPAKPKQPKSIK+PAA
Subjt:  ILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPAA

Query:  KRAKKAV
        KRAKKAV
Subjt:  KRAKKAV

A0A1S3B1Z2 histone H12.0e-8091.83Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EEPKE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA
        KILALQLKNSTAKGKLTKIKASYKLSE GKKKDK+ATKVAKANAEK TKQARTTRTTGRKRKAVKK+E    A KKVVAKKPKRSTPAKPKQPKSIK+PA
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKKAV
        AKRAKKAV
Subjt:  AKRAKKAV

A0A5A7SK97 Histone H12.0e-8091.83Show/hide
Query:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
        M+STGE AEVKVPAEDV PVE VPA EEPKE EK PVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR
Subjt:  MSSTGE-AEVKVPAEDVPPVE-VPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFR

Query:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA
        KILALQLKNSTAKGKLTKIKASYKLSE GKKKDK+ATKVAKANAEK TKQARTTRTTGRKRKAVKK+E    A KKVVAKKPKRSTPAKPKQPKSIK+PA
Subjt:  KILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDE----AAKKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKKAV
        AKRAKKAV
Subjt:  AKRAKKAV

A0A6J1GFQ2 histone H11.0e-7184.95Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGEAEVKVPAED P VEVP+AEE KEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEKKTKQARTTR T  KRK   A K  +A KKVVAKKPKR+TPAKPKQPKSI++PAAKR
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR

Query:  AKKAVA
        AKKAVA
Subjt:  AKKAVA

A0A6J1IMR2 histone H11.7e-7183.98Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        MSSTGE EVKVPAED P  EVP+AEEPKEAEK PV+EKK R PREKKPRQSKVASHPPYFQMI EAI+SLNEKNGSSPYAIAKYMEEKHK VLPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR
        LALQLKNSTAKGKL KIKASY+LSE G KKDK A+KVAKANAEK TKQARTTR T  KRK   A K  +A KKVVAKKPKR+TPAKPKQPKSI++PAAKR
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRK---AVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKR

Query:  AKKAVA
        AKKAVA
Subjt:  AKKAVA

SwissProt top hitse value%identityAlignment
P08283 Histone H15.3e-1745.41Show/hide
Query:  EVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA
        EVP  EEPK   +   K K  +  +  KPR    ASHP Y +MI +AI SL EKNGSS YAIAK++EEK K  LPANF+K+L   LK + A GKL K+K 
Subjt:  EVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKA

Query:  SYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAK--KVVAKKPKRSTPAKPKQPKSIKAPAAKRAKKAV
        S+KLS   K   K A    KA    K K  +       K KAV K + A   K VA KPK++  AKPK   +   P A + K  V
Subjt:  SYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAK--KVVAKKPKRSTPAKPKQPKSIKAPAAKRAKKAV

P23444 Histone H16.9e-1741.59Show/hide
Query:  STGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILA
        +T   E   P  D  P     A     A+    K KK  AP+++        +H PY +M++EAI+SL E+ GSS YAIAK++E+KHKA LP NFRK+L 
Subjt:  STGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILA

Query:  LQLKNSTAKGKLTKIKASYKLSETGK--KKDKDATKVAKANAEKKTKQAR-TTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKA-------
        +QLK   A GKLTK+K SYKLS   K   K K A K  K  A+K    A+   +T  + + A K   AAK     KPK  TPAKPK   + KA       
Subjt:  LQLKNSTAKGKLTKIKASYKLSETGK--KKDKDATKVAKANAEKKTKQAR-TTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKA-------

Query:  ---PAAKRAKKAVA
           P AK+A +A A
Subjt:  ---PAAKRAKKAVA

P27806 Histone H11.2e-1644.12Show/hide
Query:  AEVKVPAEDV---PPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        A++ VP  +V     V+ PAA   K A+ P   + K   P  KKPR +   +HP Y +M++EAI++L E++GSS  AI K++E+KHKA LPANFRKIL  
Subjt:  AEVKVPAEDV---PPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKLSET-GKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEA---AKKVVAKKPKRSTPAKPKQPKSIKAPAAKRAK
        Q+K   A GKLTK+K SYKL++     K K ATK   A   K    A+ T      +KA  K +A   AK     KPK +  AKPK     KA AA  AK
Subjt:  QLKNSTAKGKLTKIKASYKLSET-GKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEA---AKKVVAKKPKRSTPAKPKQPKSIKAPAAKRAK

Query:  KAVA
        KA A
Subjt:  KAVA

P40267 Histone H11.1e-4358.25Show/hide
Query:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI
        M++ GE E        P V     E  K  E+ P  +KKPRAP+EKKP+ +K  +HPPYFQMI EA+ +LNEK GSSPYA+AKYME+KHK  LPANFRKI
Subjt:  MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKI

Query:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDAT---KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA---KKVVAKKPKRSTPAKPKQPKSIKAPA
        L LQLKNS AKGKL KIKASYKLSE GKK+    T   K+ KA+++KK +  R T T  +K +  KK +A    KKV AK+ ++STPAK KQPKSIK+PA
Subjt:  LALQLKNSTAKGKLTKIKASYKLSETGKKKDKDAT---KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAA---KKVVAKKPKRSTPAKPKQPKSIKAPA

Query:  AKRAKK
        AKRAKK
Subjt:  AKRAKK

Q08864 Histone H1-I1.7e-1540.87Show/hide
Query:  MSSTGEAEVKVP-AEDVPPVEVPAAEEPK----EAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVLP
        MS T  A V  P AE  P  E P A+ PK    +  K P   K+P+AP+EKKP+ +   +HPPY +M+ +AI++L E+NGSS  A+ K++E K+ K +  
Subjt:  MSSTGEAEVKVP-AEDVPPVEVPAAEEPK----EAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKH-KAVLP

Query:  ANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDAT-KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAP
         NF K L+  +K     GKL K+K S+KLSE  K K K +T K AKA+ E K K+   +    +K +AVKK +A K+ V ++PK+    K ++ K+   P
Subjt:  ANFRKILALQLKNSTAKGKLTKIKASYKLSETGKKKDKDAT-KVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAP

Query:  AAKRAKKA
         A++ KKA
Subjt:  AAKRAKKA

Arabidopsis top hitse value%identityAlignment
AT1G06760.1 winged-helix DNA-binding transcription factor family protein2.8e-1340.1Show/hide
Query:  GEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ
        G      P  D    + PAA+  K      VKEKK  A     P++  V+SHP Y +MI +AI +L E+ GSS YAI K++EEK K  LP  FRK+L L 
Subjt:  GEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQ

Query:  LKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPK----RSTPAKPKQPKSIKAPAAKRAKK
        LK   A GKL K+KAS+KL     K    + K A   +    K+  T   T  KRK V     AKK +A KPK    +   AK K     +A AA   +K
Subjt:  LKNSTAKGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPK----RSTPAKPKQPKSIKAPAAKRAKK

Query:  AV
        AV
Subjt:  AV

AT2G18050.1 histone H1-33.1e-2851.79Show/hide
Query:  RAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKDATK
        + P  KKPR+ K  +HPPYFQMI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T K    ++DK   K
Subjt:  RAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKDATK

Query:  VAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA
          K   ++ TK+ R++ T  +K  +V K E  +KV           K +QPKSIK+    K+A KA A
Subjt:  VAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA

AT2G18050.2 histone H1-31.1e-2051.02Show/hide
Query:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKDATKVAKANAEKKTKQARTTRTTGR
        MI EA+  L EKNGSSPYAIAK +EEKHK++LP +FRK L+LQLKNS AKGKL KI+ASYKLS+T K    ++DK   K  K   ++ TK+ R++ T  +
Subjt:  MINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTAKGKLTKIKASYKLSETGK----KKDKDATKVAKANAEKKTKQARTTRTTGR

Query:  KRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA
        K  +V K E  +KV           K +QPKSIK+    K+A KA A
Subjt:  KRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAA-KRAKKAVA

AT2G30620.1 winged-helix DNA-binding transcription factor family protein5.4e-0938.1Show/hide
Query:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        +G A+  V + +  P       +     K   K  K  AP +KK      +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L +
Subjt:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKL----SETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAK-----KPK-RSTPAKPKQPKSIKAP
         LK   A  KL K+KAS+K+    S    K      K A   A+ K K A        K  A    + A KVVAK     KPK + T AKPK     K+ 
Subjt:  QLKNSTAKGKLTKIKASYKL----SETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAK-----KPK-RSTPAKPKQPKSIKAP

Query:  AAKRAKKAVA
        AA    KAVA
Subjt:  AAKRAKKAVA

AT2G30620.2 winged-helix DNA-binding transcription factor family protein2.9e-1038.86Show/hide
Query:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL
        +G A+  V + +  P       +     K   K  K  AP +KK      +SHP Y +MI +AI +L E+ GSS YAI K++EEKHK+ LP  FRK+L +
Subjt:  TGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILAL

Query:  QLKNSTAKGKLTKIKASYKL-SETGKKKDKDATKV-AKANAEKKTKQART-TRTTGRKRKA--VKKDEAAKKVVAKKPKRSTPAKPKQPKSIK
         LK   A  KL K+KAS+K+ S       K A  V  KA    K K +RT TRT+  K+ A   KK    KK  AK  K  +PAK    +  K
Subjt:  QLKNSTAKGKLTKIKASYKL-SETGKKKDKDATKV-AKANAEKKTKQART-TRTTGRKRKA--VKKDEAAKKVVAKKPKRSTPAKPKQPKSIK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGTCAACCGGAGAGGCTGAAGTTAAAGTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCCGAAGGAGGCTGAGAAGCCGCCGGTGAAGGA
GAAGAAACCTAGGGCTCCGAGGGAGAAGAAGCCTAGGCAGTCTAAAGTTGCTTCACATCCACCGTACTTTCAGATGATTAATGAAGCAATCTCGTCGCTCAACGAGAAGA
ATGGATCGAGTCCGTACGCTATAGCCAAATACATGGAGGAGAAACACAAGGCGGTTCTTCCTGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCCACCGCT
AAAGGAAAATTAACGAAGATCAAGGCATCGTATAAGCTGTCCGAAACGGGAAAGAAAAAGGACAAGGACGCAACGAAGGTGGCAAAAGCGAACGCAGAGAAGAAAACTAA
ACAAGCAAGAACGACGAGAACTACCGGAAGGAAGAGGAAGGCGGTGAAGAAGGACGAGGCGGCGAAGAAGGTTGTTGCAAAGAAACCGAAAAGATCAACTCCGGCGAAGC
CAAAACAGCCGAAATCAATTAAGGCCCCTGCTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAG
mRNA sequenceShow/hide mRNA sequence
TTTTAATCTTCACTTTGTCTTCTTTAATCTCTTCAAAATGGCTCTAAATTAATCAAAGTAACTTCCATTTAGTTGCCAATTCAAATTAATAGAGAAAACACAAAGTCTCT
TCATTTCCTTTGTATCAAAATGCAAGGAAAAACAAACCCTCGTTTGTATTTATCCGAATATCGTCTCCCTTCAGGATTTGGGCCTCATAATAACGATCCGTTCTTTTCCA
CGTGTGCGCTCCAGATCTTTCTTTAGTACAACTTGGCTATCCGTGTCCACTCGGACTGGCCAATCACAGCTCGTTTTTCCCTCCACATCCAGATTCTTCTTCCCCTATAA
CTGCCTCGGAGCAGTCCTCCGTCTCGAGCATATTCGCTGAGCGTTTGCTTCTCGTTCTGTAGTTTGTGAAAATTTTGATCATGTCGTCAACCGGAGAGGCTGAAGTTAAA
GTTCCGGCGGAGGATGTTCCTCCTGTGGAGGTTCCGGCTGCAGAGGAGCCGAAGGAGGCTGAGAAGCCGCCGGTGAAGGAGAAGAAACCTAGGGCTCCGAGGGAGAAGAA
GCCTAGGCAGTCTAAAGTTGCTTCACATCCACCGTACTTTCAGATGATTAATGAAGCAATCTCGTCGCTCAACGAGAAGAATGGATCGAGTCCGTACGCTATAGCCAAAT
ACATGGAGGAGAAACACAAGGCGGTTCTTCCTGCGAATTTCAGGAAAATCTTGGCTCTTCAATTGAAGAATTCCACCGCTAAAGGAAAATTAACGAAGATCAAGGCATCG
TATAAGCTGTCCGAAACGGGAAAGAAAAAGGACAAGGACGCAACGAAGGTGGCAAAAGCGAACGCAGAGAAGAAAACTAAACAAGCAAGAACGACGAGAACTACCGGAAG
GAAGAGGAAGGCGGTGAAGAAGGACGAGGCGGCGAAGAAGGTTGTTGCAAAGAAACCGAAAAGATCAACTCCGGCGAAGCCAAAACAGCCGAAATCAATTAAGGCCCCTG
CTGCGAAGAGGGCTAAGAAAGCGGTTGCGGGAATGTAGAGTAGAGTTTGAAGAAGTTGTCTTTGAATTTTCTTCTGTGAATATGTTGCTTACGAGTTACGATCATGTAGT
GTGTAAATTCTGGGATCTTGCGATCTTTTAGTTTTTGCTTTAACTGCAATGGGAATAAATCCTTTCATGTTCAGAATTTCAATTCTATTCAAATTCATCCTTTGAATTGG
AGACACATGGCTTTGGTTTTCCGTTGAATTAGAACGGAGAATCAATAGAAACCTATAGATTTACATCAATTATTCAATTAGGATTCAGCTCATCTATGGCCTACGGTTCC
CATTCTCTGAGTCCTAATTTGGGAATATTGGACATTTTAATTCAGAGTTGGAAGGAGAAGAACACAAACGAGTTTGTCAGTGAGTGGTTGTATCACGATATCTATGTCAT
CATCCTATACCTTATTTTCAAAACAGAAGAAAAGTGATCTTGAAACTTTTATTTTAATTTTTTGCCAATTAATCCATTTTAGGAAACTTAGAAATCCTTGT
Protein sequenceShow/hide protein sequence
MSSTGEAEVKVPAEDVPPVEVPAAEEPKEAEKPPVKEKKPRAPREKKPRQSKVASHPPYFQMINEAISSLNEKNGSSPYAIAKYMEEKHKAVLPANFRKILALQLKNSTA
KGKLTKIKASYKLSETGKKKDKDATKVAKANAEKKTKQARTTRTTGRKRKAVKKDEAAKKVVAKKPKRSTPAKPKQPKSIKAPAAKRAKKAVAGM