; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc01G21500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc01G21500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRas-related protein Rab-2A
Genome locationClcChr01:33063190..33065797
RNA-Seq ExpressionClc01G21500
SyntenyClc01G21500
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6594717.1 Ras-related protein RABB1c, partial [Cucurbita argyrosperma subsp. sororia]1.8e-9076.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGP+GGREGSSSQ GGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

KAG7026687.1 Ras-related protein RABB1c [Cucurbita argyrosperma subsp. argyrosperma]1.8e-9076.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGP+GGREGSSSQ GGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

XP_004134816.1 ras-related protein RABB1c [Cucumis sativus]9.0e-9076.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL+SWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGE FAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGPSG REGSS+QAGGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

XP_022926861.1 ras-related protein RABB1c-like [Cucurbita moschata]1.8e-9076.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGP+GGREGSSSQ GGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

XP_038883522.1 ras-related protein RABB1c-like [Benincasa hispida]6.9e-9076.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHLVSWLEDARQHANANMTIMLIGNK+DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGPSGGREGSSSQ  GCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

TrEMBL top hitse value%identityAlignment
A0A0A0KMV2 Uncharacterized protein4.3e-9076.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL+SWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGE FAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGPSG REGSS+QAGGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

A0A5A7SKE6 Ras-related protein RABB1c-like2.8e-8975.83Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL+SWLEDARQHANANMTIMLIGNKSDLAHRRAV+TEEGE FAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGPSG REGSSSQ GGCC+
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

A0A6A3D6A5 GTP-binding protein yptV42.2e-8974.48Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRPAKSHLGPSQGPTTEVPLVPCLSM
        MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIWDTV             P+    GP++G             
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRPAKSHLGPSQGPTTEVPLVPCLSM

Query:  ILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEVD
            L++RETFNHL SWLEDARQHANANMTIMLIGNKSDLAHRRAV+TEEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTAATI+ KIQDGVFDVSNE  
Subjt:  ILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEVD

Query:  THLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                 SYGIKVGYGGIPGPSGGR+GSSSQ GGCC+
Subjt:  THLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

A0A6J1EG19 ras-related protein RABB1c-like8.7e-9176.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGP+GGREGSSSQ GGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

A0A6J1KNY2 ras-related protein RABB1c-like8.7e-9176.67Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGL+FMEASAKTAQNVEEAFV+TAATIFKKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGYGGIPGP+GGREGSSSQ GGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

SwissProt top hitse value%identityAlignment
P36863 GTP-binding protein yptV45.5e-7463.64Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMI I+ K IKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLEDARQHAN NMTIMLIGNK DL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAF+ TA  I+KKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYG-GIPGPSGGR--EGSSSQAGGCC
                  SYGIKVGYG G  GP   +  EG + ++  CC
Subjt:  DTHLVSFYFDSYGIKVGYG-GIPGPSGGR--EGSSSQAGGCC

P49103 Ras-related protein Rab-2-A1.4e-8270.83Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLEDARQHANANMTIML+GNK DL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA  I+KKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGY  +PG SGG  GSSSQ GGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

P49104 Ras-related protein Rab-2-B1.3e-8370.83Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLEDARQHANANMTIML+GNK DL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTA  I+KKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
                  SYGIKVGY  IPG SGG   SSSQ GGCCS
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS

P92963 Ras-related protein RABB1c1.9e-9074.06Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLEDARQHANANMTIMLIGNK DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTAATI+KKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC
                  SYGIKVGYGGIPGPSGGR+GS+SQ GGCC
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC

Q38922 Ras-related protein RABB1b5.3e-7763.6Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLEDARQHAN NM+IMLIGNK DLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAF++TAA I + IQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC
                  S GIK+GYG   G +GGR+G+ SQ GGCC
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC

Arabidopsis top hitse value%identityAlignment
AT4G17160.1 RAB GTPase homolog B1A1.2e-6860.42Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAY FKYI+IGDTGVGKSCLLL+FTD RFQ VHDLTIGVEFGA+ ITI+NKPIKLQIWDT        G  S R   +S+     G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLE+ARQHA+ NMT MLIGNK DL  +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAFV+TAATI+K+IQDGV D +NE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSS-QAGGCC
                          G  PGP GG++ SSS Q  GCC
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSS-QAGGCC

AT4G17170.1 RAB GTPase homolog B1C1.3e-9174.06Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSYAYLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARMITI+NKPIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLEDARQHANANMTIMLIGNK DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTAATI+KKIQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC
                  SYGIKVGYGGIPGPSGGR+GS+SQ GGCC
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC

AT4G35860.1 GTP-binding 23.8e-7863.6Show/hide
Query:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS
        MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+T++ +PIKLQIWDT        G  S R   +S+   + G           +
Subjt:  MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLS

Query:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV
        +++  +  RETFNHL SWLEDARQHAN NM+IMLIGNK DLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAF++TAA I + IQDGVFDVSNE 
Subjt:  MILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEV

Query:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC
                  S GIK+GYG   G +GGR+G+ SQ GGCC
Subjt:  DTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC

AT4G35860.2 GTP-binding 28.7e-5156.48Show/hide
Query:  MITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLSMILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRA
        M+T++ +PIKLQIWDT        G  S R   +S+   + G           ++++  +  RETFNHL SWLEDARQHAN NM+IMLIGNK DLAH+RA
Subjt:  MITIENKPIKLQIWDTVFSILANLGVYSVRP-AKSHLGPSQGPTTEVPLVPCLSMILPGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRA

Query:  VSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEVDTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC
        VS EEG+QFAKEHGL+F+EASA+TAQNVEEAF++TAA I + IQDGVFDVSNE           S GIK+GYG   G +GGR+G+ SQ GGCC
Subjt:  VSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEVDTHLVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCC

AT5G45750.1 RAB GTPase homolog A1C2.0e-3135.44Show/hide
Query:  YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRPAKSHLGPSQGPTTEVPLVPCLSMIL
        Y YLFK ++IGD+GVGKS LL +FT N F      TIGVEF  R + +++K IK QIWDT     A    Y    +  + G               ++++
Subjt:  YAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRPAKSHLGPSQGPTTEVPLVPCLSMIL

Query:  PGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEVDTH
          +    TF ++ +WL++ R H + N+ +ML+GNKSDL H  AV TE+ + FA++  L FME SA  A NVE AF +    I   +     + ++E    
Subjt:  PGLILRETFNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEVDTH

Query:  LVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS
          S    S G K+          G++ S+ + GGCCS
Subjt:  LVSFYFDSYGIKVGYGGIPGPSGGREGSSSQAGGCCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTATGCTTACCTATTCAAATACATCGTCATCGGTGATACTGGAGTTGGGAAATCGTGTCTTCTCCTTCAGTTTACGGATAATCGATTTCAGCCTGTTCATGACTT
AACTATTGGGGTTGAATTCGGAGCCAGGATGATCACGATTGAGAATAAGCCAATTAAGCTGCAGATTTGGGATACGGTTTTTTCCATTTTGGCAAACCTCGGTGTTTATT
CAGTCAGGCCGGCCAAGAGTCATTTAGGTCCATCACAAGGTCCTACTACAGAGGTGCCGCTGGTGCCTTGCTTGTCTATGATATTACCAGGTCTTATTTTAAGGGAGACT
TTCAATCACTTGGTTAGCTGGCTAGAAGATGCAAGGCAGCATGCAAATGCAAACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAG
CACAGAAGAGGGTGAACAGTTCGCAAAGGAGCATGGTTTAATATTCATGGAGGCATCTGCCAAAACTGCCCAAAATGTCGAAGAGGCATTCGTAAAGACAGCCGCAACCA
TATTCAAGAAGATTCAAGATGGAGTATTTGACGTTTCAAATGAGGTTGACACCCATCTCGTATCTTTCTACTTCGATTCTTATGGAATCAAAGTTGGATATGGCGGGATA
CCAGGACCGTCAGGAGGCAGAGAGGGATCATCTTCCCAAGCTGGCGGATGTTGCAGTTGA
mRNA sequenceShow/hide mRNA sequence
GGTTAACGATGTATGTCCCTCCTTTTTTCTTCACTTCCTTTCTCGTTCTTTCCTTCTGAATTGCTCTCTGTTTCTCTCTTTTTGCACAAATTTACACGATAATCTTCGGA
TTTAATCGCACCATTTTCGCGATTAATCACTGTAGTCTGAAGCAGATCCGGCTGGAAATATGTCTTATGCTTACCTATTCAAATACATCGTCATCGGTGATACTGGAGTT
GGGAAATCGTGTCTTCTCCTTCAGTTTACGGATAATCGATTTCAGCCTGTTCATGACTTAACTATTGGGGTTGAATTCGGAGCCAGGATGATCACGATTGAGAATAAGCC
AATTAAGCTGCAGATTTGGGATACGGTTTTTTCCATTTTGGCAAACCTCGGTGTTTATTCAGTCAGGCCGGCCAAGAGTCATTTAGGTCCATCACAAGGTCCTACTACAG
AGGTGCCGCTGGTGCCTTGCTTGTCTATGATATTACCAGGTCTTATTTTAAGGGAGACTTTCAATCACTTGGTTAGCTGGCTAGAAGATGCAAGGCAGCATGCAAATGCA
AACATGACAATTATGCTAATTGGTAATAAGAGTGATCTTGCTCATAGAAGAGCTGTGAGCACAGAAGAGGGTGAACAGTTCGCAAAGGAGCATGGTTTAATATTCATGGA
GGCATCTGCCAAAACTGCCCAAAATGTCGAAGAGGCATTCGTAAAGACAGCCGCAACCATATTCAAGAAGATTCAAGATGGAGTATTTGACGTTTCAAATGAGGTTGACA
CCCATCTCGTATCTTTCTACTTCGATTCTTATGGAATCAAAGTTGGATATGGCGGGATACCAGGACCGTCAGGAGGCAGAGAGGGATCATCTTCCCAAGCTGGCGGATGT
TGCAGTTGAACATTGAAATTATAGAAACTAGCTGACTTCAATCTGTTTGTGCCTGCCTTAATTCATTCATTCTTTTATTCTTTTTCATCATTCCTCATGTGCTGCTGTGA
AATGTGAAGTACCCCACCCCCAACCAAAAAAAGAGTAGAAGAACCTTTGTATGTTAAAAGAAAAGGCAGGTTCTTTTAATGCTAAGCTTTCTTTCACTCTGCTATCAGTT
CAATTGTAAATCAACATTGTTTTGAATTCATTAGTTCATTTGGTGAAGAACCTTTATATAGTTCCATTTCTTGATTTTGGTTGTTTTTTATTCAATAAATGTGAAGATGG
GGATCTGACTTTCAAT
Protein sequenceShow/hide protein sequence
MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIWDTVFSILANLGVYSVRPAKSHLGPSQGPTTEVPLVPCLSMILPGLILRET
FNHLVSWLEDARQHANANMTIMLIGNKSDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSNEVDTHLVSFYFDSYGIKVGYGGI
PGPSGGREGSSSQAGGCCS