; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G21280 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G21280
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionB-like cyclin
Genome locationClcChr01:32919020..32919487
RNA-Seq ExpressionClc01G21280
SyntenyClc01G21280
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0044772 - mitotic cell cycle phase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsIPR006671 - Cyclin, N-terminal
IPR013763 - Cyclin-like
IPR036915 - Cyclin-like superfamily
IPR039361 - Cyclin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603864.1 hypothetical protein SDJN03_04473, partial [Cucurbita argyrosperma subsp. sororia]1.0e-4277.1Show/hide
Query:  MEDIAE-GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLA
        MEDIAE  +DPVIDIDS+DSENPLAVVE  DD +  +       ++NSSCVPPNYM KQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFL+
Subjt:  MEDIAE-GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLA

Query:  EKTLARKKLQLVGLVSMLLACKYEEVFVPVV
        +KT+ RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  EKTLARKKLQLVGLVSMLLACKYEEVFVPVV

XP_008440906.1 PREDICTED: G2/mitotic-specific cyclin-2-like [Cucumis melo]2.4e-4478.12Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDIAE EDP+IDID +DS+NPLAVVE   ++    A    ++NSSCVPPNYMTKQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFLA+KT
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

XP_011658071.1 G2/mitotic-specific cyclin-2 [Cucumis sativus]3.1e-4478.91Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDIAE EDPVIDID IDS NPLAVVE   ++    A    ++NSSCVPPNYMTKQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFLA+K+
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

XP_022977296.1 G2/mitotic-specific cyclin-2-like isoform X1 [Cucurbita maxima]1.3e-4276.52Show/hide
Query:  MEDIAE--GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFL
        MEDIAE   +DPVIDIDS+DSENPLAVVE  DD +  +       ++NSSCVPPNYM KQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFL
Subjt:  MEDIAE--GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFL

Query:  AEKTLARKKLQLVGLVSMLLACKYEEVFVPVV
        ++KT+ RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  AEKTLARKKLQLVGLVSMLLACKYEEVFVPVV

XP_038883043.1 G2/mitotic-specific cyclin-2-like [Benincasa hispida]6.9e-4477.34Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDIAE EDPVI+ID++DS+NPLAVVE   ++    A    +++SSCVPPNYMTKQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFLA+KT
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

TrEMBL top hitse value%identityAlignment
A0A0A0KJL7 B-like cyclin1.5e-4478.91Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDIAE EDPVIDID IDS NPLAVVE   ++    A    ++NSSCVPPNYMTKQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFLA+K+
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

A0A1S3B1R5 B-like cyclin1.1e-4478.12Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDIAE EDP+IDID +DS+NPLAVVE   ++    A    ++NSSCVPPNYMTKQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFLA+KT
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

A0A5A7SKG2 B-like cyclin1.1e-4478.12Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDIAE EDP+IDID +DS+NPLAVVE   ++    A    ++NSSCVPPNYMTKQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFLA+KT
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

A0A6J1II22 B-like cyclin6.3e-4376.52Show/hide
Query:  MEDIAE--GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFL
        MEDIAE   +DPVIDIDS+DSENPLAVVE  DD +  +       ++NSSCVPPNYM KQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFL
Subjt:  MEDIAE--GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFL

Query:  AEKTLARKKLQLVGLVSMLLACKYEEVFVPVV
        ++KT+ RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  AEKTLARKKLQLVGLVSMLLACKYEEVFVPVV

A0A6J1IJH9 B-like cyclin6.3e-4376.52Show/hide
Query:  MEDIAE--GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFL
        MEDIAE   +DPVIDIDS+DSENPLAVVE  DD +  +       ++NSSCVPPNYM KQ DINEKMR ILIDWLIEVH KFDLMGETLFLTVNL DRFL
Subjt:  MEDIAE--GEDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFL

Query:  AEKTLARKKLQLVGLVSMLLACKYEEVFVPVV
        ++KT+ RKKLQLVGLVSMLLACKYEEV VPVV
Subjt:  AEKTLARKKLQLVGLVSMLLACKYEEVFVPVV

SwissProt top hitse value%identityAlignment
P30278 G2/mitotic-specific cyclin-2 (Fragment)1.4e-3464.84Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDI EGE  ++DIDS D+ N LAVVE   +I    A+   ++   CV P YM +Q D+NE+MR IL+DWLIEVH KFDLM ETLFLTVNL DRFLA++ 
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLV+MLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

P46277 G2/mitotic-specific cyclin-12.5e-3664.84Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDI   E+PV+DID+ D+ +PLAV E   +I    ++   V+++SCV PNYM +Q DINE+MR IL+DWLIEVH KFDLM ETLFLTVNL DRFL +++
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLV+MLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

P46278 G2/mitotic-specific cyclin-21.4e-3464.84Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MEDI EGE  ++DIDS D+ N LAVVE   +I    A+   ++   CV P YM +Q D+NE+MR IL+DWLIEVH KFDLM ETLFLTVNL DRFLA++ 
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLV+MLLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

Q39068 Cyclin-B2-12.1e-3562.5Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MED+   E+P++DID +DS+N LA VE   ++    AF   ++  SCVP +YM +Q D+NEKMR ILIDWLIEVH KFDL+ ETLFLTVNL DRFL+++ 
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLV++LLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

Q9LDM4 Cyclin-B2-34.7e-3561.72Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MED  + E+PVIDID+ D  NPLA VE   +I     F    +  SCVPPNYM  Q D+NE+MR ILIDWLIEVH KF+LM ETL+LT+N+ DRFLA   
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVG+ ++LLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

Arabidopsis top hitse value%identityAlignment
AT1G20610.1 Cyclin B2;33.3e-3661.72Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MED  + E+PVIDID+ D  NPLA VE   +I     F    +  SCVPPNYM  Q D+NE+MR ILIDWLIEVH KF+LM ETL+LT+N+ DRFLA   
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVG+ ++LLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

AT1G76310.1 CYCLIN B2;45.3e-3464Show/hide
Query:  AEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLA-EKTLAR
        AE E+ V+DIDS D  NPL+VVE   +I     F    +  SCVPPNYM  Q DINE+MR IL DWLIEVH KF+LM ETL+LT+NL DRFLA  + +AR
Subjt:  AEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLA-EKTLAR

Query:  KKLQLVGLVSMLLACKYEEVFVPVV
        KKLQLVG+ +MLLACKYEEV VPVV
Subjt:  KKLQLVGLVSMLLACKYEEVFVPVV

AT2G17620.1 Cyclin B2;11.5e-3662.5Show/hide
Query:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT
        MED+   E+P++DID +DS+N LA VE   ++    AF   ++  SCVP +YM +Q D+NEKMR ILIDWLIEVH KFDL+ ETLFLTVNL DRFL+++ 
Subjt:  MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKT

Query:  LARKKLQLVGLVSMLLACKYEEVFVPVV
        + RKKLQLVGLV++LLACKYEEV VPVV
Subjt:  LARKKLQLVGLVSMLLACKYEEVFVPVV

AT2G26760.1 Cyclin B1;41.8e-2651.61Show/hide
Query:  EDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKTLARKK
        +D VIDID++D+ N LA VE  +D F F+ T     V+    +  +Y+  Q +INEKMR+ILIDWL++VH KF+LM ETL+LT+NL DRFL+   + R++
Subjt:  EDPVIDIDSIDSENPLAVVE--DDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKTLARKK

Query:  LQLVGLVSMLLACKYEEVFVPVVH
        LQL+GL +ML+ACKYEE++ P V+
Subjt:  LQLVGLVSMLLACKYEEVFVPVVH

AT4G35620.1 Cyclin B2;24.8e-3561.24Show/hide
Query:  MEDI-AEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEK
        MED+  E E+PV+DID  D+ N LA VE   ++     F    +  SCVP +YM +Q DI++KMR ILIDWLIEVH KF+LM ETLFLTVNL DRFL+++
Subjt:  MEDI-AEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEK

Query:  TLARKKLQLVGLVSMLLACKYEEVFVPVV
         +ARKKLQLVGLV++LLACKYEEV VP+V
Subjt:  TLARKKLQLVGLVSMLLACKYEEVFVPVV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGATATAGCAGAAGGCGAAGACCCAGTAATCGACATCGACAGTATCGATTCCGAGAACCCGCTTGCCGTTGTTGAGGACGATCCCTTCATCTTTTTCTTTACAGC
TTTTTTGTGTTTGGTGCAGAATTCAAGTTGTGTTCCCCCAAATTACATGACCAAACAAACTGACATTAATGAGAAGATGAGAACTATACTAATTGACTGGCTTATAGAGG
TGCATGGCAAGTTTGATCTCATGGGAGAAACTTTGTTTCTCACTGTGAATCTCAGAGACAGATTTTTGGCAGAAAAAACATTAGCGAGAAAGAAGCTTCAGCTGGTTGGT
TTGGTTTCTATGCTTTTAGCTTGCAAATATGAGGAAGTTTTTGTTCCTGTTGTACATGGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGATATAGCAGAAGGCGAAGACCCAGTAATCGACATCGACAGTATCGATTCCGAGAACCCGCTTGCCGTTGTTGAGGACGATCCCTTCATCTTTTTCTTTACAGC
TTTTTTGTGTTTGGTGCAGAATTCAAGTTGTGTTCCCCCAAATTACATGACCAAACAAACTGACATTAATGAGAAGATGAGAACTATACTAATTGACTGGCTTATAGAGG
TGCATGGCAAGTTTGATCTCATGGGAGAAACTTTGTTTCTCACTGTGAATCTCAGAGACAGATTTTTGGCAGAAAAAACATTAGCGAGAAAGAAGCTTCAGCTGGTTGGT
TTGGTTTCTATGCTTTTAGCTTGCAAATATGAGGAAGTTTTTGTTCCTGTTGTACATGGGTGA
Protein sequenceShow/hide protein sequence
MEDIAEGEDPVIDIDSIDSENPLAVVEDDPFIFFFTAFLCLVQNSSCVPPNYMTKQTDINEKMRTILIDWLIEVHGKFDLMGETLFLTVNLRDRFLAEKTLARKKLQLVG
LVSMLLACKYEEVFVPVVHG