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Clc01G20510 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G20510
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransducin/WD40 repeat-like superfamily protein
Genome locationClcChr01:32416021..32416745
RNA-Seq ExpressionClc01G20510
SyntenyClc01G20510
Gene Ontology termsGO:0009626 - plant-type hypersensitive response (biological process)
GO:0010337 - regulation of salicylic acid metabolic process (biological process)
GO:2000031 - regulation of salicylic acid mediated signaling pathway (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025678.1 Transducin/WD40 repeat-like superfamily protein [Cucumis melo var. makuwa]2.2e-4585.47Show/hide
Query:  MAEKTRRVHRKTKAPANLCLRKPRG-DATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF
        MAEK+RRV RK K PANLCLRKPR  DA KNNK  +AMTLFERLREAVFRFIMLCALSKATNHHP  GAAFQDDVVVRRRH+YPNVDHHHSEAVADCIEF
Subjt:  MAEKTRRVHRKTKAPANLCLRKPRG-DATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF

Query:  IKMKAYSDD-EIILDRG
        IKMKAYSDD E+IL  G
Subjt:  IKMKAYSDD-EIILDRG

KAB1201821.1 hypothetical protein CJ030_MR8G020135 [Morella rubra]9.9e-1446.56Show/hide
Query:  EKTRRVHRKTKAPANLCLRKPRGDATKN--NKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFI
        EK +   RK K   +LC+ + R ++  N  NKA + MTL ER REAVFR IML A+SKATNH      A        +R  YPN D HHSEAVA+CIEFI
Subjt:  EKTRRVHRKTKAPANLCLRKPRGDATKN--NKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFI

Query:  KMKAYSDDEIILDRGSVDVDDDMAVSVPVPV
        K KA +D+E      S  +       +PVPV
Subjt:  KMKAYSDDEIILDRGSVDVDDDMAVSVPVPV

KAG2694204.1 hypothetical protein I3760_08G130700 [Carya illinoinensis]4.4e-1453.64Show/hide
Query:  EKTRRVHRKTKAPANLCLRKPRGD---ATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF
        EK     RK K  ++LC+ + RG+   A KNNK+ + MTL ER REAV R IML ALSKAT+H     A  Q      RR  YPN D HHSEAVADCIEF
Subjt:  EKTRRVHRKTKAPANLCLRKPRGD---ATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF

Query:  IKMKAYSDDE
        IK  A +D+E
Subjt:  IKMKAYSDDE

KAG6603914.1 hypothetical protein SDJN03_04523, partial [Cucurbita argyrosperma subsp. sororia]3.8e-4277.27Show/hide
Query:  MAEKTRRVHRKTKAPANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFI
        MAEKTRRV  K K          RGD  KN+KA  AMTLFERLREAVFRFIMLCALSKATNHH A GA FQDD VVRRR +Y N DHHHSEAVADCIEFI
Subjt:  MAEKTRRVHRKTKAPANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFI

Query:  KMKAYSDDEIILDRGSVDVDDDMAVSVPVPVR
        K KAYSDD+IILDRGSVD DDDMAVSVP+PVR
Subjt:  KMKAYSDDEIILDRGSVDVDDDMAVSVPVPVR

KGN49339.2 hypothetical protein Csa_003207 [Cucumis sativus]9.8e-5485.07Show/hide
Query:  MAEKTRRVHRKTKAPANLCLRKPR-GDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF
        MAEK+RRV RK K P NLCLRKPR GDA K  K  + MTLFERLREAVFRFIMLCALSKATNHHPA GA FQDDVVVRRRH+YPNVDHHHSEAVADCIEF
Subjt:  MAEKTRRVHRKTKAPANLCLRKPR-GDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF

Query:  IKMKAYSDDEIILDRGSV-DVDDDMAVSVPVPVR
        IKMKAYSDDE+ILDRGSV D DDDM VSVPVPVR
Subjt:  IKMKAYSDDEIILDRGSV-DVDDDMAVSVPVPVR

TrEMBL top hitse value%identityAlignment
A0A0A0KGN3 Uncharacterized protein4.7e-5485.07Show/hide
Query:  MAEKTRRVHRKTKAPANLCLRKPR-GDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF
        MAEK+RRV RK K P NLCLRKPR GDA K  K  + MTLFERLREAVFRFIMLCALSKATNHHPA GA FQDDVVVRRRH+YPNVDHHHSEAVADCIEF
Subjt:  MAEKTRRVHRKTKAPANLCLRKPR-GDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF

Query:  IKMKAYSDDEIILDRGSV-DVDDDMAVSVPVPVR
        IKMKAYSDDE+ILDRGSV D DDDM VSVPVPVR
Subjt:  IKMKAYSDDEIILDRGSV-DVDDDMAVSVPVPVR

A0A1R3IPX3 Uncharacterized protein3.1e-1346.55Show/hide
Query:  ANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRG
        + LC+  PR  +   NK  + MTL +R REAVFR IML AL+KA++H     AA         R  YP  D HHSEAVADCIEFIK KAY+D+       
Subjt:  ANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEIILDRG

Query:  SVDVDDDMAVSVPVPV
        S ++D    V++PV V
Subjt:  SVDVDDDMAVSVPVPV

A0A5A7SHP0 Transducin/WD40 repeat-like superfamily protein1.1e-4585.47Show/hide
Query:  MAEKTRRVHRKTKAPANLCLRKPRG-DATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF
        MAEK+RRV RK K PANLCLRKPR  DA KNNK  +AMTLFERLREAVFRFIMLCALSKATNHHP  GAAFQDDVVVRRRH+YPNVDHHHSEAVADCIEF
Subjt:  MAEKTRRVHRKTKAPANLCLRKPRG-DATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEF

Query:  IKMKAYSDD-EIILDRG
        IKMKAYSDD E+IL  G
Subjt:  IKMKAYSDD-EIILDRG

A0A5C7HUV3 Uncharacterized protein4.8e-1446.43Show/hide
Query:  EKTRRVHRKTKAPANLC---LRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATN---HHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADC
        EK R   RK K   NLC   L K   +    NK    +TL ER REAVFR IML ALSKATN   HH  G +          R  Y   D HHSEAVADC
Subjt:  EKTRRVHRKTKAPANLC---LRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATN---HHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADC

Query:  IEFIKMKAYSDDEIILDRG-----SVDVDDDMAVSVPVPV
        IEFIK KA +DD    + G     S  +DD   + +PVPV
Subjt:  IEFIKMKAYSDDEIILDRG-----SVDVDDDMAVSVPVPV

A0A6A1UNG7 Uncharacterized protein4.8e-1446.56Show/hide
Query:  EKTRRVHRKTKAPANLCLRKPRGDATKN--NKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFI
        EK +   RK K   +LC+ + R ++  N  NKA + MTL ER REAVFR IML A+SKATNH      A        +R  YPN D HHSEAVA+CIEFI
Subjt:  EKTRRVHRKTKAPANLCLRKPRGDATKN--NKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFI

Query:  KMKAYSDDEIILDRGSVDVDDDMAVSVPVPV
        K KA +D+E      S  +       +PVPV
Subjt:  KMKAYSDDEIILDRGSVDVDDDMAVSVPVPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCAT
GACTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACG
TCGTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATA
ATTCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAA
mRNA sequenceShow/hide mRNA sequence
AAAAGACTTGTCCTATGCCATGGATTCTCATATAAACTACAAAAAAACCAACGCCCCCTTCCCTTAAAAAACGACCAAGTGGTTCAATTCAGTAAAATCAAATTAGCAAT
GGCCGAAAAAACAAGACGAGTCCACCGAAAGACGAAGGCGCCGGCCAATCTCTGCCTCCGAAAGCCAAGAGGCGACGCCACGAAGAACAACAAGGCCGCGGCGGCCATGA
CTCTGTTTGAACGCCTCCGCGAGGCTGTTTTTCGTTTTATAATGCTATGTGCTCTCTCAAAGGCCACAAATCATCATCCCGCCGGCGGAGCCGCCTTCCAGGACGACGTC
GTCGTTAGGCGGCGACACGCATACCCAAACGTCGACCACCACCACAGCGAAGCCGTCGCCGATTGCATCGAATTCATCAAGATGAAGGCGTATTCCGACGACGAAATAAT
TCTTGACCGTGGATCGGTGGACGTCGATGATGATATGGCGGTGTCGGTGCCGGTGCCGGTCAGGTAAAGTGCAGGGGATTGTTAGCAATTGGCCTGCATTTAAATTTAGG
GAGTTTGTGTGTTTGAAATTTAATGTATTATTCGGTTTTAGAATTTGGTTTTTGTGTAGGACGTGTAAAATATATTGGAAAATAGACGACTTTATAAATTGGCGTGTAAA
GAAATTTCACGTGGATACCTTTTCATAAAAATATTTATGTGCATCGTTGATGTGGTTGCGAACTA
Protein sequenceShow/hide protein sequence
MAEKTRRVHRKTKAPANLCLRKPRGDATKNNKAAAAMTLFERLREAVFRFIMLCALSKATNHHPAGGAAFQDDVVVRRRHAYPNVDHHHSEAVADCIEFIKMKAYSDDEI
ILDRGSVDVDDDMAVSVPVPVR